BAC Information

Click to search

BAC

Clone NameB6Ng01-103B10
Chromosome16 (Build37)
Map Location 64,628,592 - 64,629,770
singlet/doubletsinglet
Overlap genenone
Upstream geneEpha3, LOC100043540, Ckt2
Downstream gene4930453N24Rik, Zfp654, LOC433036, Cggbp1, LOC668242, LOC100043815, LOC677448, Htr1f, LOC668247, LOC672931, Pou1f1, Chmp2b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103B10.bB6Ng01-103B10.g
ACCDH911789DH911790
length1,1611,154
definitionDH911789|Mus musculus domesticus DNA, BAC clone: B6Ng01-103B10, 5' end.DH911790|Mus musculus domesticus DNA, BAC clone: B6Ng01-103B10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacgaacacatcaaaacgatcattcaccatgatcaagtaggcttc
atcccagggatgcagggatggttcagtatatggaaatccatcacataatc
cattatataaacaaattctaaaaaaaaaatcacatgatcatgtcattaga
tgccgaaaaagtctttgaaaaaatacaataccacttaatgttaaagtact
ggagagatcatgaattcagggcctataccaagacataataaaagcaatat
acagcaaaccaagagccaatatcaaattaaatggagaggtacttgaagca
atcccactaaaaaccaatttcatttttaatgtatcaaaacaatacattct
gagaatagatcttacaaaataagtcaagtctgtatagagaaattatggtg
tggatgacagttaaatattcatatgaaattctaatgtctataccatattt
tttcatggaagtatttgtactacagaaacttcaatttctacatcaatttg
tatatttaataaaagtttaattttaaaatttatttatttatttaggatgt
atgtatgtgaatgtgtgtatgcaagaatatcattggcacacatgtggaag
taagaaaatttatggagttctttttgtatttcattttatggattctgggg
acctaactcagccatggaacatgtttcttattttttcaataagtatctca
tgtaatttgaaaatgacaaacaaaagttggggacttacattgtcaagatt
atatcatatacatcatgccttatatattatgtgttatatgttgtatagtt
ctggtatttcataaatttgactattaataagcaacctttgaaaatgcaga
caaatgagactttcaagtgtccagaacaactctttcctgacaatggttag
ttactttattatgacaagggtcattacaatgaagaaatcatttcttgttt
aatgaattatgtaggtgggttctttatataaatacttgggccaactcaat
tcttgtatataaaactcttgatttataattaaatatggtttgtagataaa
actgtgatgccccatgagtatcttctttctctctctgtaaaaacagttaa
ttcttcagagactgcttggggtctttgtactaacttttgaaggcttcatg
tcatagccact
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatctttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggaggccatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatatagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaaagtagccaggagctaaagggatctgcaccctat
agtgacacattatgactacagtactcgagctcttgactctagctgcatat
atatcaaagatgctagtcgcatcactgagagagtcatgacttgcaactaa
tggtcccagtcggacatcaggtccaaatgggaatgggtggccagggggat
gtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_64628592_64629770
seq2: B6Ng01-103B10.b_43_1203 (reverse)

seq1  AGTGGCTTATGACAATGAAAGGCCTTCAAAAGTTTAAGTACAAAGACCCC  50
      |||||| |||||| |||||  |||||||||||||  ||||||||||||||
seq2  AGTGGC-TATGAC-ATGAA--GCCTTCAAAAGTT--AGTACAAAGACCCC  44

seq1  AGGCAAGTTCTCCTGAAGAATTAACTGTGTATACAGAAGAGAAGGAAAGA  100
      | |||   ||| |||||||||||||||| | ||||| |||||  ||||||
seq2  AAGCA--GTCT-CTGAAGAATTAACTGTTTTTACAG-AGAGA--GAAAGA  88

seq1  AGGATACTCCATGGGGCATCACAGTTTTTATTCTACAAACCATATTTAAT  150
      | |||||| |||||||||||||||||||   |||||||||||||||||||
seq2  A-GATACT-CATGGGGCATCACAGTTTT--ATCTACAAACCATATTTAAT  134

seq1  TATAAAATCAAGAGTTTTAATATACAAGAATTGAGTTGGCCCAAGTATTT  200
      ||| |||||||||||||| |||||||||||||||||||||||||||||||
seq2  TAT-AAATCAAGAGTTTT-ATATACAAGAATTGAGTTGGCCCAAGTATTT  182

