BAC Information

Click to search

BAC

Clone NameB6Ng01-107K14
Chromosome16 (Build37)
Map Location 92,965,843 - 93,105,842
singlet/doubletdoublet
Overlap genenone
Upstream geneMrps6, Slc5a3, Kcne2, 1190017O12Rik, 4930563D23Rik, Kcne1, Dscr1, 2410124H12Rik, Clic6, Runx1, EG666023
Downstream geneLOC100040747, Setd4, LOC670912, Cbr1, EG435489, Cbr3, Dopey2, Morc3, Chaf1b, Cldn14, Sim2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107K14.bB6Ng01-107K14.g
ACCDH915064DH915065
length1,124166
definitionDH915064|Mus musculus domesticus DNA, BAC clone: B6Ng01-107K14, 5' end.DH915065|Mus musculus domesticus DNA, BAC clone: B6Ng01-107K14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,104,699 - 93,105,842)(92,965,843 - 92,966,008)
sequence
gaattcactgtgtgtgaagtgttgggatgcaggtgggggaagctccaaga
agggagtcagtgaaccagtgtgagtgtggtcaggccagatcaccccacca
caaaccttgtaagtttggaggaacacacagggaatgatgggactacccac
aaaggtagagcaaccaccctggcccccacggcctaggatagaaatacatg
gtttcgggagcccaagatgctatccataaatatgttcctgctgagggcca
tggcagggagggagtctgttctacaactttctcccaagctctgcttgttt
tattggtcatctttgggcttctttggcttatacatacaatatccctgcct
ctaccttagtctccccatgtgtctgtctgtccccttcctccttttataag
gacatacatcattctcagttaagacaactgtatagcagggtaccttatct
agttttatggataacattttttctcaaaagttatatattaaggttctggg
ggtcaggactttaatgaaagccctagaatgtcctagaatgttcttttggt
tattatagcagcgcctacagctcattcagaaaatccttacctacgcgcat
tcatgtgtccccatctcctctcatggaaagctggtttcccagtgctggtt
aagagtgcctttttctccttgaccaaggagatggagcctcaaagggacat
gactttataggactataatgaggtactataactccacccatgagggcagg
gcaggaaaagttcaagggtgcacactgagatctggttaaccttccagcct
gggtggtcttttttcatgcctgcctcaccattacaagaacctcccaaagg
tggccctagatcttgcttctgaaaagaggcactgggtagagagccagaaa
tcaacctaccctccattctatggctcagagagccgggctacctctgtgaa
caccaggagggctcagtcagaataaacagatgaaccaagctcccaactca
ctggcggtcagagctagatgctattctggggctgtcattcagaggatctt
cagacagtgctgcaagaatgcacagaagaaacattagcattagatcaaaa
tatatccacctcctcagacagcag
tcgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
ttgtgtgtgtgtgactgatcctgtatcaattgtgaatctgggaagacgaa
aaggaagcattctttgagagttcagagaatttattatcatccttcacaca
gatttgagctctagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_93104699_93105842
seq2: B6Ng01-107K14.b_44_1167 (reverse)

seq1  CTGCTGTCTTGAGAGTGTGTATATTTTTGTATCCTAATTGCTAAATTGTT  50
      |||||||| ||||   ||| |||| |||  || |||| ||||||  || |
seq2  CTGCTGTC-TGAGGAGGTGGATATATTTTGAT-CTAA-TGCTAA--TG-T  44

seq1  TTCTTCTGTGCATCTTTGCCAAGCACTGTCCTGAAGGTTCCTCTGAATGA  100
      |||||||||||||  ||||  |||||||| ||||| | ||||||||||||
seq2  TTCTTCTGTGCATTCTTGC--AGCACTGT-CTGAA-GATCCTCTGAATGA  90

seq1  CAGGCCCCAGAATAGCATCTTAGCCTCTTGACCGCCAGTGAGTTGGGGAG  150
      || |||||||||||||||| ||| ||| |||||||||||||||| |||||
seq2  CA-GCCCCAGAATAGCATC-TAG-CTC-TGACCGCCAGTGAGTT-GGGAG  135

seq1  CTTGGTTCATCTTGTTTATTCCTGACTGAGCCCCTCCCTGGTGTTCACAG  200
      ||||||||||| |||||||| ||||||||||||   ||||||||||||||
seq2  CTTGGTTCATC-TGTTTATT-CTGACTGAGCCC--TCCTGGTGTTCACAG  181

seq1  AGGTAGCCCGGCTTCTCTGAGCCATAGAATGGAGGGTAGGTTGATTTCTG  250
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGGTAGCCCGGC-TCTCTGAGCCATAGAATGGAGGGTAGGTTGATTTCTG  230

