BAC Information

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BAC

Clone NameB6Ng01-102D05
Chromosome16 (Build37)
Map Location 79,025,305 - 79,157,539
singlet/doubletdoublet
Overlap genePrss7
Upstream geneLOC435483, LOC100039561, Cxadr, Btg3, D16Ertd472e, LOC100039605, 4930570E03Rik, Chodl
Downstream geneEG383172, 1700066C05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102D05.bB6Ng01-102D05.g
ACCDH911160DH911161
length1,1621,024
definitionDH911160|Mus musculus domesticus DNA, BAC clone: B6Ng01-102D05, 5' end.DH911161|Mus musculus domesticus DNA, BAC clone: B6Ng01-102D05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,025,305 - 79,026,473)(79,157,016 - 79,157,539)
sequence
gaattcacagcttgacagataatcagcacatgactgtctttatttagata
ttctgattggttgacttatgggatacacaattacttaaggacatttgatg
acagggataagcgttgaaggaacaataattttatatcccattgactacac
tgcatatctttacataagaaggggcctgattttttataagggcttcatat
ttctgtgtttctttgaatgatagctaatcagatcacagaggagcaggcag
aatgctaatccacatgccatcttttgaaatagcacaggatactgtgtaag
tgctttctggtctagaattcattactccagccagtgattcgagccatccc
aagtgtgtgaagtgtgattaggaagaatatattgaacactttctttgggg
gaatttacttcagtcttagttttctgctcacatattaaaacagaagcagg
aatcatgcagcaaaccatgataaaagcaaaggagatattggactaacaga
gtgtgattgacatgtgttcttttatgaaatgctcaaatgtgtttgcttgt
gatcagtgtcttctctcccgtgcctttcaacagagaaatatgggcagggt
tgtatataaaatgtgaactaattcatttgttatatgcagagtgagaataa
gatgagaaataaagtagagttgcttataaacacatatttagcctaatgaa
gcagaagttgctcagaataaatgagggttctatcaaggtgaaattgtggt
caaatgacttacagatgtaatctatgcacatacgttggattcatatttcc
aaatgtaagatgaaataaatgtgtataactggtggtgatagtaccagcgt
actcacatttttacgtatgttatgatattttataggtattttagctatgt
ttttgctcactcattcaaagctatgtagaagatcagcttcagttcagcaa
aagtccctgcatgtgatcgctagctgtctgtatccaaattcatctaaatt
catcttggttttacatgtttaggacatgctagaagaattcttattttact
acttagactactagtctactgcccagaaaatattttttagttagctgtag
tgtataatagaaggcacctaatgtttctctttctgttcagtcatgttcaa
atagaagtctac
gaattccattaatgagggttaagtattaaaaacctgaaacaagcttggga
ctggtggcacatgtcttcaatcccagcactctggaagcataggcaggtaa
tctctgtggatttggggccaactaggtctacagagtaagtttcaggacag
aaacggttacagagagaaatcctgcaggatagccaaaacaatcctgtaca
ataaaagaacttctggaggttcatgtagagagcattagttataaaatcca
cacagtattggcataaaacagaaaggttgatcaatggatggaattgaaga
aacataagtaaatccactcacctacaacacctgaatttttgataaagcag
ccagaaatatacaatggaaaaaaaaatcttcgacaaatggtgctggtctg
acagggtgtcagcatggagaataatgcaatcagatccatatctaccaccc
attctgaagacttccagtttgtccttttgactgatgtctgatattcaaaa
tatataaagaactcaagaaactagacaccaacaaaccaaataaaaaattt
taaaaataggatacaaacctaaacagagtattctcaacagagaaaactct
gatggccaaagagcaacatccttagttaccagggaataagtcatcggcaa
atgaaaacaactatgagattccatcttaacttattaaaatggtaaattca
aagacacaagtgatgactcatgctgataaggatgtgaaaagataggaaca
cacctccattgctggtgggagtgaaaacttgtatagccactttggaatca
atatggcaatttctcagaaaattgaaaatcctgggcatataaccaaagga
cactccaccacaccacaaggacacatgcgcaactatgttcacaggggctt
tcttcatgctattcagaaacttgaaacaacctagatgcctctcaactgaa
taatattttttaatgtagtacatttacacaatgaactattacccagttac
taaaaacaatgacatcatgaaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_79025305_79026473
seq2: B6Ng01-102D05.b_43_1204

