BAC Information

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BAC

Clone NameB6Ng01-106E14
Chromosome16 (Build37)
Map Location 30,857,062 - 30,992,684
singlet/doubletdoublet
Overlap geneAI480653
Upstream geneGm1968, LOC100043102, 9030404E10Rik, Hes1, EG547263, 1700025H01Rik, LOC100043110, Cpn2, Lrrc15, Gp5, Atp13a3, Tmem44, Lsg1, BC022623, LOC100043122
Downstream geneCentb2, Ppp1r2, Apod, 1700007E05Rik, Bdh1, Gm536, Dlg1, Mfi2, LOC677155, Pigz, 0610012G03Rik, Ncbp2, Senp5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106E14.bB6Ng01-106E14.g
ACCDH914068DH914069
length7181,115
definitionDH914068|Mus musculus domesticus DNA, BAC clone: B6Ng01-106E14, 5' end.DH914069|Mus musculus domesticus DNA, BAC clone: B6Ng01-106E14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(30,857,062 - 30,857,779)(30,991,556 - 30,992,684)
sequence
gaattcaatatgttgtcttgaatgttatcagatagcaatcaactcatgga
cccaggtggaaaacctccagtattgactgcatatattacagcacaaatcc
attttcaacagaaatgaggaaggagaagaaggcataagacaggaaatgag
aacctagcttagaatatagggctctttttttattttaaggaaggggcaag
ttaagagaagactactcccgcctcgtaaatggctttttaagaatgcgtat
gggtgttttacctacatgcgtgtctgcgcaacacttgagtgcaatgatca
cagaagccagagagggcatcagataccctaggattggaaatagagagctg
tcagccaccatgtgggtgctgggaatcaaattctcattctttgggagagc
aaccggtcctcttaattgctgagcctcatctccagcccctcaaatagcat
cttgtaagagaacaaatctcctttgcagaacaagttatcagtaagtatta
agaatactggggctggagatggctcagaggttaaggtcagttgctgctcc
tgcagagggcctgggtttgtttctcagcacccacatggcagctcacaact
gcctgtacctccaattccaggggatccagtgccctcttcctgcaggcact
tagtgcacaatacatacatgcaggcaatctctctctctctctctctctct
ctctctctctctctctct
gaattcattaacgagaaatcagctttgacaggaagatgatcatgcatgtg
accaaatactgagagaagcaacttaggggaggaaagacttattttggctc
atgggttcagcatgacacatcagggaggggtctagggccaagttggtctg
tggctgagaagcagagaaagaagattctggcactggtggggccccagcct
atgggatggctgtgcccacatctgggacaggccttctctacacatccaga
ggtgtgcatacccaatgtcctagatgcagtccaagcagtttgacagttga
acttgacatcatgtcctggcaccaatcagacaatctggacagtcttcatt
tgtgttcttcattgctaagatgagcgtcatggtttattgtatgtttcagg
actgtttggctctgaaataaacccacctggtgctcactacctgcccagaa
gtctgtctccattgccgtgtctattggtgattgaactttagtgatgagca
gattgcttttcacaagccttcaagtactatatacccttgtgctgcacccc
cgtgcgcctctaacaccattgttgttggtagtggtggtgtctaaggattt
tagggcctctccagggtggtatcagttccaagcctctaagaaaaggaaga
atgagaacatggcattgccctggctttcagctcttacttattttgagaag
gctctaagcatcgtcccagtgaaggctgatgccgttagtgcccccaaagc
cctctgtttccctggtcctgagcagaacctacttttgtagcaatgacaac
ttgtacttaatggctgcatcacacaggacagtcactgtcccaagcactca
gatgggtagcccaactccatggaggtcacatggttccagtccccatatta
cagcggagggggatgctgaggtacagaaagacagaaataagacagacatc
tatgtgtcttcacccataatgtgtgtcagaaataagacatcatgtgttca
acttgtaaatatgtgtcaggatgaactgtggcttctgaaccaggcctgtc
tccatccttgctctacctgtccctcccatgtaacagatgtacaatggccc
ctgaatctgctttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_30857062_30857779
seq2: B6Ng01-106E14.b_47_764

seq1  GAATTCAATATGTTGTCTTGAATGTTATCAGATAGCAATCAACTCATGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATATGTTGTCTTGAATGTTATCAGATAGCAATCAACTCATGGA  50

seq1  CCCAGGTGGAAAACCTCCAGTATTGACTGCATATATTACAGCACAAATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGTGGAAAACCTCCAGTATTGACTGCATATATTACAGCACAAATCC  100

