BAC Information

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BAC

Clone NameB6Ng01-104F12
Chromosome16 (Build37)
Map Location 40,046,753 - 40,220,792
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC667400
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104F12.bB6Ng01-104F12.g
ACCDH912672DH912673
length5841,122
definitionDH912672|Mus musculus domesticus DNA, BAC clone: B6Ng01-104F12, 5' end.DH912673|Mus musculus domesticus DNA, BAC clone: B6Ng01-104F12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(40,046,753 - 40,047,336)(40,219,643 - 40,220,792)
sequence
gaattctgtcatatgagattggatctgtaagttacagtaaaggggtttca
tactgcaagtgtataacaccttaaaacgtaaaagtagatggaggccctgt
gttccatccaatagctgactgtgagcatccacttctatgttttccaggct
ctggcatagcctcacaagagacagctatatcagggtcctttcagcaaatt
cttgctggcgtatgcaatggtgtctgcatttgaaggctgattatgggatg
gatccccgggtatagcattctctagatggtccatcctttcatctcagctc
caaactttgtctctgtaacttcttccatgggtattttgttccagattcta
agaagaggcaaattgtccacactttggtcttcgttcttcttgagtttaat
gtgttttgcaaattgtatcttgtatcttgggtattctaagattctgggct
aatatctacttatcagtgagtacatatcatgtgagttcttttgtgcttgg
gttacctcactcaggatgataccctccaggtccatccatttgcctaggaa
tttcataaagtacccaacgagctaaaggggtctg
gaattctatgtgataaatgtgatatttggcatgaaattcatcaacatctt
caggactaaaaacaaattactgtattgtgtgtcatgtagttactgaagaa
aactgaaaaatcattgaaaatatttttgcactcatggtaaataggaaagt
gaaactttaaacccaggtaagtagcaactcaaagtcaccatctaatttta
gaaatacttttacatttatacaaacaatcctctttccccaaagtatccat
gtgtgtgtaatatatacatatgtgtctatacatatatatgcatatgtata
tatatatatgtatatatacacatatacatatatgtatatatgtatgtgtg
tatctatatatctatatctatatattacacacacatgcacacacattcac
atacaggattgctcaatcacagattgctttttttttaatcactctccaag
tgaatcacatcctatcttctttgtacaagtaggatataaattacagagcc
taggacctagtcttcttctaaaaaaaatactcataggtcactactcagaa
tagcccttcagaaaaatcctactaattaatatttaaaacactgtcttata
atagtttctaactgtttagatagattttaaaataaaacacaaaaacgtgg
cttgtagcttaagttttgaaggaaatgatcaacacaaatcttctgggttt
tttttttttccttactctgcattgtgaattagtaattctgttctactcat
agttaactatccaaatcttcatttttcagttctctttaacccaggaccat
gttaaaaggagaaaatcaaacttggtcttattaaaagagtgacttgtcag
aaattgaataaaatatgtaacagtgggggatggaggaacttggggtagca
actggagggttccagacacagggaagcagagatttctagacccaacaggg
atgactttagcataggagaggtaagactggtagagaccatctccagtaga
gagaaaggtcccagtcaagggatggggccagcagcatctcaatgttttac
caaatgttctttcaaagaagaatggacaataatggacaactgaggaggca
tctgggatcacactcttgggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_40046753_40047336
seq2: B6Ng01-104F12.b_43_626

seq1  GAATTCTGTCATATGAGATTGGATCTGTAAGTTACAGTAAAGGGGTTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCATATGAGATTGGATCTGTAAGTTACAGTAAAGGGGTTTCA  50

seq1  TACTGCAAGTGTATAACACCTTAAAACGTAAAAGTAGATGGAGGCCCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCAAGTGTATAACACCTTAAAACGTAAAAGTAGATGGAGGCCCTGT  100

seq1  GTTCCATCCAATAGCTGACTGTGAGCATCCACTTCTATGTTTTCCAGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCATCCAATAGCTGACTGTGAGCATCCACTTCTATGTTTTCCAGGCT  150

