BAC Information

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BAC

Clone NameB6Ng01-105D07
Chromosome16 (Build37)
Map Location 16,740,857 - 16,741,810
singlet/doubletsinglet
Overlap genenone
Upstream genePrkdc, 2410018G20Rik, Cebpd, 2310008H04Rik, LOC100043266, LOC224010, D16Ertd727e, Pkp2, EG433003, Yars2, Dnm1l, LOC665743, Fgd4, Olfr19, 4933404G15Rik
Downstream geneSpag6, EG665562, EG436405, Vpreb1, Top3b, Ppm1f, LOC100042783, EG623519, Mapk1, Ypel1, Ppil2, 2610318N02Rik, Sdf2l1, LOC623568, Ccdc116, 1810015A11Rik, Ube2l3, Gm603, Hic2, D16Bwg1494e, Pik4ca, Serpind1, Snap29, Crkl, Aifm3, Lztr1, Thap7, 4930451C15Rik, P2rxl1, Slc7a4, Smpd4, Pcqap, EG433050, Map1lc3-ps8, EG665892
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105D07.bB6Ng01-105D07.g
ACCDH913290DH913291
length950410
definitionDH913290|Mus musculus domesticus DNA, BAC clone: B6Ng01-105D07, 5' end.DH913291|Mus musculus domesticus DNA, BAC clone: B6Ng01-105D07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccatgtaagcacaaatcaaattctaacacacccagaaacaaaca
acataaaaaaacaaaacaaaaacagtatctaactgaaaccatgccaatat
ttgctcacagctgtgaagacttatttaggccatgctagtattaaggaaaa
aacaaaaaacaaaaaacaaaaaaccagcagagggctgattcctttcttaa
gattcctggatcaaaaatctctcaatgggggaactttgcagataactatc
cacctgtaaacaaaatgagatgtgttgaattatctgtcagatcttatttg
tctccagttcagatcatcttacagacatagatacagtgttcttccccact
tcattaggaaccataaaagaagagttctgtgcggaatgtttgctctacag
aactatttaatatcctctgaccttaatcctaatcctataagatccaactt
tccagaagaagggaggaggaaattagaaggaagaggaggatgaggatgag
aagaagaaagacaaaagaagaagaaaaaagaagtagaagatgcaagaaca
attttaaagtaagcattctctttgtccaccttctcaaatttatattctgt
aagcaagcgggcaccatacccactcagagtggataatttaccacgtatac
ccatttagagaatgcagaatgttcttttaccttggcctatttaggtttag
caactgaaaaagtaaaaacaaaagctttcagtgctaaagatggcgggtgg
ttagaaataaaagcagagagccaggaggaaaaaatagggaaaatcagtct
tggtcattacgacccagcagaacccttcttctggactcccagtttagctg
ttacttctttgtgggggttgccaggaagcctgatgctgaggcaacttcct
atttcctcactgccgggggttgcagtgctggaacccctgacctagtgtgt

cccacccctaagccccttaccccattaagaccccctagttttcgagcctt
ggggtcgaatccactgtctcctgtgttagatacgttttgacccagagctc
tgtcattaaactgcctcatgtgtttacaacaagaaaggattctcatgttt
ctttgggttctctctctctcccgaggctagagtgggggtccccgaaaggg
ggtcttacacctctatgtgagtgttcctctacccacccacccacccactt
gcaactccccacccttgattcccctacactggggtatttactgagccctc
ataggaacaaggacctctcccactgatgcatgacaaggccatcgtctgct
acatatgcagctggagccatgtgtacccttttgttgatggcttagtccct
gggagttctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_16740857_16741810
seq2: B6Ng01-105D07.b_41_990 (reverse)

seq1  ACACACTAGGTCAGGGGTTCCAGCACTGCAACACCCAGGCAGTGGAGGAA  50
      |||||||||||||||||||||||||||||||| ||| |||||| ||||||
seq2  ACACACTAGGTCAGGGGTTCCAGCACTGCAAC-CCCCGGCAGT-GAGGAA  48

seq1  ATAGGAAGTTGCCTCAGCATCATGGCTTTCCTGGCAA-CCCCACAAAGAA  99
      |||||||||||||||||||||| ||| |||||||||| |||||||||| |
seq2  ATAGGAAGTTGCCTCAGCATCA-GGC-TTCCTGGCAACCCCCACAAAG-A  95

