BAC Information

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BAC

Clone NameB6Ng01-107A02
Chromosome16 (Build37)
Map Location 31,023,398 - 31,185,321
singlet/doubletdoublet
Overlap geneAI480653, Centb2
Upstream gene9030404E10Rik, Hes1, EG547263, 1700025H01Rik, LOC100043110, Cpn2, Lrrc15, Gp5, Atp13a3, Tmem44, Lsg1, BC022623, LOC100043122
Downstream genePpp1r2, Apod, 1700007E05Rik, Bdh1, Gm536, Dlg1, Mfi2, LOC677155, Pigz, 0610012G03Rik, Ncbp2, Senp5, Pak2, Pigx, 1500031L02Rik, Lrrc33, Bex6
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107A02.bB6Ng01-107A02.g
ACCDH914589DH914590
length1,0931,064
definitionDH914589|Mus musculus domesticus DNA, BAC clone: B6Ng01-107A02, 5' end.DH914590|Mus musculus domesticus DNA, BAC clone: B6Ng01-107A02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,184,221 - 31,185,321)(31,023,398 - 31,024,450)
sequence
gaattcttagcaaaaactatttatgtttctgaatcttttgaaaagaagcc
caacattggaagttttaaaatagttatgttcttttagtaattaaaaaaaa
ccaaatccatacccttttaagtatggcagaaatctagttattacaataga
aaagttctatttcagttacaagcccatttaaatcaaaattccactcagaa
ttgtagaacagtattgtggagagcgtcttgcttgtcaatcagcttttgtg
tgagcagtctgtaatcttttctatgattacagcgcagatgcatggctgcc
gctgccttgctatgatctagcagatgtaaacaatggcctctcttttgatt
ggaatccagcagctgtcctctgatcatagggctagaaatggttattgaag
tcttgtgtgacgtatgtggaggtagatttgatcctaagaaacactaaccc
atgacttggtatctgcctaggaaccccatcccaatactaagaatgttttg
gtgtctgtctgcctatcatttttgagaaaggctcttactctgtagttctg
gcccaggacatgagctcgtcccatctctgcttctcgtgtgctaggattac
aggcatgtgccacggtaattgtctctgatgttaatgtttcctgggtcact
tgagaagtcacccatgcagtcacataggcagttctgaatcagatgtgttt
gtcagaatcatatgggaagcttttcccagaacactctcgggtcagtttag
gcctaccgagttagagtttggggcgggggtgggagcgagcatgagtcttg
ggcatagataccctgaagaagtatctatgtgggtcattctgatgtcaaca
gatagttacaggcacaacatacttttcttcctgctgcctttaactctgtt
ccttattttggcattgcaggaacaaatgtttttaaattgcaaatcagaat
gtttctagcactcaagtgttgtgaagatactgtttggcaatgtctctcac
tgctttataccacaccacgaagtccagggtcaactgcatagccaggccgg
cctacactgtaatatccattggtccacccagccttccaacccc
gaattccatgtcagaagaaaacagatgaaaagtgagtgttggcagtgtga
ctccacggttgacacgggactgcttatagcttttgaggcctcctcttgga
cctacatccaggtgagcggagaagaaaaactaggtagaagcagtagctcc
aaaccactcaaccccggcttctgcagcgccatcaacccagcctcaacctc
taaccctcaacccctcctcctttcccattccttattttgagaccagtgtg
agaagcttgtcctgctctccctagaaagcccactacatggcctctacatt
caacccagagttagaatggagtcctctgaaggactctgttatgccgagtg
gattgccgcagtcgccatgctgggcttgggagtgagaacgagccctgtat
atccagccatcaggaagagcgctgcactagatcagctgaggcccacgttc
acacacacacacacacacacacacacacacacacacacacacacacacac
acggtgggggggtgggcggaacgctcctgtactctcccagcggcacccca
catgctatggcaaaccttacattttaggggaacaggatggaacaacacag
gctgaccctgtaaccccggctcacagtccagagagtgagcagactggaag
aattttccagtggagaacacacaaggaaaatggagctgtgtcccctgact
ggatgctgtcttttgaatctcgggaacaaaggagctagggctttcccttg
ctgaggtcaggcctttggtgtaacaatcaatatataaaagcggattttta
gacaaaataagaagaaacccttcaaaagtcaaaacgtgcagagatggaag
accctgcctctgggtggctgcaccaacttggtcttagggcactgaacatc
ccctctgaagatcaaggtcctagagatgggaccaagtttctacttctaaa
cttctcttgatccagttcagcagcttccctctacaaatgcagtattcaac
cctgacgggaaagctcgtggatacagggtcagctgtgcccctatttaaac
cctatcctgactga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_31184221_31185321
seq2: B6Ng01-107A02.b_43_1135 (reverse)