seq1  ATATAAAGAACCAACCTACATAATTCATTAAACAAGAAATGATTTCTTCA  250
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATATAAAGAACCCACCTACATAATTCATTAAACAAGAAATGATTTCTTCA  232

seq1  TTGTAATGACCCTTGTCATAATAAAGTAACTAACCATTGTCAGGAAAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATGACCCTTGTCATAATAAAGTAACTAACCATTGTCAGGAAAGAG  282

seq1  TTGTTCTGGACACTTGAAAGTCTCATTTGTCTGCATTTTCAAAGGTTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTGGACACTTGAAAGTCTCATTTGTCTGCATTTTCAAAGGTTGCT  332

seq1  TATTAATAGTCAAATTTATGAAATACCAGAACTATACAACATATAACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATAGTCAAATTTATGAAATACCAGAACTATACAACATATAACACA  382

seq1  TAATATATAAGGCATGATGTATATGATATAATCTTGACAATGTAAGTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATATAAGGCATGATGTATATGATATAATCTTGACAATGTAAGTCCC  432

seq1  CAACTTTTGTTTGTCATTTTCAAATTACATGAGATACTTATTGAAAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTTTGTTTGTCATTTTCAAATTACATGAGATACTTATTGAAAAAAT  482

seq1  AAGAAACATGTTCCATGGCTGAGTTAGGTCCCCAGAATCCATAAAATGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACATGTTCCATGGCTGAGTTAGGTCCCCAGAATCCATAAAATGAA  532

seq1  ATACAAAAAGAACTCCATAAATTTTCTTACTTCCACATGTGTGCCAATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAAAAGAACTCCATAAATTTTCTTACTTCCACATGTGTGCCAATGA  582

seq1  TATTCTTGCATACACACATTCACATACATACATCCTAAATAAATAAATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTGCATACACACATTCACATACATACATCCTAAATAAATAAATAA  632

seq1  ATTTTAAAATTAAACTTTTATTAAATATACAAATTGATGTAGAAATTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAATTAAACTTTTATTAAATATACAAATTGATGTAGAAATTGAA  682

seq1  GTTTCTGTAGTACAAATACTTCCATGAAAAAATATGGTATAGACATTAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGTAGTACAAATACTTCCATGAAAAAATATGGTATAGACATTAGA  732

seq1  ATTTCATATGAATATTTAACTGTCATCCACACCATAATTTCTCTATACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATATGAATATTTAACTGTCATCCACACCATAATTTCTCTATACAG  782

seq1  ACTTGACTTATTTTGTAAGATCTATTCTCAGAATGTATTGTTTTGATACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGACTTATTTTGTAAGATCTATTCTCAGAATGTATTGTTTTGATACA  832

seq1  TTAAAAATGAAATTGGTTTTTAGTGGGATTGCTTCAAGTACCTCTCCATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATGAAATTGGTTTTTAGTGGGATTGCTTCAAGTACCTCTCCATT  882

seq1  TAATTTGATATTGGCTCTTGGTTTGCTGTATATTGCTTTTATTATGTCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGATATTGGCTCTTGGTTTGCTGTATATTGCTTTTATTATGTCTT  932

seq1  GGTATAGGCCCTGAATTCATGATCTCTCCAGTACTTTAACATTAAGTGGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATAGGCCCTGAATTCATGATCTCTCCAGTACTTTAACATTAAGTGGT  982

seq1  ATTGTATTTTTTCAAAGACTTTTTCGGCATCTAATGACATGATCATGTGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATTTTTTCAAAGACTTTTTCGGCATCTAATGACATGATCATGTGA  1032

seq1  TTTTTTTTTTAGAATTTGTTTATATAATGGATTATGTGATGGATTTCCAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTAGAATTTGTTTATATAATGGATTATGTGATGGATTTCCAT  1082

seq1  ATACTGAACCATCCCTGCATCCCTGGGATGAAGCCTACTTGATCATGGTG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGAACCATCCCTGCATCCCTGGGATGAAGCCTACTTGATCATGGTG  1132

seq1  AATGATCGTTTTGATGTGTTCGTGAATTC  1179
      |||||||||||||||||||||||||||||
seq2  AATGATCGTTTTGATGTGTTCGTGAATTC  1161