BAC Information

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BAC

Clone NameB6Ng01-102B22
Chromosome16 (Build37)
Map Location 72,230,991 - 72,400,829
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneRobo1, LOC100039310, LOC100039318, LOC100039326
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102B22.bB6Ng01-102B22.g
ACCDH911100DH911101
length1,1381,149
definitionDH911100|Mus musculus domesticus DNA, BAC clone: B6Ng01-102B22, 5' end.DH911101|Mus musculus domesticus DNA, BAC clone: B6Ng01-102B22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,399,688 - 72,400,829)(72,230,991 - 72,232,145)
sequence
gaattctctctcacacacactactattagttctgtggatacaattggcta
gttaatagattccataagtagatgatatgtaaaagtatttttgtaaagct
tgggttcatattgggatatggaggttatcaaatacaaaattctgtatgtc
aagctatgaattctggtctaaagagcagcaggttgttgtagaatcagaaa
aaggtcaatgctctagtttgaggccagcagagatgtacggcttgagctcc
ctggatgaagagcacatgctttcctcagccaaatatgccgtcactaaaat
agccaggctaatgtataactaaatacctggtctagctaaatatcttatct
agtctagctgacacatagctgacacacttaaccattacctgtgagctcct
ataatttgagcatttatcataatcccagttcaccacaaaaaagaagctcc
cttctctgagtcatcattccatacattggctgccattttaaaacattttc
atcctataatcttgtttagtaatttctgctcagcaaattttagccaagat
atatcctgtgcttatttgctgctttccatacacttttgacagttttgata
tttagagaatcaatgtttgcatattataaaaagttattatattatgcata
acgcatctatcattaccagatgttgaatacacattctttcttatttattc
agtgaaaaaatgcaactcagcaagaattataagaaaaggaagacttggat
ttcccttcttaaaaggcaagcacaatctttcagtgcaagatgagtgtctg
gtgatggcttaaaggagctcatagagacagcatcagtcacatagggtgag
tgtagttgagaacatattctgttgaaataatacacaacttaagcagctat
aaatacaaattctctgcaaatttcaaaagccagtgcttctgagatcataa
atcctatttgagccacattaatactatcttggaaacttctcagcaaagca
aatagttgaattatcagcacagtaaatcagaaacttcactggttgacacc
acacacacacacacacacacacccacaaccatcatcacatcaggtaatac
gaacctaattacattttaagccatttactcagctacta
gaattcattcatactagtaaacaattcctgaaaaataatctattttggaa
tacatgaacaccttaaagaaaaatatagtctggtagaaataaagaacaca
gactctgttctctgaataacaaattaaaagatagggatattttcagaaaa
tatatttacttttatttttccatgagttatagagaatttatactttctaa
attattactttccccatagagttaaatattatttcagtcaaggatctgta
gaaagatgtggttttaatgatagttttattgtgtgagattgacaaaattt
ctggcaaagtttcaaagataatagaattatgtgcctgagttcttatttct
cccttttgatttatgtaggttacactttgtttttcaataggagtcacaga
cattattttctttactcaattcttgctttaaaaaaaataccacacatgga
taaaacattaatcaacaggacagtgttctcaccatcaccattttcgaagg
atacaggataacgagttttcaaaatttttctcactttacactgcagatgt
ttaagagtaccaaatgaccatcttattcagtggcttctgtaagattccac
tagagggaaacatggaccaaaatgttgttcttgatcagcttcaaggggtg
agaggaaggctggttttcatgaataaatgccattgatttaatattgacca
tcttcacatttccacattgttatctgtgaagcagcttcctcttctgaaca
tcatctcgcacagagaggattccatgatggcttcattcatctggtttcta
ttactaaacccttgttgttcagccaccataattactagaagccaaagtag
caccaaattaaaaaccaacgaacaaataaatcaccattttatatgtaatg
actttatgggagaggtagtcagtgctttgttcattttgatataaatatat
ccaaacagctatagtttgatgcatagagtgttggtactgaataataaact
catatttggtgaaataaaagcttgctaactatggaatttttcaagcacat
ctccacatgttgttggaaaaggtggtaaatgccatactgctgaatgctca
ttgaaaaaaaatgtgctaaaactgccaaatatcaccaatgctagtcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_72399688_72400829
seq2: B6Ng01-102B22.b_48_1185 (reverse)

seq1  TAGTAGCTGAGTAAATGGCTTAAAATTGTATTTAGGTTTTGGTATTACCT  50
      ||||||||||||||||||||||||| |||| |||||  || |||||||||
seq2  TAGTAGCTGAGTAAATGGCTTAAAA-TGTAATTAGG--TTCGTATTACCT  47

seq1  GATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCA  100
      ||||||    ||  |||| ||||||||||||||||||||||| ||| |||
seq2  GATGTGATGATGGTTGTGGGTGTGTGTGTGTGTGTGTGTGTG-GTG-TCA  95

seq1  ACCAGTGAAGTTTCTGATTTACTGTGCTTGAT-ATTCAACTATTTGCTTT  149
      ||||||||||||||||||||||||||| |||| |||||||||||||||||
seq2  ACCAGTGAAGTTTCTGATTTACTGTGC-TGATAATTCAACTATTTGCTTT  144