seq1  GCTCTCTACCCAGTGCCTCTTTTCAGAAGCAAGATCTAGGGCCACCTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTACCCAGTGCCTCTTTTCAGAAGCAAGATCTAGGGCCACCTTTG  280

seq1  GGAGGTTCTTGTAATGGTGAGGCAGGCATGAAAAAAGACCACCCAGGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTTCTTGTAATGGTGAGGCAGGCATGAAAAAAGACCACCCAGGCTG  330

seq1  GAAGGTTAACCAGATCTCAGTGTGCACCCTTGAACTTTTCCTGCCCTGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTTAACCAGATCTCAGTGTGCACCCTTGAACTTTTCCTGCCCTGCC  380

seq1  CTCATGGGTGGAGTTATAGTACCTCATTATAGTCCTATAAAGTCATGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGGGTGGAGTTATAGTACCTCATTATAGTCCTATAAAGTCATGTCC  430

seq1  CTTTGAGGCTCCATCTCCTTGGTCAAGGAGAAAAAGGCACTCTTAACCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAGGCTCCATCTCCTTGGTCAAGGAGAAAAAGGCACTCTTAACCAG  480

seq1  CACTGGGAAACCAGCTTTCCATGAGAGGAGATGGGGACACATGAATGCGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGAAACCAGCTTTCCATGAGAGGAGATGGGGACACATGAATGCGC  530

seq1  GTAGGTAAGGATTTTCTGAATGAGCTGTAGGCGCTGCTATAATAACCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTAAGGATTTTCTGAATGAGCTGTAGGCGCTGCTATAATAACCAAA  580

seq1  AGAACATTCTAGGACATTCTAGGGCTTTCATTAAAGTCCTGACCCCCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATTCTAGGACATTCTAGGGCTTTCATTAAAGTCCTGACCCCCAGA  630

seq1  ACCTTAATATATAACTTTTGAGAAAAAATGTTATCCATAAAACTAGATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTAATATATAACTTTTGAGAAAAAATGTTATCCATAAAACTAGATAA  680

seq1  GGTACCCTGCTATACAGTTGTCTTAACTGAGAATGATGTATGTCCTTATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACCCTGCTATACAGTTGTCTTAACTGAGAATGATGTATGTCCTTATA  730

seq1  AAAGGAGGAAGGGGACAGACAGACACATGGGGAGACTAAGGTAGAGGCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAGGAAGGGGACAGACAGACACATGGGGAGACTAAGGTAGAGGCAG  780

seq1  GGATATTGTATGTATAAGCCAAAGAAGCCCAAAGATGACCAATAAAACAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATTGTATGTATAAGCCAAAGAAGCCCAAAGATGACCAATAAAACAA  830

seq1  GCAGAGCTTGGGAGAAAGTTGTAGAACAGACTCCCTCCCTGCCATGGCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGCTTGGGAGAAAGTTGTAGAACAGACTCCCTCCCTGCCATGGCCC  880

seq1  TCAGCAGGAACATATTTATGGATAGCATCTTGGGCTCCCGAAACCATGTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAGGAACATATTTATGGATAGCATCTTGGGCTCCCGAAACCATGTA  930

seq1  TTTCTATCCTAGGCCGTGGGGGCCAGGGTGGTTGCTCTACCTTTGTGGGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATCCTAGGCCGTGGGGGCCAGGGTGGTTGCTCTACCTTTGTGGGT  980

seq1  AGTCCCATCATTCCCTGTGTGTTCCTCCAAACTTACAAGGTTTGTGGTGG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCATCATTCCCTGTGTGTTCCTCCAAACTTACAAGGTTTGTGGTGG  1030

seq1  GGTGATCTGGCCTGACCACACTCACACTGGTTCACTGACTCCCTTCTTGG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATCTGGCCTGACCACACTCACACTGGTTCACTGACTCCCTTCTTGG  1080

seq1  AGCTTCCCCCACCTGCATCCCAACACTTCACACACAGTGAATTC  1144
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCCCCCACCTGCATCCCAACACTTCACACACAGTGAATTC  1124

seq1: chr16_92965843_92966008
seq2: B6Ng01-107K14.g_74_239

seq1  TCGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  50

seq1  TTGTGTGTGTGTGACTGATCCTGTATCAATTGTGATTCTGGGAAGAGGAA  100
      ||||||||||||||||||||||||||||||||||| |||||||||| |||
seq2  TTGTGTGTGTGTGACTGATCCTGTATCAATTGTGAATCTGGGAAGACGAA  100

seq1  AAGGAAGCATTCTTTGAGAGTTCAGAGAATTTATTATCATCCTTCACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGCATTCTTTGAGAGTTCAGAGAATTTATTATCATCCTTCACACA  150

seq1  GATTTGAGCTCTAGTT  166
      ||||||||||||||||
seq2  GATTTGAGCTCTAGTT  166