BAC Information

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BAC

Clone NameB6Ng01-099P24
Chromosome16 (Build37)
Map Location 72,798,585 - 72,799,604
singlet/doubletsinglet
Overlap geneRobo1
Upstream genenone
Downstream geneLOC100039310, LOC100039318, LOC100039326
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099P24.bB6Ng01-099P24.g
ACCDH909631DH909632
length1,1591,030
definitionDH909631|Mus musculus domesticus DNA, BAC clone: B6Ng01-099P24, 5' end.DH909632|Mus musculus domesticus DNA, BAC clone: B6Ng01-099P24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacttggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatcgaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatatagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacggtcagctaatgggatggatcacagggctccc
aatggaggagctagagaaagtacccaagggagctaaagggatctttcaac
cctataggtggaacaactattatgaacctaccagtacccctgaacccttt
gactctagctgcatatgtatcaaagatgtctagtcgctatcactgagaga
ttcatggactcgctgactttggtgccgttcaggttcgccaaggcaagggg
gggatgtga
gaattcactttgatatttatgtgtacttgagccatatttgttcatctctt
ggaaaataatatgagttgaaaaactggatttttttttcctcaaagccagg
cattttgtggcctttgcctataatcccagcattcctgggggtgatgcagg
aagactgtagagggtttgagggtacccctgtggatagaaagtgcatccag
cctgggctaaagaatcagatcctattccaaaatgaggaaagaaacccaga
gagtagatacgagctacctctcctgactcttggctttcggggtctcaagg
cttaactaccatccgaacaagcctgctactttctaatatacagacagaca
cagggcaatatctggagatgcttctgcggcaagggaaaccacgtgattcc
agggagaaaagtaaaggttatgcggtcttttgatacagaaacatgaacag
agaggggcggggagggagagacagacagacagacagacacagagcaacag
agacacagagggatatgaactatgacccttaccaaaccggtaagcagtgg
agactgaacacagtcatcgaagttgacacagtcatcccagaatcctctgt
cctccagtgaccacgtgaacacccaccacacactcagcccatcctggact
gccttcccttctgtttctgcccgcttctcacaactcatacgctctcttca
aaacacaacaagctgttttgagctgacatttcgagagcagacggccaccc
tgcagaatgttctgccaaatgcctcttctccctgggagtctttctgtcac
ctcaaggggaatggccacattttctttctacactttccctatccccacta
ccaaactgtcagtttatctacgcttagctcttcaccttccatctttctct
ccccactctcctttaactgtctttgcctagtaatgcactcagtccgagca
tgtaatttttggccaaacacttaaagatagctcggttctccttttaccct
taatgaaaatgtcacttcaattctttggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_72798585_72799604
seq2: B6Ng01-099P24.g_71_1099 (reverse)

seq1  TCCAAAGAATGGAAGTGACATTCT-AT--AGGGTAAA--GAGAACAG-GC  44
      |||||||||| ||||||||||| | ||  ||||||||  |||||| | ||
seq2  TCCAAAGAATTGAAGTGACATTTTCATTAAGGGTAAAAGGAGAACCGAGC  50

seq1  TATCTTTAAGTGTCTGGCCAAAA--TACATGCTCGGACTGAGTGCATACG  92
      ||||||||||||| |||||||||  ||||||||||||||||||||||   
seq2  TATCTTTAAGTGTTTGGCCAAAAATTACATGCTCGGACTGAGTGCATTAC  100

seq1  TAGGCAAAGACAGTTAAAGGAGAGTGGGGAGGAGAAAGATGGAAGGTGAA  142
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TAGGCAAAGACAGTTAAAGGAGAGTGGGGA-GAGAAAGATGGAAGGTGAA  149

seq1  GAGCTAAGCGTAGATAAACTGACAGTTTGGTAGTGGGGATAGGG-AAGTG  191
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GAGCTAAGCGTAGATAAACTGACAGTTTGGTAGTGGGGATAGGGAAAGTG  199