seq1  CTGGCATAGCCTCACAAGAGACAGCTATATCAGGGTCCTTTCAGCAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCATAGCCTCACAAGAGACAGCTATATCAGGGTCCTTTCAGCAAATT  200

seq1  CTTGCTGGCGTATGCAATGGTGTCTGCATTTGAAGGCTGATTATGGGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTGGCGTATGCAATGGTGTCTGCATTTGAAGGCTGATTATGGGATG  250

seq1  GATCCCCGGGTATAGCATTCTCTAGATGGTCCATCCTTTCATCTCAGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCCGGGTATAGCATTCTCTAGATGGTCCATCCTTTCATCTCAGCTC  300

seq1  CAAACTTTGTCTCTGTAACTTCTTCCATGGGTATTTTGTTCCAGATTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTTGTCTCTGTAACTTCTTCCATGGGTATTTTGTTCCAGATTCTA  350

seq1  AGAAGAGGCAAATTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGGCAAATTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTAAT  400

seq1  GTGTTTTGCAAATTGTATCTTGTATCTTGGGTATTCTAAGATTCTGGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTGCAAATTGTATCTTGTATCTTGGGTATTCTAAGATTCTGGGCT  450

seq1  AATATCTACTTATCAGTGAGTACATATCATGTGAGTTCTTTTGTGCTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTACTTATCAGTGAGTACATATCATGTGAGTTCTTTTGTGCTTGG  500

seq1  GTTACCTCACTCAGGATGATACCCTCCAGGTCCATCCATTTGCCTAGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCTCACTCAGGATGATACCCTCCAGGTCCATCCATTTGCCTAGGAA  550

seq1  TTTCATAAAGTACCCAACGAGCTAAAGGGGTCTG  584
      ||||||||||||||||||||||||||||||||||
seq2  TTTCATAAAGTACCCAACGAGCTAAAGGGGTCTG  584

seq1: chr16_40219643_40220792
seq2: B6Ng01-104F12.g_67_1188 (reverse)

seq1  TCCCCAAGTGGTGTGGTTCCCAGATGGCCCTTCCTTCAGTTTCTGCTCCA  50
      ||||||||  |||| | |||||||||  |||  | ||||||     ||||
seq2  TCCCCAAG-AGTGT-GATCCCAGATG--CCT--CCTCAGTT----GTCCA  40

seq1  TTTTTTTGTCCCTGTCTTTCTTTTGGACAAGAACATTTCTGGGTTAAAAA  100
        || |||||| | || ||||||  || ||||||||||   |||  ||||
seq2  --TTATTGTCCAT-TC-TTCTTT--GA-AAGAACATTT---GGT--AAAA  78

seq1  CATTGAGATGGCTGGCTGGCCCCATCCCTTGACTGGGGACCTTTTCTCTC  150
      ||||||||| ||| |||||||||||||||||||| |||||| ||||||||
seq2  CATTGAGAT-GCT-GCTGGCCCCATCCCTTGACT-GGGACC-TTTCTCTC  124

seq1  TACTGGAGATGGTCTCTACAAGTTCTATCTCTCCTATGCTAAAGTCATCC  200
      ||||||||||||||||||| |||  || ||||||||||||||||||||||
seq2  TACTGGAGATGGTCTCTACCAGTCTTACCTCTCCTATGCTAAAGTCATCC  174

seq1  CTGTTGGGTTCTAGGAATCTCTTGCTTCCCTGTTGTCTGGGACCCTCCAG  250
      |||||||| ||||| |||||| |||||||||| ||||||| |||||||||
seq2  CTGTTGGG-TCTAGAAATCTC-TGCTTCCCTG-TGTCTGGAACCCTCCAG  221

seq1  TGGCTACCCC-AGTTCCT-CATCCCCCACTGTTACATATTTTTATTCAAT  298
      | |||||||| ||||||| ||||||||||||||||||| |||||||||| 
seq2  TTGCTACCCCAAGTTCCTCCATCCCCCACTGTTACATA-TTTTATTCAA-  269

