BAC Information

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BAC

Clone NameB6Ng01-096F03
Chromosome16 (Build37)
Map Location 28,307,065 - 28,308,114
singlet/doubletsinglet
Overlap geneFgf12
Upstream geneOstn, Uts2d, Ccdc50
Downstream gene1600021P15Rik, EG666717, Hrasls, Atp13a5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096F03.bB6Ng01-096F03.g
ACCDH907013DH907014
length1,0921,032
definitionDH907013|Mus musculus domesticus DNA, BAC clone: B6Ng01-096F03, 5' end.DH907014|Mus musculus domesticus DNA, BAC clone: B6Ng01-096F03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgagttattttatttttcttttactttttagattagcatcgtg
tccttaaatgtgattaattttagagtgtattactcaaactgctgatagct
agataaaatctgtatcatttgaattgaatgttctgctgatggcttcaaag
tcgattttttatgtaatgtcacttgccttgattgtttatctatggatttt
ccacatggatgatctatgtatcacggagagtggacaaattgaggttaccc
cactgttgctgtgtaagcagtaatatgtaactttatatctactagagtat
gctttatgtgattatccctacatgccttatgtgcctttagaattctaatg
tcctcttgatggttactaccttgattagtatgaaagaaccttctttacct
ctcctttcatgtggtactttagaaggatatcttggcgaccatcacattac
tgaatcttctttgctggttctatttgcttggaacactttcattcatcctt
ttcaagggactatcactctttggtgttgaggtgtgcgagtgcgtgcgtgt
gtgtgtgtgtgtgtgatgatctcgtgtgtgaccggttgtgcaagcagacg
gttaatttgtaatacacctttttgagtaaaggaagcccgcctctcggtac
gggaatcgtcattggatagagcagctgtcaatcacgctgtatataaatag
aggccgcgcggcgctccgacaggcagcgtggctcgagtcctccggtccgg
ctcgcgtggttgatcatctcctggcgtaaccttggcccgctgtggctggg
agactcatctgcaggtatctgggccttctggtccgcacggcctcccgggc
gagcggcgcgatggcggaagcggcggcggcgggcgccagcggagaaacca
tggccgcgctagtggccgcagaaggttccttgggcccggcgggctggtct
gccggccggagtttctctactacctgcgttcgagccccaaacactgggct
cagcccgagctggcgctgacgagcttctccggcattgaagggctgagctg
catgtccccagagtacctgcccaacacctgaaggactgacct
gaattctttcttctcctgccaccatccccacaccactgggactactggca
tgttttttgttactgaaaattgttaaggcacaaatactcccctttgtcac
cctgttatttaacagatccgttttcttattctaaggatgtatttttctta
tggaaatgacaaaaaaaaacatatattaggctctaaatacttttctaaag
aaaggtctaaactctgcatttagtactgctaacctcattggaaagaaaaa
ctctgaaagcttccatggcgagtattatgaaaggaatggagtatatgtga
gaaaggtttatattttatgtaacattattggggcagcactctatgcccca
ctgataccccaacttgacaccattaacaacatctgggcccaatgttcata
tatacttgaggacccttatggactgagccgcagataagtcagataacttg
gaagcagatgtaagtagaagccaggcttttcttgtctctgcttccctctc
taaccaagattacaaggtcagagtttcttagttaatattcattgaattag
gcttttttccccctactttgctattttttagctaataaatagctaaaaac
ttctcaatagcttctttcacgtggcttaacaggtcattcactgtaaagtg
cataagcagttagtaaacatgacgttttctttgctttgctgttatttatt
cttgctatgtcttactacacacacttcatagcgagacacttgcctctgag
ttctccattataaactcagcaaatgcccacagtgaatatatgatgttatt
gaccaggagcttttatattggagaattttttttttttttttttttttttc
accttgctctgccttgccaggggagaatttaaaggaagatttattctgca
atttcagtgactcactgtacacaggaatgatccacattcattttactgtt
ctttatttttttcagcttatcttttagagtatatagttgttcacagaagt
attaagatgtgttactgagcatctatttgggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_28307065_28308114
seq2: B6Ng01-096F03.g_68_1099 (reverse)

seq1  ACCCAAAATAGATGCCTCAAGGTTAACACATCCTAATTACCTTCTGTGAC  50
      |||| ||||||||| ||||    ||||||||| ||||   ||||||||| 
seq2  ACCC-AAATAGATG-CTCA---GTAACACATCTTAAT--ACTTCTGTGAA  43

seq1  AACCTATATACTCTTTAAAAAGATAAGCCTGAAAAAAAATAAAGACAGGT  100
       | |||||||||||   |||||||||| ||| |||||||||||||   ||
seq2  CAACTATATACTCT---AAAAGATAAG-CTG-AAAAAAATAAAGAACAGT  88

