BAC Information

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BAC

Clone NameB6Ng01-097N15
Chromosome16 (Build37)
Map Location 67,482,870 - 67,483,931
singlet/doubletsinglet
Overlap geneCadm2
Upstream gene9330155M09Rik
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097N15.bB6Ng01-097N15.g
ACCDH908110DH908111
length1,2401,065
definitionDH908110|Mus musculus domesticus DNA, BAC clone: B6Ng01-097N15, 5' end.DH908111|Mus musculus domesticus DNA, BAC clone: B6Ng01-097N15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatgtgtttcagaatcaatgagtcacctagccttggttgtatcc
aaaatatacaaataggtgatggatgatggctgttcttagttgtcaacttg
actagagctgagcatacctttaggggttctatttatgttttgttcttttg
gattggctcttttgagtgtgaagacccacctgaaatctggatcattgaag
gttgaaagacccctccctgatgggggatacactttctgaaggcagcccac
ataaaaccgcatggaagaagagagctttgctttctttctgtctctgtgcc
ctcatttgtgctggcaaacctgcctgccctattgctgagacgttcatttg
ctggtgttagaacatacatcttcaggattcagacacagactaaagagcaa
cagttctctggaattccaggcccagactggaactgttgacaccttcaggc
acacgaggtggacaactatcagattctcgacctttcctccaggagacatc
tatttgtgggactcctggaactacaacctctaagtcactcgaataaatca
aacacacttgtattcatcctatcagttgcattcctctagagagccctgat
tcataaacactggattattatgacaccatgatacaactttaatgataaag
acatttatcccatgagtaatgaaagaaaatagtttcttgatatataatct
actaatgataagcagtggtaaaataacagtttatactattacataaaata
acagcattctcaatttgaaatgattcactcctctgttaacaaaagtttta
cagtagataaataaaatgttcccaagaacacgacacatgctacagagaaa
ttttttcaataaaactgacttgattgttgcaatctcttggcagatttgtt
tgtgaatttttaaagtaggatataattgtttaaacagaaggctggtgagt
ttaaagccagcatgagctataaagtaaagttgatccaaaaatattacaaa
gggtatgaaaaaataaatattaaaaagtatagaatgtgaaatcattatta
tttactgcacagctgtgccagctaccacaacccttgtttgaaccaataac
tggatgaatgaatctcacaactaaaagttacaacttttgggtctagagaa
atattactattttagaatgaaatatttacttagggaattacacttgaatt
gacttataacatttataaaattgaatagaagataacgccg
gaattctttcgcagtgtgagtgcttagaaaaccaaaagtacagcattgct
attagcgctgactttgtaacaagaaaagcctgaggaagtcagaaaacaga
gcagctctgcagaccagtggtggaaagaatgacgcctttcacatcatgca
gtacatttcaaaactgaaaactgacaatcggcgagagtggagaacagcag
gctggataataattggagacttcattgaatgctaatgactaagccagtgc
aacagcaaaagtatttaaggaaggcagaaacccgatcgatcattataggt
ttatttttaacaggctagttcttttcatatgctcttaaattgaattctaa
catccttctctgtttctccggaacacatgctgtgacactgtgtgtcagtg
aagcacatacacctataagagtttctgtttaaatacctttatttttcttc
cttaatcgtttacttaggaattggagaatcaaagaagaaatacaaaatga
agggaaaaacctgaaatttctcagaagtatttctcctcctggatatgaat
accaaacaacaaccactatgacaacggtgacgactactactaacgctaca
acaaaaaaaaagttagattttgactttttttgtagctggctttgagttgt
tccaaatatctatgccatatgacactagaaaggactgaataaaggagttt
cacacttgctgtctctttcccgcttcaaaaattattttactatattcatt
catttgcatatgtgagtacaggtagacatgcatcacgccaagcatgtgaa
agtcaggaaaacatgccagactctgtctcttcagggctttaaaggataaa
aagttaggtacccagtctggacaggaagagctttaaattgctgactcatc
tccctggctttaataattgtcttttttaatttgtaaaggattttagctct
gactgaagaaatgttcctcatgataatagcatctgtaacttcttgcagag
acctggggttccaattccaagctgcataggatggctgacgtggcttggaa
ctttagccaccaggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_67482870_67483931
seq2: B6Ng01-097N15.g_71_1135

seq1  GAATTCTTTCGCAGTGTGAGTGCTTAGAAAACCAAAAGTACAGCATTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCGCAGTGTGAGTGCTTAGAAAACCAAAAGTACAGCATTGCT  50

seq1  ATTAGCGCTGACTTTGTAACAAGAAAAGCCTGAGGAAGTCAGAAAACAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCGCTGACTTTGTAACAAGAAAAGCCTGAGGAAGTCAGAAAACAGA  100