seq1  GAATTCACAGCTTGACAGATAATCAGCACATGACTGTCTTTATTTAGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGCTTGACAGATAATCAGCACATGACTGTCTTTATTTAGATA  50

seq1  TTCTGATTGGTTGACTTATGGGATACACAATTACTTAAGGACATTTGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATTGGTTGACTTATGGGATACACAATTACTTAAGGACATTTGATG  100

seq1  ACAGGGATAAGCGTTGAAGGAACAATAATTTTATATCCCATTGACTACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGATAAGCGTTGAAGGAACAATAATTTTATATCCCATTGACTACAC  150

seq1  TGCATATCTTTACATAAGAAGGGGCCTGATTTTTTATAAGGGCTTCATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATATCTTTACATAAGAAGGGGCCTGATTTTTTATAAGGGCTTCATAT  200

seq1  TTCTGTGTTTCTTTGAATGATAGCTAATCAGATCACAGAGGAGCAGGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGTTTCTTTGAATGATAGCTAATCAGATCACAGAGGAGCAGGCAG  250

seq1  AATGCTAATCCACATGCCATCTTTTGAAATAGCACAGGATACTGTGTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTAATCCACATGCCATCTTTTGAAATAGCACAGGATACTGTGTAAG  300

seq1  TGCTTTCTGGTCTAGAATTCATTACTCCAGCCAGTGATTCGAGCCATCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCTGGTCTAGAATTCATTACTCCAGCCAGTGATTCGAGCCATCCC  350

seq1  AAGTGTGTGAAGTGTGATTAGGAAGAATATATTGAACACTTTCTTTGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGTGAAGTGTGATTAGGAAGAATATATTGAACACTTTCTTTGGGG  400

seq1  GAATTTACTTCAGTCTTAGTTTTCTGCTCACATATTAAAACAGAAGCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTACTTCAGTCTTAGTTTTCTGCTCACATATTAAAACAGAAGCAGG  450

seq1  AATCATGCAGCAAACCATGATAAAAGCAAAGGAGATATTGGACTAACAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATGCAGCAAACCATGATAAAAGCAAAGGAGATATTGGACTAACAGA  500

seq1  GTGTGATTGACATGTGTTCTTTTATGAAATGCTCAAATGTGTTTGCTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGATTGACATGTGTTCTTTTATGAAATGCTCAAATGTGTTTGCTTGT  550

seq1  GATCAGTGTCTTCTCTCCCGTGCCTTTCAACAGAGAAATATGGGCAGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGTGTCTTCTCTCCCGTGCCTTTCAACAGAGAAATATGGGCAGGGT  600

seq1  TGTATATAAAATGTGAACTAATTCATTTGTTATATGCAGAGTGAGAATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATAAAATGTGAACTAATTCATTTGTTATATGCAGAGTGAGAATAA  650

seq1  GATGAGAAATAAAGTAGAGTTGCTTATAAACACATATTTAGCCTAATGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGAAATAAAGTAGAGTTGCTTATAAACACATATTTAGCCTAATGAA  700

seq1  GCAGAAGTTGCTCAGAATAAATGAGGGTTCTATCAAGGTGAAATTGTGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAGTTGCTCAGAATAAATGAGGGTTCTATCAAGGTGAAATTGTGGT  750

seq1  CAAATGACTTACAGATGTAATCTATGCACATACGTTGGATTCATATTTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGACTTACAGATGTAATCTATGCACATACGTTGGATTCATATTTCC  800

seq1  AAATGTAAGATGAAATAAATGTGTATAACTGGTGGTGATAGTACCAGCGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAAGATGAAATAAATGTGTATAACTGGTGGTGATAGTACCAGCGT  850

seq1  ACTCACATTTTTACGTATGTTATGATATTTTATAGGTATTTTAGCTATGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACATTTTTACGTATGTTATGATATTTTATAGGTATTTTAGCTATGT  900

