BAC Information

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BAC

Clone NameB6Ng01-099K01
Chromosome16 (Build37)
Map Location 55,089,058 - 55,090,178
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043442, LOC100043449, LOC667927, LOC436421
Downstream geneZpld1, Nfkbiz, Gm1752, Lrriq2, EG667966, LOC629242, Rpl24, Zbtb11, Pcnp, Rg9mtd1, Senp7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099K01.bB6Ng01-099K01.g
ACCDH909370DH909371
length1,136702
definitionDH909370|Mus musculus domesticus DNA, BAC clone: B6Ng01-099K01, 5' end.DH909371|Mus musculus domesticus DNA, BAC clone: B6Ng01-099K01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattaaatattacatttatttataagatacttttaatatcttata
tggcttttaggcaaaacacagtatcccttatgaaaataacacacatcgtg
aaattgcatacctaagataatgaattaactaattttctatatgatcctga
aatgataggatttcttttttagaagaaaattttttctttggtataaaaac
taatactgttacagtagttgtgacaggtaaggtaatgaccttttacagag
gtgcatgccctagtcatcaaacactctgaatatactattacagggaaaag
agaaatgagattgcacatgagttcaaatatctaatctttatgacattcca
ccaaagaaatcaatttctttaaaagagagattgtcttggtttatgtaggt
ggtctcaatcattacatcacactgatgtttttaataatcacttcctagtt
tagaatccttgatagaaagaagtgagtcacaagccaaggagcatagaagg
actatcccatagaaagtgcagacagtcctcagttcatagcacaaagaacc
aaattctattaaaaatctggataaactagcatatctttctcagatcttct
tgacctgaaaaaaaaaaacaaaaaaaacaaaaaaacaacaaaaaaaacaa
acaaaaaaacaacaacaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacag
tggttgacaacagctgaagcttgtttttgtcctgagttttaaatatacag
aactgtaagataataagtttgtgctgtcattaaatctatggttatctatg
atgaccccacagaaaaaattatatattattctatattcagtaaacatcta
ctttggaaggtgaaactaaatgacttttgagaaatgagagccactgttgg
tggggactgtagttggtcctgtagttgaccatcacaagaccaaaacttag
gcatatcagaagggacttaggtgtgccactttttaaaaatggtgatgtgg
taactaaaagtctctaagtcaggtatttcacagagggtatattttaggaa
ttaattcattggtcaatggaactacctcttatacacctcataaggacatt
cctgcaactaattcaatggctcgagtttatcatttt

gaattccctgaaggatcttctatgtttctttcccaccataaataaaacat
atttgcaagcatcttttcacatgtgtgatgattaatatgatagtgaccca
ctcttaagtctataaattctgtgaatgtaagcaccatgcctactttgctc
accactgcgcctaaggaactttgggtgttaaacttaaataaaaatgtttg
ataattacttgtaataggcaaagagtgaacggattggcataaaaatttaa
aatagtgaaaaattcttataaagtcttgttcaccaagacacggatacttt
atgtcaaagtgcttgctgacaggagcctgatagagctgtctcctgagagg
ctctgtcagagtttgaccaatacagtagtggattcttgcagccaaccatc
ggactgagcacagggaccacaaaagaggagttagtagaaggactgaagga
gctgaatgggtttgcaaccccataagaagaacaacaatataaccaaacag
accctccagagctcccaaggactaaaccaccaaccaaagagtacacacag
agggaccaatggctacagctgtatatgaagccgaggattgccttatctgg
catcaattgaggggatgcccttggtcctgtgaaggcttgatgtcctagca
taggggaatgccagggcactgaggtggaaaagggtgagtgggtgggggag
aa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_55089058_55090178
seq2: B6Ng01-099K01.b_46_1181

seq1  GAATTCATTAAATATTACATTTATTTATAAGATACTTTTAATATCTTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAAATATTACATTTATTTATAAGATACTTTTAATATCTTATA  50

seq1  TGGCTTTTAGGCAAAACACAGTATCCCTTATGAAAATAACACACATCGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTTAGGCAAAACACAGTATCCCTTATGAAAATAACACACATCGTG  100

seq1  AAATTGCATACCTAAGATAATGAATTAACTAATTTTCTATATGATCCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGCATACCTAAGATAATGAATTAACTAATTTTCTATATGATCCTGA  150

seq1  AATGATAGGATTTCTTTTTTAGAAGAAAATTTTTTCTTTGGTATAAAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATAGGATTTCTTTTTTAGAAGAAAATTTTTTCTTTGGTATAAAAAC  200