seq1  GCTGAGAAG-TTCCAAGATAGTATTAATGTGGCTCAAATAGGATTTATGA  198
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGAAGTTTCCAAGATAGTATTAATGTGGCTCAAATAGGATTTATGA  194

seq1  TCTCAGAAGCACTGGCTTTTGAAATTTGCAGAGAATTTGTATTTATAGCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGAAGCACTGGCTTTTGAAATTTGCAGAGAATTTGTATTTATAGCT  244

seq1  GCTTAAGTTGTGTATTATTTCAACAGAATATGTTCTCAACTACACTCACC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAAGTTGTGTATTATTTCAACAGAATATGTTCTCAACTACACTCACC  294

seq1  CTATGTGACTGATGCTGTCTCTATGAGCTCCTTTAAGCCATCACCAGACA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTGACTGATGCTGTCTCTATGAGCTCCTTTAAGCCATCACCAGACA  344

seq1  CTCATCTTGCACTGAAAGATTGTGCTTGCCTTTTAAGAAGGGAAATCCAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTTGCACTGAAAGATTGTGCTTGCCTTTTAAGAAGGGAAATCCAA  394

seq1  GTCTTCCTTTTCTTATAATTCTTGCTGAGTTGCATTTTTTCACTGAATAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCCTTTTCTTATAATTCTTGCTGAGTTGCATTTTTTCACTGAATAA  444

seq1  ATAAGAAAGAATGTGTATTCAACATCTGGTAATGATAGATGCGTTATGCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAAAGAATGTGTATTCAACATCTGGTAATGATAGATGCGTTATGCA  494

seq1  TAATATAATAACTTTTTATAATATGCAAACATTGATTCTCTAAATATCAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATAATAACTTTTTATAATATGCAAACATTGATTCTCTAAATATCAA  544

seq1  AACTGTCAAAAGTGTATGGAAAGCAGCAAATAAGCACAGGATATATCTTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTCAAAAGTGTATGGAAAGCAGCAAATAAGCACAGGATATATCTTG  594

seq1  GCTAAAATTTGCTGAGCAGAAATTACTAAACAAGATTATAGGATGAAAAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAATTTGCTGAGCAGAAATTACTAAACAAGATTATAGGATGAAAAT  644

seq1  GTTTTAAAATGGCAGCCAATGTATGGAATGATGACTCAGAGAAGGGAGCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAAAATGGCAGCCAATGTATGGAATGATGACTCAGAGAAGGGAGCT  694

seq1  TCTTTTTTGTGGTGAACTGGGATTATGATAAATGCTCAAATTATAGGAGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTGTGGTGAACTGGGATTATGATAAATGCTCAAATTATAGGAGC  744

seq1  TCACAGGTAATGGTTAAGTGTGTCAGCTATGTGTCAGCTAGACTAGATAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGGTAATGGTTAAGTGTGTCAGCTATGTGTCAGCTAGACTAGATAA  794

seq1  GATATTTAGCTAGACCAGGTATTTAGTTATACATTAGCCTGGCTATTTTA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTAGCTAGACCAGGTATTTAGTTATACATTAGCCTGGCTATTTTA  844

seq1  GTGACGGCATATTTGGCTGAGGAAAGCATGTGCTCTTCATCCAGGGAGCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACGGCATATTTGGCTGAGGAAAGCATGTGCTCTTCATCCAGGGAGCT  894

seq1  CAAGCCGTACATCTCTGCTGGCCTCAAACTAGAGCATTGACCTTTTTCTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCGTACATCTCTGCTGGCCTCAAACTAGAGCATTGACCTTTTTCTG  944

seq1  ATTCTACAACAACCTGCTGCTCTTTAGACCAGAATTCATAGCTTGACATA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTACAACAACCTGCTGCTCTTTAGACCAGAATTCATAGCTTGACATA  994

seq1  CAGAATTTTGTATTTGATAACCTCCATATCCCAATATGAACCCAAGCTTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTTTGTATTTGATAACCTCCATATCCCAATATGAACCCAAGCTTT  1044

seq1  ACAAAAATACTTTTACATATCATCTACTTATGGAATCTATTAACTAGCCA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAATACTTTTACATATCATCTACTTATGGAATCTATTAACTAGCCA  1094

seq1  ATTGTATCCACAGAACTAATAGTAGTGTGTGTGAGAGAGAATTC  1142
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATCCACAGAACTAATAGTAGTGTGTGTGAGAGAGAATTC  1138

seq1: chr16_72230991_72232145
seq2: B6Ng01-102B22.g_65_1213

seq1  GAATTCATTCATACTAGTAAACAATTCCTGAAAAATAATCTATTTTGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCATACTAGTAAACAATTCCTGAAAAATAATCTATTTTGGAA  50

seq1  TACATGAACACCTTAAAGAAAAATATAGTCTGGTAGAAATAAAGAACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGAACACCTTAAAGAAAAATATAGTCTGGTAGAAATAAAGAACACA  100