seq1  TTTTGCTCACTCATTCAAAGCTATGTAGAAGATCAGCTTCAGTTCAGCAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTCACTCATTCAAAGCTATGTAGAAGATCAGCTTCAGTTCAGCAA  950

seq1  AAGTCCCTGCATGTGATCGCTAGCTGTCTGTATCCAAATTCATCTAAAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AAGTCCCTGCATGTGATCGCTAGCTGTCTGTATCCAAATTCATCT-AAAT  999

seq1  TCATCTTGGTTTTACATGTTTAGGACATGCTAAGAAAGAAATTCTTATTT  1050
      ||||||||||||||||||||||||||||||| ||||   |||||||||||
seq2  TCATCTTGGTTTTACATGTTTAGGACATGCT-AGAA--GAATTCTTATTT  1046

seq1  TACTACTTAGACTACTAGGTCTAACTGCCCAG-AAATA-TTTCTAGTTAG  1098
      ||||||||||||||||| |||| ||||||||| ||||| ||| |||||||
seq2  TACTACTTAGACTACTA-GTCT-ACTGCCCAGAAAATATTTTTTAGTTAG  1094

seq1  CTGGTAGTTGTATAATAGAA-GCACCCTTAATGTTTCTCTTTCTGTTCAG  1147
      || |||| |||||||||||| |||||  ||||||||||||||||||||||
seq2  CT-GTAG-TGTATAATAGAAGGCACC--TAATGTTTCTCTTTCTGTTCAG  1140

seq1  TCATGTTCACATAGCAGTCTAC  1169
      ||||||||| |||| |||||||
seq2  TCATGTTCAAATAGAAGTCTAC  1162

seq1: chr16_79157016_79157539
seq2: B6Ng01-102D05.g_66_589 (reverse)

seq1  CTAGTTTCTTGAGTTCTTTATATATTTTGAATATCAGACATCAGTCAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTTCTTGAGTTCTTTATATATTTTGAATATCAGACATCAGTCAAAA  50

seq1  GGACAAACTGGAAGTCTTCAGAATGGGTGGTAGATATGGATCTGATTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAACTGGAAGTCTTCAGAATGGGTGGTAGATATGGATCTGATTGCA  100

seq1  TTATTCTCCATGCTGACACCCTGTCAGACCAGCACCATTTGTCGAAGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTCCATGCTGACACCCTGTCAGACCAGCACCATTTGTCGAAGATT  150

seq1  TTTTTTTCCATTGTATATTTCTGGCTGCTTTATCAAAAATTCAGGTGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCCATTGTATATTTCTGGCTGCTTTATCAAAAATTCAGGTGTTG  200

seq1  TAGGTGAGTGGATTTACTTATGTTTCTTCAATTCCATCCATTGATCAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGAGTGGATTTACTTATGTTTCTTCAATTCCATCCATTGATCAACC  250

seq1  TTTCTGTTTTATGCCAATACTGTGTGGATTTTATAACTAATGCTCTCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTTTTATGCCAATACTGTGTGGATTTTATAACTAATGCTCTCTAC  300

seq1  ATGAACCTCCAGAAGTTCTTTTATTGTACAGGATTGTTTTGGCTATCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACCTCCAGAAGTTCTTTTATTGTACAGGATTGTTTTGGCTATCCTG  350

seq1  CAGGATTTCTCTCTGTAACCGTTTCTGTCCTGAAACTTACTCTGTAGACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATTTCTCTCTGTAACCGTTTCTGTCCTGAAACTTACTCTGTAGACC  400

seq1  TAGTTGGCCCCAAATCCACAGAGATTACCTGCCTATGCTTCCAGAGTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGGCCCCAAATCCACAGAGATTACCTGCCTATGCTTCCAGAGTGCT  450

seq1  GGGATTGAAGACATGTGCCACCAGTCCCAAGCTTGTTTCAGGTTTTTAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTGAAGACATGTGCCACCAGTCCCAAGCTTGTTTCAGGTTTTTAAT  500

seq1  ACTTAACCCTCATTAATGGAATTC  524
      ||||||||||||||||||||||||
seq2  ACTTAACCCTCATTAATGGAATTC  524