seq1  TTTCTGACAAGTCACTCTTTTAATAAGACCAAGTTTGATTTTCTCCTTTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGACAAGTCACTCTTTTAATAAGACCAAGTTTGATTTTCTCCTTTT  319

seq1  AACATGGTCCTGGGTTAAAGAGAACTG-AAAATGAAGATTTGGATAGTTA  397
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AACATGGTCCTGGGTTAAAGAGAACTGAAAAATGAAGATTTGGATAGTTA  369

seq1  ACTATGAGTAGAACAGAATTACTAATTCACAATGCAGAGTAAGGAAAAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGAGTAGAACAGAATTACTAATTCACAATGCAGAGTAAGGAAAAAA  419

seq1  AAAAAACCCAGAAGATTTGTGTTGATCATTTCCTTCAAAACTTAAGCTAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACCCAGAAGATTTGTGTTGATCATTTCCTTCAAAACTTAAGCTAC  469

seq1  AAGCCACGTTTTTGTGTTTTATTTTAAAATCTATCTAAACAGTTAGAAAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCACGTTTTTGTGTTTTATTTTAAAATCTATCTAAACAGTTAGAAAC  519

seq1  TATTATAAGACAGTGTTTTAAATATTAATTAGTAGGATTTTTCTGAAGGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATAAGACAGTGTTTTAAATATTAATTAGTAGGATTTTTCTGAAGGG  569

seq1  CTATTCTGAGTAGTGACCTATGAGTATTTTTTTTAGAAGAAGACTAGGTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCTGAGTAGTGACCTATGAGTATTTTTTTTAGAAGAAGACTAGGTC  619

seq1  CTAGGCTCTGTAATTTATATCCTACTTGTACAAAGAAGATAGGATGTGAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCTCTGTAATTTATATCCTACTTGTACAAAGAAGATAGGATGTGAT  669

seq1  TCACTTGGAGAGTGATTAAAAAAAAAGCAATCTGTGATTGAGCAATCCTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTGGAGAGTGATTAAAAAAAAAGCAATCTGTGATTGAGCAATCCTG  719

seq1  TATGTGAATGTGTGTGCATGTGTGTGTAATATATAGATATAGATATATAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGAATGTGTGTGCATGTGTGTGTAATATATAGATATAGATATATAG  769

seq1  ATACACACATACATATATACATATATGTATATGTGTATATATACATATAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACACATACATATATACATATATGTATATGTGTATATATACATATAT  819

seq1  ATATATACATATGCATATATATGTATAGACACATATGTATATATTACACA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATACATATGCATATATATGTATAGACACATATGTATATATTACACA  869

seq1  CACATGGATACTTTGGGGAAAGAGGATTGTTTGTATAAATGTAAAAGTAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGATACTTTGGGGAAAGAGGATTGTTTGTATAAATGTAAAAGTAT  919

seq1  TTCTAAAATTAGATGGTGACTTTGAGTTGCTACTTACCTGGGTTTAAAGT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAAATTAGATGGTGACTTTGAGTTGCTACTTACCTGGGTTTAAAGT  969

seq1  TTCACTTTCCTATTTACCATGAGTGCAAAAATATTTTCAATGATTTTTCA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTTCCTATTTACCATGAGTGCAAAAATATTTTCAATGATTTTTCA  1019

seq1  GTTTTCTTCAGTAACTACATGACACACAATACAGTAATTTGTTTTTAGTC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTTCAGTAACTACATGACACACAATACAGTAATTTGTTTTTAGTC  1069

seq1  CTGAAGATGTTGATGAATTTCATGCCAAATATCACATTTATCACATAGAA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGATGTTGATGAATTTCATGCCAAATATCACATTTATCACATAGAA  1119

seq1  TTC  1150
      |||
seq2  TTC  1122