seq1  AGTAACAGCTTAACTGGGAGTCCAGAGAGAAGGGTTCTGCTGGGTCGTAA  149
      |||||||||| ||||||||||||||| |||||||||||||||||||||||
seq2  AGTAACAGCTAAACTGGGAGTCCAGA-AGAAGGGTTCTGCTGGGTCGTAA  144

seq1  TGACCAAGACTGATTTTCCCTATTTTTTCCTCCTGGCTCTCTGCTTTTAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAAGACTGATTTTCCCTATTTTTTCCTCCTGGCTCTCTGCTTTTAT  194

seq1  TTCTAACCACCCGCCATCTTTAGCACTG-AAGCTTTTGTTTTTAC-TTTT  247
      |||||||||||||||||||||||||||| |||||||||||||||| ||||
seq2  TTCTAACCACCCGCCATCTTTAGCACTGAAAGCTTTTGTTTTTACTTTTT  244

seq1  CAGTTGCTAAACCTAAATAGGCCAAGGTAAAAGAACATTCTGCATTCTCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGCTAAACCTAAATAGGCCAAGGTAAAAGAACATTCTGCATTCTCT  294

seq1  AAATGGGTATACGTGGTAAATTATCCACTCTGAGTGGGTATGGTGCCCGC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGTATACGTGGTAAATTATCCACTCTGAGTGGGTATGGTGCCCGC  344

seq1  TTGCTTACAGAATATAAATTTGAGAAGGTGGACAAAGAGAATGCTTACTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTACAGAATATAAATTTGAGAAGGTGGACAAAGAGAATGCTTACTT  394

seq1  TAAAATTGTTCTTGCATCTTCTACTTCTTTTTTCTTCTTCTTTTGTCTTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTGTTCTTGCATCTTCTACTTCTTTTTTCTTCTTCTTTTGTCTTT  444

seq1  CTTCTTCTCATCCTCATCCTCCTCTTCCTTCTAATTTCCTCCTCCCTTCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCTCATCCTCATCCTCCTCTTCCTTCTAATTTCCTCCTCCCTTCT  494

seq1  TCTGGAAAGTTGGATCTTATAGGATTAGGATTAAGGTCAGAGGATATTAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAAAGTTGGATCTTATAGGATTAGGATTAAGGTCAGAGGATATTAA  544

seq1  ATAGTTCTGTAGAGCAAACATTCCGCACAGAACTCTTCTTTTATGGTTCC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTCTGTAGAGCAAACATTCCGCACAGAACTCTTCTTTTATGGTTCC  594

seq1  TAATGAAGTGGGGAAGAACACTGTATCTATGTCTGTAAGATGATCTGAAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAAGTGGGGAAGAACACTGTATCTATGTCTGTAAGATGATCTGAAC  644

seq1  TGGAGACAAATAAGATCTGACAGATAATTCAACACATCTCATTTTGTTTA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGACAAATAAGATCTGACAGATAATTCAACACATCTCATTTTGTTTA  694

seq1  CAGGTGGATAGTTATCTGCAAAGTTCCCCCATTGAGAGATTTTTGATCCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGGATAGTTATCTGCAAAGTTCCCCCATTGAGAGATTTTTGATCCA  744

seq1  GGAATCTTAAGAAAGGAATCAGCCCTCTGCTGGTTTTTTGTTTTTTGTTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCTTAAGAAAGGAATCAGCCCTCTGCTGGTTTTTTGTTTTTTGTTT  794

seq1  TTTGTTTTTTCCTTAATACTAGCATGGCCTAAATAAGTCTTCACAGCTGT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTTTCCTTAATACTAGCATGGCCTAAATAAGTCTTCACAGCTGT  844

seq1  GAGCAAATATTGGCATGGTTTCAGTTAGATACTGTTTTTGTTTTGTTTTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAATATTGGCATGGTTTCAGTTAGATACTGTTTTTGTTTTGTTTTT  894

seq1  TTATGTTGTTTGTTTCTGGGTGTGTTGGGAATTTGATTTGTGCTTACATG  947
      ||||||||||||||||||||||||||  ||||||||||||||||||||||
seq2  TTATGTTGTTTGTTTCTGGGTGTGTT-AGAATTTGATTTGTGCTTACATG  943

seq1  GGAATTC  954
      |||||||
seq2  GGAATTC  950