seq1  GGGGTTGGGAGGGCTGGGGTGA-CAATGGATTATTACAAGTGTAAGGCCG  49
      |||||| ||| |||||||  || ||||||| |||||| ||||| ||||||
seq2  GGGGTT-GGAAGGCTGGGTGGACCAATGGA-TATTAC-AGTGT-AGGCCG  46

seq1  GCCTGGGCTATGCAGTGTGACCCTGGACTTCTGTGTGTGTGTGTATAAGG  99
      |||| ||||||||||| |||||||||||||| ||| ||||| |||||| |
seq2  GCCT-GGCTATGCAGT-TGACCCTGGACTTC-GTG-GTGTG-GTATAAAG  91

seq1  CAGTGGAGAGACATTGCCAAACAGTATCTTCACAACACTTGAGTGCTAGA  149
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGT-GAGAGACATTGCCAAACAGTATCTTCACAACACTTGAGTGCTAGA  140

seq1  AACATTCTGATTTGCAATTTAAAAACATTTGTT-CTGCAATGACAAAATA  198
      ||||||||||||||||||||||||||||||||| |||||||| |||||||
seq2  AACATTCTGATTTGCAATTTAAAAACATTTGTTCCTGCAATGCCAAAATA  190

seq1  AGGAACAGAGTTAAAGGCAGCAGGTAGAAAAGTATGTTGTGCCTGTAACT  248
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AGGAACAGAGTTAAAGGCAGCAGGAAGAAAAGTATGTTGTGCCTGTAACT  240

seq1  ATCTGTTGACATCAGAATGACCCACATAGATACTTCTTCAGGGTATCTAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTGACATCAGAATGACCCACATAGATACTTCTTCAGGGTATCTAT  290

seq1  GCCCAAGACTCATGCTCGCTCCCACCCCCGCCCCAAACTCTAACTCGGTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAGACTCATGCTCGCTCCCACCCCCGCCCCAAACTCTAACTCGGTA  340

seq1  GGCCTAAACTGACCCGAGAGTGTTCTGGGAAAAGCTTCCCATATGATTCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTAAACTGACCCGAGAGTGTTCTGGGAAAAGCTTCCCATATGATTCT  390

seq1  GACAAACACATCTGATTCAGAACTGCCTATGTGACTGCATGGGTGACTTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAACACATCTGATTCAGAACTGCCTATGTGACTGCATGGGTGACTTC  440

seq1  TCAAGTGACCCAGGAAACATTAACATCAGAGACAATTACCGTGGCACATG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTGACCCAGGAAACATTAACATCAGAGACAATTACCGTGGCACATG  490

seq1  CCTGTAATCCTAGCACACGAGAAGCAGAGATGGGACGAGCTCATGTCCTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAATCCTAGCACACGAGAAGCAGAGATGGGACGAGCTCATGTCCTG  540

seq1  GGCCAGAACTACAGAGTAAGAGCCTTTCTCAAAAATGATAGGCAGACAGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGAACTACAGAGTAAGAGCCTTTCTCAAAAATGATAGGCAGACAGA  590