seq1  GACTCTGTTCTCTGAATAACAAATTAAAAGATAGGGATATTTTCAGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTGTTCTCTGAATAACAAATTAAAAGATAGGGATATTTTCAGAAAA  150

seq1  TATATTTACTTTTATTTTTCCATGAGTTATAGAGAATTTATACTTTCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTACTTTTATTTTTCCATGAGTTATAGAGAATTTATACTTTCTAA  200

seq1  ATTATTACTTTCCCCATAGAGTTAAATATTATTTCAGTCAAGGATCTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTACTTTCCCCATAGAGTTAAATATTATTTCAGTCAAGGATCTGTA  250

seq1  GAAAGATGTGGTTTTAATGATAGTTTTATTGTGTGAGATTGACAAAATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATGTGGTTTTAATGATAGTTTTATTGTGTGAGATTGACAAAATTT  300

seq1  CTGGCAAAGTTTCAAAGATAATAGAATTATGTGCCTGAGTTCTTATTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAAAGTTTCAAAGATAATAGAATTATGTGCCTGAGTTCTTATTTCT  350

seq1  CCCTTTTGATTTATGTAGGTTACACTTTGTTTTTCAATAGGAGTCACAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTGATTTATGTAGGTTACACTTTGTTTTTCAATAGGAGTCACAGA  400

seq1  CATTATTTTCTTTACTCAATTCTTGCTTTAAAAAAAATACCACACATGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTTTCTTTACTCAATTCTTGCTTTAAAAAAAATACCACACATGGA  450

seq1  TAAAACATTAATCAACAGGACAGTGTTCTCACCATCACCATTTTCGAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACATTAATCAACAGGACAGTGTTCTCACCATCACCATTTTCGAAGG  500

seq1  ATACAGGATAACGAGTTTTCAAAATTTTTCTCACTTTACACTGCAGATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGGATAACGAGTTTTCAAAATTTTTCTCACTTTACACTGCAGATGT  550

seq1  TTAAGAGTACCAAATGACCATCTTATTCAGTGGCTTCTGTAAGATTCCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAGTACCAAATGACCATCTTATTCAGTGGCTTCTGTAAGATTCCAC  600

seq1  TAGAGGGAAACATGGACCAAAATGTTGTTCTTGATCAGCTTCAAGGGGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGGAAACATGGACCAAAATGTTGTTCTTGATCAGCTTCAAGGGGTG  650

seq1  AGAGGAAGGCTGGTTTTCATGAATAAATGCCATTGATTTAATATTGACCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAGGCTGGTTTTCATGAATAAATGCCATTGATTTAATATTGACCA  700

seq1  TCTTCACATTTCCACATTGTTATCTGTGAAGCAGCTTCCTCTTCTGAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCACATTTCCACATTGTTATCTGTGAAGCAGCTTCCTCTTCTGAACA  750

seq1  TCATCTCGCACAGAGAGGATTCCATGATGGCTTCATTCATCTGGTTTCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTCGCACAGAGAGGATTCCATGATGGCTTCATTCATCTGGTTTCTA  800

seq1  TTACTAAACCCTTGTTGTTCAGCCACCATAATTACTAGAAGCCAAAGTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAAACCCTTGTTGTTCAGCCACCATAATTACTAGAAGCCAAAGTAG  850

seq1  CACCAAATTAAAAACCAACGAACAAATAAATCACCATTTTATATGTAATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAATTAAAAACCAACGAACAAATAAATCACCATTTTATATGTAATG  900

seq1  ACTTTATGGGAGAGGTAGTCAGTGCTTTGTTCATTTTGATTATAAATATA  950
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ACTTTATGGGAGAGGTAGTCAGTGCTTTGTTCATTTTGA-TATAAATATA  949

seq1  TCCAAACAGCTATAGTTTGAATGCATAAGAGGTGTTGGTACTGAAT-ATA  999
      ||||||||||||||||||| |||||| ||| ||||||||||||||| |||
seq2  TCCAAACAGCTATAGTTTG-ATGCAT-AGA-GTGTTGGTACTGAATAATA  996

seq1  AACTCATATTTGGTGAAATAAAAGGCTTTGCTAACTATG--AATTTTCAA  1047
      ||||||||||||||||||||||||   ||||||||||||  | |||||||
seq2  AACTCATATTTGGTGAAATAAAAG--CTTGCTAACTATGGAATTTTTCAA  1044

seq1  GCACATCTCCACAATGTGTTGGAAAAGGTGGTTAAATGCCATACCTGCTG  1097
      |||||||||||||   ||||||||||||||| ||||||||||| ||||||
seq2  GCACATCTCCACATGTTGTTGGAAAAGGTGG-TAAATGCCATA-CTGCTG  1092

seq1  -ATGCTCATTGAAAAAAGAAATGTGCTAAAAACTGCC-AATATCACC-AT  1144
       |||||||||||||||  ||||||||| ||||||||| ||||||||| ||
seq2  AATGCTCATTGAAAAA--AAATGTGCT-AAAACTGCCAAATATCACCAAT  1139

seq1  GCTAAGTCTTC  1155
      ||| |||||||
seq2  GCT-AGTCTTC  1149