seq1  TAGAAAGAAAATGTGGCCATTCCCCTTGAGGTGACAGAAAGACT-CCAGG  240
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TAGAAAGAAAATGTGGCCATTCCCCTTGAGGTGACAGAAAGACTCCCAGG  249

seq1  GAGAAGAGGCATTTGGCAGAACATTCTGCAGGGTGGCCGTCTGCTCTCGA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGAGGCATTTGGCAGAACATTCTGCAGGGTGGCCGTCTGCTCTCGA  299

seq1  AATGTCAGCTCAAAACAGCTTGTTGTGTTTTGAAGAGAGCGTATGAGTTG  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCAGCTCAAAACAGCTTGTTGTGTTTTGAAGAGAGCGTATGAGTTG  349

seq1  TGAGAAGCGGGCAGAAACAGAAGGGAAGGCAGTCCAGGATGGGCTGAGTG  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGCGGGCAGAAACAGAAGGGAAGGCAGTCCAGGATGGGCTGAGTG  399

seq1  TGTGGTGGGTGTTCACGTGGTCACTGGAGGACAGAGGATTCTGGGATGAC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGGGTGTTCACGTGGTCACTGGAGGACAGAGGATTCTGGGATGAC  449

seq1  TGTGTCAACTTCGATGACTGTGTTCAGTCTCCACTGCTTACCGGTTTGGT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCAACTTCGATGACTGTGTTCAGTCTCCACTGCTTACCGGTTTGGT  499

seq1  AAGGGTCATAGTTCATATCCCTCTGTGTCTCTGTTGCTCTGTGTCTGTCT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTCATAGTTCATATCCCTCTGTGTCTCTGTTGCTCTGTGTCTGTCT  549

seq1  GTCTGTCTGTCTCTCCCTCCCCGCCCCTCTCTGTTCATGTTTCTGTATCA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTCTGTCTCTCCCTCCCCGCCCCTCTCTGTTCATGTTTCTGTATCA  599

seq1  AAAGACCGCATAACCTTTACTTTTCTCCCTGGAATCACGTGGTTTCCCTT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACCGCATAACCTTTACTTTTCTCCCTGGAATCACGTGGTTTCCCTT  649

seq1  GCCGCAGAAGCATCTCCAGATATTGCCCTGTGTCTGTCTGTATATTAGAA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCAGAAGCATCTCCAGATATTGCCCTGTGTCTGTCTGTATATTAGAA  699

seq1  AGTAGCAGGCTTGTTCGGATGGTAGTTAAGCCTTGAGACCCCGAAAGCCA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCAGGCTTGTTCGGATGGTAGTTAAGCCTTGAGACCCCGAAAGCCA  749

seq1  AGAGTCAGGAGAGGTAGCTCGTATCTACTCTCTGGGTTTCTTTCCTCATT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCAGGAGAGGTAGCTCGTATCTACTCTCTGGGTTTCTTTCCTCATT  799

seq1  TTGGAATAGGATCTGATTCTTTAGCCCAGGCTGGATGCACTTTCTATCCA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAATAGGATCTGATTCTTTAGCCCAGGCTGGATGCACTTTCTATCCA  849

seq1  CAGGGGTACCCTCAAACCCTCTACAGTCTTCCTGCATCACCCCCAGGAAT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGTACCCTCAAACCCTCTACAGTCTTCCTGCATCACCCCCAGGAAT  899

seq1  GCTGGGATTATAGGCAAAGGCCACAAAATGCCTGGCTTTGAGGAAAAAAA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGATTATAGGCAAAGGCCACAAAATGCCTGGCTTTGAGGAAAAAAA  949

seq1  AATCCAGTTTTTCAACTCATATTATTTTCCAAGAGATGAACAAATATGGC  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAGTTTTTCAACTCATATTATTTTCCAAGAGATGAACAAATATGGC  999

seq1  TCAAGTACACATAAATATCAAAGTGAATTC  1020
      ||||||||||||||||||||||||||||||
seq2  TCAAGTACACATAAATATCAAAGTGAATTC  1029