seq1  CACCAAAACATTCTTAGTATTGGGATGGGGTTCCTAGGCAGATACCAAGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAAACATTCTTAGTATTGGGATGGGGTTCCTAGGCAGATACCAAGT  640

seq1  CATGGGTTAGTGTTTCTTAGGATCAAATCTACCTCCACATACGTCACACA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGTTAGTGTTTCTTAGGATCAAATCTACCTCCACATACGTCACACA  690

seq1  AGACTTCAATAACCATTTCTAGCCCTATGATCAGAGGACAGCTGCTGGAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTCAATAACCATTTCTAGCCCTATGATCAGAGGACAGCTGCTGGAT  740

seq1  TCCAATCAAAAGAGAGGCCATTGTTTACATCTGCTAGATCATAGCAAGGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATCAAAAGAGAGGCCATTGTTTACATCTGCTAGATCATAGCAAGGC  790

seq1  AGCGGCAGCCATGCATCTGCGCTGTAATCATAGAAAAGATTACAGACTGC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGCAGCCATGCATCTGCGCTGTAATCATAGAAAAGATTACAGACTGC  840

seq1  TCACACAAAAGCTGATTGACAAGCAAGACGCTCTCCACAATACTGTTCTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACAAAAGCTGATTGACAAGCAAGACGCTCTCCACAATACTGTTCTA  890

seq1  CAATTCTGAGTGGAATTTTGATTTAAATGGGCTTGTAACTGAAATAGAAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCTGAGTGGAATTTTGATTTAAATGGGCTTGTAACTGAAATAGAAC  940

seq1  TTTTCTATTGTAATAACTAGATTTCTGCCATACTTAAAAGGGTATGGATT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTATTGTAATAACTAGATTTCTGCCATACTTAAAAGGGTATGGATT  990

seq1  TGGTTTTTTTTAATTACTAAAAGAACATAACTATTTTAAAACTTCCAATG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTTTTTAATTACTAAAAGAACATAACTATTTTAAAACTTCCAATG  1040

seq1  TTGGGCTTCTTTTCAAAAGATTCAGAAACATAAATAGTTTTTGCTAAGAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCTTCTTTTCAAAAGATTCAGAAACATAAATAGTTTTTGCTAAGAA  1090

seq1  TTC  1101
      |||
seq2  TTC  1093

seq1: chr16_31023398_31024450
seq2: B6Ng01-107A02.g_68_1131

seq1  GAATTCCATGTCAGAAGAAAACAGATGAAAAGTGAGTGTTGGCAGTGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGTCAGAAGAAAACAGATGAAAAGTGAGTGTTGGCAGTGTGA  50

seq1  CTCCACGGTTGACACGGGACTGCTTATAGCTTTTGAGGCCTCCTCTTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACGGTTGACACGGGACTGCTTATAGCTTTTGAGGCCTCCTCTTGGA  100

seq1  CCTACATCCAGGTGAGCGGAGAAGAAAAACTAGGTAGAAGCAGTAGCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACATCCAGGTGAGCGGAGAAGAAAAACTAGGTAGAAGCAGTAGCTCC  150

seq1  AAACCACTCAACCCCGGCTTCTGCAGCGCCATCAACCCAGCCTCAACCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCACTCAACCCCGGCTTCTGCAGCGCCATCAACCCAGCCTCAACCTC  200

seq1  TAACCCTCAACCCCTCCTCCTTTCCCATTCCTTATTTTGAGACCAGTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCTCAACCCCTCCTCCTTTCCCATTCCTTATTTTGAGACCAGTGTG  250

seq1  AGAAGCTTGTCCTGCTCTCCCTAGAAAGCCCACTACATGGCCTCTACATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTTGTCCTGCTCTCCCTAGAAAGCCCACTACATGGCCTCTACATT  300

seq1  CAACCCAGAGTTAGAATGGAGTCCTCTGAAGGACTCTGTTATGCCGAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCAGAGTTAGAATGGAGTCCTCTGAAGGACTCTGTTATGCCGAGTG  350