seq1  AAAATGAATGTGGATCATTTCCTGTGTCCAGTGAGTCACTGAAATTGCAG  150
      ||||||||||||||||| ||||||||| ||||||||||||||||||||||
seq2  AAAATGAATGTGGATCA-TTCCTGTGTACAGTGAGTCACTGAAATTGCAG  137

seq1  GATAAATCTTGCCTTTACATTCTCACCTGGCAAGGCAGAGCAAGGTAAAA  200
       ||||||||| |||||| |||||| |||||||||||||||||||||    
seq2  AATAAATCTT-CCTTTAAATTCTCCCCTGGCAAGGCAGAGCAAGGT----  182

seq1  AAAAAAAAAAAAAAAAAAAAAAAAATTCTCCAATATAAAAGCTCCTGGTC  250
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAAAAAAAAAAAAAAAAAATTCTCCAATATAAAAGCTCCTGGTC  232

seq1  AATAACATCATATATTCACTGTGGGCATTTGCTGAGTTTATAATGGAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACATCATATATTCACTGTGGGCATTTGCTGAGTTTATAATGGAGAA  282

seq1  CTCAGAGGCAAGTGTCTCGCTATGAAGTGTGTGTAGTAAGACATAGCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAGGCAAGTGTCTCGCTATGAAGTGTGTGTAGTAAGACATAGCAAG  332

seq1  AATAAATAACAGCAAAGCAAAGAAAACGTCATGTTTACTAACTGCTTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAACAGCAAAGCAAAGAAAACGTCATGTTTACTAACTGCTTATG  382

seq1  CACTTTACAGTGAATGACCTGTTAAGCCACGTGAAAGAAGCTATTGAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTACAGTGAATGACCTGTTAAGCCACGTGAAAGAAGCTATTGAGAA  432

seq1  GTTTTTAGCTATTTATTAGCTAAAAAATAGCAAAGTAGGGGGAAAAAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTAGCTATTTATTAGCTAAAAAATAGCAAAGTAGGGGGAAAAAAGC  482

seq1  CTAATTCAATGAATATTAACTAAGAAACTCTGACCTTGTAATCTTGGTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTCAATGAATATTAACTAAGAAACTCTGACCTTGTAATCTTGGTTA  532

seq1  GAGAGGGAAGCAGAGACAAGAAAAGCCTGGCTTCTACTTACATCTGCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGGAAGCAGAGACAAGAAAAGCCTGGCTTCTACTTACATCTGCTTC  582

seq1  CAAGTTATCTGACTTATCTGCGGCTCAGTCCATAAGGGTCCTCAAGTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTATCTGACTTATCTGCGGCTCAGTCCATAAGGGTCCTCAAGTATA  632

seq1  TATGAACATTGGGCCCAGATGTTGTTAATGGTGTCAAGTTGGGGTATCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAACATTGGGCCCAGATGTTGTTAATGGTGTCAAGTTGGGGTATCAG  682

seq1  TGGGGCATAGAGTGCTGCCCCAATAATGTTACATAAAATATAAACCTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCATAGAGTGCTGCCCCAATAATGTTACATAAAATATAAACCTTTC  732

seq1  TCACATATACTCCATTCCTTTCATAATACTCGCCATGGAAGCTTTCAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATATACTCCATTCCTTTCATAATACTCGCCATGGAAGCTTTCAGAG  782

seq1  TTTTTCTTTCCAATGAGGTTAGCAGTACTAAATGCAGAGTTTAGACCTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTTCCAATGAGGTTAGCAGTACTAAATGCAGAGTTTAGACCTTT  832

seq1  CTTTAGAAAAGTATTTAGAGCCTAATATATGTTTCTTTTTCTCATTCTTA  900
      |||||||||||||||||||||||||||||||||| ||||| |||||   |
seq2  CTTTAGAAAAGTATTTAGAGCCTAATATATGTTTTTTTTTGTCATTTCCA  882

seq1  TAAGAAAAATACATCCTTAGAATAAGAAAACGGATCTGTTAAATAACAGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAAATACATCCTTAGAATAAGAAAACGGATCTGTTAAATAACAGG  932

seq1  GTGATAAAGCTGAGTATTTGTGCTTTAACAATTTTCAGTAACACTAAACA  1000
      |||| ||||  |||||||||||| |||||||||||||||||||  |||||
seq2  GTGACAAAGGGGAGTATTTGTGCCTTAACAATTTTCAGTAACAAAAAACA  982

seq1  TGCCTGTAGTCCCAGTGCTGTGGGGATGGTGGCAGGAGAATAAAGAATTC  1050
      |||| |||||||||||| |||||||||||||||||||||| |||||||||
seq2  TGCCAGTAGTCCCAGTGGTGTGGGGATGGTGGCAGGAGAAGAAAGAATTC  1032