seq1  ATTTTCAACAGAAATGAGGAAGGAGAAGAAGGCATAAGACAGGAAATGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAACAGAAATGAGGAAGGAGAAGAAGGCATAAGACAGGAAATGAG  150

seq1  AACCTAGCTTAGAATATAGGGCTCTTTTTTTATTTTAAGGAAGGGGCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAGCTTAGAATATAGGGCTCTTTTTTTATTTTAAGGAAGGGGCAAG  200

seq1  TTAAGAGAAGACTACTCCCGCCTCGTAAATGGCTTTTTAAGAATGCGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAGAAGACTACTCCCGCCTCGTAAATGGCTTTTTAAGAATGCGTAT  250

seq1  GGGTGTTTTACCTACATGCGTGTCTGCGCAACACTTGAGTGCAATGATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTTTTACCTACATGCGTGTCTGCGCAACACTTGAGTGCAATGATCA  300

seq1  CAGAAGCCAGAGAGGGCATCAGATACCCTAGGATTGGAAATAGAGAGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCCAGAGAGGGCATCAGATACCCTAGGATTGGAAATAGAGAGCTG  350

seq1  TCAGCCACCATGTGGGTGCTGGGAATCAAATTCTCATTCTTTGGGAGAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCACCATGTGGGTGCTGGGAATCAAATTCTCATTCTTTGGGAGAGC  400

seq1  AACCGGTCCTCTTAATTGCTGAGCCTCATCTCCAGCCCCTCAAATAGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGGTCCTCTTAATTGCTGAGCCTCATCTCCAGCCCCTCAAATAGCAT  450

seq1  CTTGTAAGAGAACAAATCTCCTTTGCAGAACAAGTTATCAGTAAGTATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAAGAGAACAAATCTCCTTTGCAGAACAAGTTATCAGTAAGTATTA  500

seq1  AGAATACTGGGGCTGGAGATGGCTCAGAGGTTAAGGTCAGTTGCTGCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATACTGGGGCTGGAGATGGCTCAGAGGTTAAGGTCAGTTGCTGCTCC  550

seq1  TGCAGAGGGCCTGGGTTTGTTTCTCAGCACCCACATGGCAGCTCACAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGGGCCTGGGTTTGTTTCTCAGCACCCACATGGCAGCTCACAACT  600

seq1  GCCTGTACCTCCAATTCCAGGGGATCCAGTGCCCTCTTCCTGCAGGCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTACCTCCAATTCCAGGGGATCCAGTGCCCTCTTCCTGCAGGCACT  650

seq1  TAGTGCACAATACATACATGCAGGCAATCTCTCTCTCTCTCTCTCTCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCACAATACATACATGCAGGCAATCTCTCTCTCTCTCTCTCTCTCT  700

seq1  CTCTCTCTCTCTCTCTCT  718
      ||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCT  718

seq1: chr16_30991556_30992684
seq2: B6Ng01-106E14.g_66_1180 (reverse)

seq1  AGAAAGCAAGAATTCAGGGGGCAATTGTACAATCTGTTACATGGGAGGGG  50
      ||||||||   ||||| ||||| ||||||| ||||||||||||||| |||
seq2  AGAAAGCA--GATTCA-GGGGCCATTGTAC-ATCTGTTACATGGGA-GGG  45

seq1  ACAAGGAGAGCAAGGGATGGAGAACAGGGCTCTGGGTCAGAAGGCCACAG  100
      ||| | ||||||| |||||||| |||||   |||| |||||| |||||||
seq2  ACAGGTAGAGCAA-GGATGGAG-ACAGG--CCTGGTTCAGAA-GCCACAG  90

seq1  TTTCAATCCTGGACACATATTTACAGGTTGAGACACATGGATGTCTTATT  150
      ||   ||||| |||||||||||||| ||||| |||||| |||||||||||
seq2  TT--CATCCT-GACACATATTTACAAGTTGA-ACACAT-GATGTCTTATT  135

seq1  TCTGGACACACATTTATGGGTTGAGACACATGGATGTCTGTCTTATTTCT  200
      ||| |||||||| ||||||||  |||||||| ||||||||||||||||||
seq2  TCT-GACACACA-TTATGGGTGAAGACACATAGATGTCTGTCTTATTTCT  183