seq1  GCAGCTCTGCAGACCAGTGGTGGAAAGAATGACGCCTTTCACATCATGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTCTGCAGACCAGTGGTGGAAAGAATGACGCCTTTCACATCATGCA  150

seq1  GTACATTTCAAAACTGAAAACTGACAATCGGCGAGAGTGGAGAACAGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATTTCAAAACTGAAAACTGACAATCGGCGAGAGTGGAGAACAGCAG  200

seq1  GCTGGATAATAATTGGAGACTTCATTGAATGCTAATGACTAAGCCAGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGATAATAATTGGAGACTTCATTGAATGCTAATGACTAAGCCAGTGC  250

seq1  AACAGCAAAAGTATTTAAGGAAGGCAGAAACCCGATCGATCATTATAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCAAAAGTATTTAAGGAAGGCAGAAACCCGATCGATCATTATAGGT  300

seq1  TTATTTTTAACAGGCTAGTTCTTTTCATATGCTCTTAAATTGAATTCTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTAACAGGCTAGTTCTTTTCATATGCTCTTAAATTGAATTCTAA  350

seq1  CATCCTTCTCTGTTTCTCCGGAACACATGCTGTGACACTGTGTGTCAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTCTCTGTTTCTCCGGAACACATGCTGTGACACTGTGTGTCAGTG  400

seq1  AAGCACATACACCTATAAGAGTTTCTGTTTAAATACCTTTATTTTTCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACATACACCTATAAGAGTTTCTGTTTAAATACCTTTATTTTTCTTC  450

seq1  CTTAATCGTTTACTTAGGAATTGGAGAATCAAAGAAGAAATACAAAATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATCGTTTACTTAGGAATTGGAGAATCAAAGAAGAAATACAAAATGA  500

seq1  AGGGAAAAACCTGAAATTTCTCAGAAGTATTTCTCCTCCTGGATATGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAAAACCTGAAATTTCTCAGAAGTATTTCTCCTCCTGGATATGAAT  550

seq1  ACCAAACAACAACCACTATGACAACGGTGACGACTACTACTAACGCTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAACAACAACCACTATGACAACGGTGACGACTACTACTAACGCTACA  600

seq1  ACAAAAAAAAAGTTAGATTTTGACTTTTTTTGTAGCTGGCTTTGAGTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAAAAAGTTAGATTTTGACTTTTTTTGTAGCTGGCTTTGAGTTGT  650

seq1  TCCAAATATCTATGCCATATGACACTAGAAAGGACTGAATAAAGGAGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAATATCTATGCCATATGACACTAGAAAGGACTGAATAAAGGAGTTT  700

seq1  CACACTTGCTGTCTCTTTCCCGCTTCAAAAATTATTTTACTATATTCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTGCTGTCTCTTTCCCGCTTCAAAAATTATTTTACTATATTCATT  750

seq1  CATTTGCATATGTGAGTACAGGTAGACATGCATCACGCCAAGCATGTGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGCATATGTGAGTACAGGTAGACATGCATCACGCCAAGCATGTGAA  800

seq1  AGTCAGGAAAACATGCCAGACTCTGTCTCTTCAGGGCTTT-AAGGATAAA  849
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGTCAGGAAAACATGCCAGACTCTGTCTCTTCAGGGCTTTAAAGGATAAA  850

seq1  AAGTTAGGTACCCAGTCTGGACAGGAAGAGCTTTAAATTGCTGACTCATC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAGGTACCCAGTCTGGACAGGAAGAGCTTTAAATTGCTGACTCATC  900

seq1  TCCCTGGCTTTAATAATTGTCTTTTTTAATTTGTAAAGGATTTTAGCTCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGGCTTTAATAATTGTCTTTTTTAATTTGTAAAGGATTTTAGCTCT  950

seq1  GACTGAAGAAATGTTCCTCATGATAATAGCATCTGTAAC-TCTTGCAGGA  998
      ||||||||||||||||||||||||||||||||||||||| ||||||| ||
seq2  GACTGAAGAAATGTTCCTCATGATAATAGCATCTGTAACTTCTTGCA-GA  999

seq1  GACCTGGG--TTCAATTCCAAGCTTGCATAGGATGGCTGACGTGGCTTGG  1046
      ||||||||  | ||||||||||| ||||||||||||||||||||||||||
seq2  GACCTGGGGTTCCAATTCCAAGC-TGCATAGGATGGCTGACGTGGCTTGG  1048

seq1  AACTTCAG-CACCAGGC  1062
      ||||| || ||||||||
seq2  AACTTTAGCCACCAGGC  1065