BAC Information

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BAC

Clone NameB6Ng01-100K13
Chromosome16 (Build37)
Map Location 66,595,974 - 66,596,822
singlet/doubletsinglet
Overlap genenone
Upstream geneEG383186, Vgll3, LOC664846, LOC100039035
Downstream geneCadm2, 9330155M09Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100K13.bB6Ng01-100K13.g
ACCDH910091DH910092
length1,171849
definitionDH910091|Mus musculus domesticus DNA, BAC clone: B6Ng01-100K13, 5' end.DH910092|Mus musculus domesticus DNA, BAC clone: B6Ng01-100K13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
cttagcatccttaatcatcagagaaatgcaaatccaaacaatcctgagat
tccatctcacaccagtcagaatggctaagattaaaaattcaggtaacagc
agatgctggcaaggatgtgaagaaataggaagactcctccgttgttggtg
ggattgcaagctcatacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactataggatgatcctgtaatacctcttctgggc
atatatccagaaaatattccaactggtaagaaggacatgctccactatgt
tcatagcagccttatttataatagccagaagctggaaagaaccaagatgc
ccctcaacagaggaatggatacaaaaatatggtacatttacacaatggag
tactactcagttattaaaaggaatgaatttgtaaaattcctaggcaaatg
gttggacctcgaggacatcatcctgagtgaggtaacacagtcacaaaaga
actcaaatgatatgtactcactgataagtggatattagcccagaaactta
tgatatccaagatataagatacaatttgcaaaacacatgaaactgaagaa
gaacgaagaccaaagtgtggacactttgccccttcttagaattgggaaca
atcacccatggaaagagttacagagacaaagttcggagcagagacaaacg
gatggacatctagagactgccatatccagtgatccaccccataatcagcc
tccaaaggatgacaccaatgcatacactagcaagcgtttgctgaaaggac
cctgatatagctatcttttgtgagactatgccagggcctagcaaacacat
aagtggatgctcacagtcagctattgggttggatcacagggccccaatgg
agtagctagagaacgtatccaaggagctaaagagatctgcaatcctgtag
tgcaacaacattatgactaaccagtaccctggatctcttgactgtaactg
catatgtatcaaagatgcctactagacatcactgggaagagagggtcatt
ggacttgcaaactttatttgctccaatacaggggacgccaggcaaaagtg
gggatgtgggtgatatgagac
gaattcttttggtgatgcagcccagaatgctaaataatccaacactgtgg
tagtgttatgaagtaggacaagaggattaaactttaagatgggcaaagac
gatgctttgaggctatgtattactctatgcctgggtgatatatatgatat
ttcttctcttaaatatttttctttagatacacactatgcatataactata
tatgtacgtatgaacatctatgtgcattatcttttcctgatacaatagga
atgtgtttaccatgttgaaataaacatggggtttcatatagtataaagcc
ttatcagaattcatggcaatgaaatttcatcccactttatgtatcagatc
caaactgtatagattttaaaaatgatttatatcacattcagagacctttg
ctttcaagccaaatcagagtccgaacagagaaactttcataataacctag
acagtcataataacctaaactgatatgaacattcacattcatgtgttaat
atgacttcattactatattttacataaaatattttctcagatatatcatc
tttactaattagatgacaagtgtaaacaaaataggcacattttataacaa
gaaatataatcttattaatgaagtcttctttgaatcaagcatgacatcaa
atatctgttctagtaaaacactttagcttacaatcttatagtgtttaaaa
tctaaggggcacatatgaatttacatagttatagataattcactattcat
ttaaatctgccattgatttatctatcacacacactatccaaaggagtaga
tccagaggggaggggaggtgtgaaggaactaggaggaggagagggaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_66595974_66596822
seq2: B6Ng01-100K13.g_67_915 (reverse)

seq1  CCCTCCCTCTCCTCCTCCTAGTTCCTTCACACCTCCCCTCCCCTCTGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCTCTCCTCCTCCTAGTTCCTTCACACCTCCCCTCCCCTCTGGAT  50

seq1  CTACTCCTTTGGATAGTGTGTGTGATAGATAAATCAATGGCAGATTTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCCTTTGGATAGTGTGTGTGATAGATAAATCAATGGCAGATTTAAA  100

seq1  TGAATAGTGAATTATCTATAACTATGTAAATTCATATGTGCCCCTTAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAGTGAATTATCTATAACTATGTAAATTCATATGTGCCCCTTAGAT  150

seq1  TTTAAACACTATAAGATTGTAAGCTAAAGTGTTTTACTAGAACAGATATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACACTATAAGATTGTAAGCTAAAGTGTTTTACTAGAACAGATATT  200

seq1  TGATGTCATGCTTGATTCAAAGAAGACTTCATTAATAAGATTATATTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTCATGCTTGATTCAAAGAAGACTTCATTAATAAGATTATATTTCT  250

seq1  TGTTATAAAATGTGCCTATTTTGTTTACACTTGTCATCTAATTAGTAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATAAAATGTGCCTATTTTGTTTACACTTGTCATCTAATTAGTAAAG  300

seq1  ATGATATATCTGAGAAAATATTTTATGTAAAATATAGTAATGAAGTCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATATATCTGAGAAAATATTTTATGTAAAATATAGTAATGAAGTCATA  350

seq1  TTAACACATGAATGTGAATGTTCATATCAGTTTAGGTTATTATGACTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACACATGAATGTGAATGTTCATATCAGTTTAGGTTATTATGACTGTC  400

seq1  TAGGTTATTATGAAAGTTTCTCTGTTCGGACTCTGATTTGGCTTGAAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTATTATGAAAGTTTCTCTGTTCGGACTCTGATTTGGCTTGAAAGC  450

seq1  AAAGGTCTCTGAATGTGATATAAATCATTTTTAAAATCTATACAGTTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTCTCTGAATGTGATATAAATCATTTTTAAAATCTATACAGTTTGG  500

seq1  ATCTGATACATAAAGTGGGATGAAATTTCATTGCCATGAATTCTGATAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGATACATAAAGTGGGATGAAATTTCATTGCCATGAATTCTGATAAG  550

seq1  GCTTTATACTATATGAAACCCCATGTTTATTTCAACATGGTAAACACATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTATACTATATGAAACCCCATGTTTATTTCAACATGGTAAACACATT  600

seq1  CCTATTGTATCAGGAAAAGATAATGCACATAGATGTTCATACGTACATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTGTATCAGGAAAAGATAATGCACATAGATGTTCATACGTACATAT  650

seq1  ATAGTTATATGCATAGTGTGTATCTAAAGAAAAATATTTAAGAGAAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTATATGCATAGTGTGTATCTAAAGAAAAATATTTAAGAGAAGAAA  700

seq1  TATCATATATATCACCCAGGCATAGAGTAATACATAGCCTCAAAGCATCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATATATATCACCCAGGCATAGAGTAATACATAGCCTCAAAGCATCG  750

seq1  TCTTTGCCCATCTTAAAGTTTAATCCTCTTGTCCTACTTCATAACACTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCCCATCTTAAAGTTTAATCCTCTTGTCCTACTTCATAACACTAC  800

seq1  CACAGTGTTGGATTATTTAGCATTCTGGGCTGCATCACCAAAAGAATTC  849
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTGTTGGATTATTTAGCATTCTGGGCTGCATCACCAAAAGAATTC  849