seq1  TAATACTGTTACAGTAGTTGTGACAGGTAAGGTAATGACCTTTTACAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACTGTTACAGTAGTTGTGACAGGTAAGGTAATGACCTTTTACAGAG  250

seq1  GTGCATGCCCTAGTCATCAAACACTCTGAATATACTATTACAGGGAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATGCCCTAGTCATCAAACACTCTGAATATACTATTACAGGGAAAAG  300

seq1  AGAAATGAGATTGCACATGAGTTCAAATATCTAATCTTTATGACATTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGAGATTGCACATGAGTTCAAATATCTAATCTTTATGACATTCCA  350

seq1  CCAAAGAAATCAATTTCTTTAAAAGAGAGATTGTCTTGGTTTATGTAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGAAATCAATTTCTTTAAAAGAGAGATTGTCTTGGTTTATGTAGGT  400

seq1  GGTCTCAATCATTACATCACACTGATGTTTTTAATAATCACTTCCTAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCAATCATTACATCACACTGATGTTTTTAATAATCACTTCCTAGTT  450

seq1  TAGAATCCTTGATAGAAAGAAGTGAGTCACAAGCCAAGGAGCATAGAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATCCTTGATAGAAAGAAGTGAGTCACAAGCCAAGGAGCATAGAAGG  500

seq1  ACTATCCCATAGAAAGTGCAGACAGTCCTCAGTTCATAGCACAAAGAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCCCATAGAAAGTGCAGACAGTCCTCAGTTCATAGCACAAAGAACC  550

seq1  AAATTCTATTAAAAATCTGGATAAACTAGCATATCTTTCTCAGATCTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTATTAAAAATCTGGATAAACTAGCATATCTTTCTCAGATCTTCT  600

seq1  TGACCTGAAAAAAAAAAACAAAAAAAACAAAAAAACAACAAAAAAAACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTGAAAAAAAAAAACAAAAAAAACAAAAAAACAACAAAAAAAACAA  650

seq1  ACAAAAAAACAACAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAAACAACAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAG  700

seq1  TGGTTGACAACAGCTGAAGCTTGTTTTTGTCCTGAGTTTTAAATATACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGACAACAGCTGAAGCTTGTTTTTGTCCTGAGTTTTAAATATACAG  750

seq1  AACTGTAAGATAATAAGTTTGTGCTGTCATTAAATCTATGGTTATCTATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTAAGATAATAAGTTTGTGCTGTCATTAAATCTATGGTTATCTATG  800

seq1  ATGACACCACAG-AAAAATTATATATTATTCTATATTCAGTAAACATCTA  849
      ||||| |||||| |||||||||||||||||||||||||||||||||||||
seq2  ATGACCCCACAGAAAAAATTATATATTATTCTATATTCAGTAAACATCTA  850

seq1  CTTTGGAAGGTGAAACTAAATGAC-TTTGAGAAATGAGAGCCACTGTTGG  898
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CTTTGGAAGGTGAAACTAAATGACTTTTGAGAAATGAGAGCCACTGTTGG  900

seq1  T-GGGACTGTAGTTGGT-CTGTAGTTGACCATCACAAGACCAAAAC-TAG  945
      | ||||||||||||||| |||||||||||||||||||||||||||| |||
seq2  TGGGGACTGTAGTTGGTCCTGTAGTTGACCATCACAAGACCAAAACTTAG  950

seq1  GCATATCAGA--GGACCTAGTTGTGCCACTTTT--AAAATGTGAATGT-G  990
      ||||||||||  |||| ||| ||||||||||||  ||||||   |||| |
seq2  GCATATCAGAAGGGACTTAGGTGTGCCACTTTTTAAAAATGGTGATGTGG  1000

seq1  TAACTAAAAGTCTCTAAGTCA-GTATTTCACAGA-GGTATATTTTA-GAA  1037
      ||||||||||||||||||||| |||||||||||| ||||||||||| |||
seq2  TAACTAAAAGTCTCTAAGTCAGGTATTTCACAGAGGGTATATTTTAGGAA  1050

seq1  TATATTCATT-GTACATGGTACTA-CTCTTATACA-CTCATAAAGACAAT  1084
      |  ||||||| ||  |||| |||| |||||||||| ||||||| ||||  
seq2  TTAATTCATTGGTCAATGGAACTACCTCTTATACACCTCATAAGGACA--  1098

seq1  CTCTTTCAACTAA-TCCATGCCTCAGTTTTATCATTTT  1121
       || | ||||||| || ||| |||   |||||||||||
seq2  TTCCTGCAACTAATTCAATGGCTCGAGTTTATCATTTT  1136


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