seq1  GATTGCCGCAGTCGCCATGCTGGGCTTGGGAGTGAGAACGAGCCCTGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCCGCAGTCGCCATGCTGGGCTTGGGAGTGAGAACGAGCCCTGTAT  400

seq1  ATCCAGCCATCAGGAAGAGCGCTGCACTAGATCAGCTGAGGCCCACGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGCCATCAGGAAGAGCGCTGCACTAGATCAGCTGAGGCCCACGTTC  450

seq1  ACACACACACACACACACACACACACACACACACACACACACACACACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACACACACACACACAC  500

seq1  ACGGTGGGGGGGTGGGCGGAACGCTCCTGTACTCTCCCAGCGGCACCCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTGGGGGGGTGGGCGGAACGCTCCTGTACTCTCCCAGCGGCACCCCA  550

seq1  CATGCTATGGCAAACCTTACATTTTAGGGGAACAGGATGGAACAACACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTATGGCAAACCTTACATTTTAGGGGAACAGGATGGAACAACACAG  600

seq1  GCTGACCCTGTAACCCCGGCTCACAGTCCAGAGAGTGAGCAGACTGGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACCCTGTAACCCCGGCTCACAGTCCAGAGAGTGAGCAGACTGGAAG  650

seq1  AA-TTTCCAGTGGAGAACACACAAGGAAAATGGAGCTGTGTCCCCTGACT  699
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCCAGTGGAGAACACACAAGGAAAATGGAGCTGTGTCCCCTGACT  700

seq1  GGATGCTGTC-TTTGAATCTCGGGAACAAAGGAGCTA-GGCTT--CCCTG  745
      |||||||||| |||||||||||||||||||||||||| |||||  || ||
seq2  GGATGCTGTCTTTTGAATCTCGGGAACAAAGGAGCTAGGGCTTTCCCTTG  750

seq1  CTGAGGTCAGGCC-TTGGTGTAACAATCAATATATAAAAGCGGA-TTTTA  793
      ||||||||||||| |||||||||||||||||||||||||||||| |||||
seq2  CTGAGGTCAGGCCTTTGGTGTAACAATCAATATATAAAAGCGGATTTTTA  800

seq1  GACAAAATAAGAAGAAA-CCTTCAAAAGTCAAAACGTGCAGAGATGGAAG  842
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GACAAAATAAGAAGAAACCCTTCAAAAGTCAAAACGTGCAGAGATGGAAG  850

seq1  ACCCTGCCTCT-GGTGGCTGCACCAACTTGTCTTTAGGGCACTGAACATC  891
      ||||||||||| ||||||||||||||||||   |||||||||||||||||
seq2  ACCCTGCCTCTGGGTGGCTGCACCAACTTGGTCTTAGGGCACTGAACATC  900

seq1  CCCTCTG-AGATCAAAGGTCCTAGAGATGGGACCAAG-TTCTACCTCTAA  939
      ||||||| ||||| ||||||||||||||||||||||| |||||| |||||
seq2  CCCTCTGAAGATC-AAGGTCCTAGAGATGGGACCAAGTTTCTACTTCTAA  949

seq1  ACTTCTC-TGACCCAGTTCAGCAGC-TCCCTCTACAAATGCAGTATTCAA  987
      ||||||| ||| ||||||||||||| ||||||||||||||||||||||||
seq2  ACTTCTCTTGATCCAGTTCAGCAGCTTCCCTCTACAAATGCAGTATTCAA  999

seq1  CCCTGACGGGAAAGCACGTGGATTACAGGGTCAGCTGTG-CACTATTTAA  1036
      ||||||||||||||| |||||| |||||||||||||||| | ||||||||
seq2  CCCTGACGGGAAAGCTCGTGGA-TACAGGGTCAGCTGTGCCCCTATTTAA  1048

seq1  ACCCTAATCCTGACTGA  1053
      ||||| |||||||||||
seq2  ACCCT-ATCCTGACTGA  1064