seq1  GTCTTTCTGTACCTCTGCATCCCCCTCCGCTGTAATATGGGGACTGGAAC  250
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GTCTTTCTGTACCTCAGCATCCCCCTCCGCTGTAATATGGGGACTGGAAC  233

seq1  ACTGTTGACCT-CATGGAGTTGGGCTA-CCATCTGAGTGCTTGGGACAGT  298
        || |||||| ||||||||||||||| ||||||||||||||||||||||
seq2  CATG-TGACCTCCATGGAGTTGGGCTACCCATCTGAGTGCTTGGGACAGT  282

seq1  GACTGTCCTGTGTGATGCAGCCATTAAGTACAAGTTGTCATTGCTAC-AA  347
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GACTGTCCTGTGTGATGCAGCCATTAAGTACAAGTTGTCATTGCTACAAA  332

seq1  AGTAGGTTCTGCTCAGGACCAGGG-AACAGAGGGCTTTGGGGGCACTAAC  396
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AGTAGGTTCTGCTCAGGACCAGGGAAACAGAGGGCTTTGGGGGCACTAAC  382

seq1  GGCATCAGCCTTCACTGGGACGATGCTTAGAGCCTTCTCAAAATAAGTAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCAGCCTTCACTGGGACGATGCTTAGAGCCTTCTCAAAATAAGTAA  432

seq1  GAGCTGAAAGCCAGGGCAATGCCATGTTCTCATTCTTCCTTTTCTTAGAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGAAAGCCAGGGCAATGCCATGTTCTCATTCTTCCTTTTCTTAGAG  482

seq1  GCTTGGAACTGATACCACCCTGGAGAGGCCCTAAAATCCTTAGACACCAC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGAACTGATACCACCCTGGAGAGGCCCTAAAATCCTTAGACACCAC  532

seq1  CACTACCAACAACAATGGTGTTAGAGGCGCACGGGGGTGCAGCACAAGGG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACCAACAACAATGGTGTTAGAGGCGCACGGGGGTGCAGCACAAGGG  582

seq1  TATATAGTACTTGAAGGCTTGTGAAAAGCAATCTGCTCATCACTAAAGTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAGTACTTGAAGGCTTGTGAAAAGCAATCTGCTCATCACTAAAGTT  632

seq1  CAATCACCAATAGACACGGCAATGGAGACAGACTTCTGGGCAGGTAGTGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCACCAATAGACACGGCAATGGAGACAGACTTCTGGGCAGGTAGTGA  682

seq1  GCACCAGGTGGGTTTATTTCAGAGCCAAACAGTCCTGAAACATACAATAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCAGGTGGGTTTATTTCAGAGCCAAACAGTCCTGAAACATACAATAA  732

seq1  ACCATGACGCTCATCTTAGCAATGAAGAACACAAATGAAGACTGTCCAGA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGACGCTCATCTTAGCAATGAAGAACACAAATGAAGACTGTCCAGA  782

seq1  TTGTCTGATTGGTGCCAGGACATGATGTCAAGTTCAACTGTCAAACTGCT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTGATTGGTGCCAGGACATGATGTCAAGTTCAACTGTCAAACTGCT  832

seq1  TGGACTGCATCTAGGACATTGGGTATGCACACCTCTGGATGTGTAGAGAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTGCATCTAGGACATTGGGTATGCACACCTCTGGATGTGTAGAGAA  882

seq1  GGCCTGTCCCAGATGTGGGCACAGCCATCCCATAGGCTGGGGCCCCACCA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGTCCCAGATGTGGGCACAGCCATCCCATAGGCTGGGGCCCCACCA  932

seq1  GTGCCAGAATCTTCTTTCTCTGCTTCTCAGCCACAGACCAACTTGGCCCT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCAGAATCTTCTTTCTCTGCTTCTCAGCCACAGACCAACTTGGCCCT  982

seq1  AGACCCCTCCCTGATGTGTCATGCTGAACCCATGAGCCAAAATAAGTCTT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCCTCCCTGATGTGTCATGCTGAACCCATGAGCCAAAATAAGTCTT  1032

seq1  TCCTCCCCTAAGTTGCTTCTCTCAGTATTTGGTCACATGCATGATCATCT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCCTAAGTTGCTTCTCTCAGTATTTGGTCACATGCATGATCATCT  1082

seq1  TCCTGTCAAAGCTGATTTCTCGTTAATGAATTC  1129
      |||||||||||||||||||||||||||||||||
seq2  TCCTGTCAAAGCTGATTTCTCGTTAATGAATTC  1115