BAC Information

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BAC

Clone NameB6Ng01-108E07
Chromosome16 (Build37)
Map Location 80,843,018 - 80,844,075
singlet/doubletsinglet
Overlap genenone
Upstream geneEG383172, 1700066C05Rik, LOC621365
Downstream geneLOC100039724, Ncam2, LOC621470
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108E07.bB6Ng01-108E07.g
ACCDH915497DH915498
length1,0501,161
definitionDH915497|Mus musculus domesticus DNA, BAC clone: B6Ng01-108E07, 5' end.DH915498|Mus musculus domesticus DNA, BAC clone: B6Ng01-108E07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatatacttctgcataaacttttgatagtgtctgggtagttata
tataacattatgcaaattgatcctaaatatgtttggcaaacaaacatagc
agctgaaattagagaattcatactctaaagtggtgagattctaaataaat
atacagaagtgtttggctaccagacataataataatacataacaggtcgt
tgtttcatctagacctttttgtactgcaaaggcagcaatcaataacaact
gctaatgacagccagtgacattttttcacagcactgacaaaaacatgtcc
taggcatactttagaagtacatatgcatctgtgtggagatctatggagaa
aaacattacaatgtgagaatagcaagacatttttgaaacttaaaatgtct
ttcatacatatgactagattattaaattttaaactatgaaattacttcta
aagtaatttttaacacgtgaactatatgctaaggagaggtttgatatatt
tttacacataattagtcaataaatgttcatttaaggtttcatgtagctct
tctttaactactaagaaaaatagtcatagtaaaatctaaaatcaaatatc
tcatggttcagaaatatatgaacaacataaaaaacattcagggatcaata
tgaggatgtgagggcattctgatcatctatctggtgaatgccctcactat
agaaatatatgagttgagtctcagtctctcagtctctcagtctctgtctc
tctttctctctctctctctcacacgtgcacacacacacacagacacacac
atacatatgtacacacacatacagacacacacatacatacatacaaacaa
acatacatgcacgtacacatgcataaactttgttaaacaaacaaaacatt
cattgaacatcatcactatgttaatcaccagctattcaaatagatgttaa
gatgtgttaagagagaatatattagcggtgggtataatgatagtcatttg
gagttagctaatactatgtcattttatatcatatagcagtagactctccc

gaattcactcctagtcactcccattctcggggtgtaatagtggggtgatg
ggcaagcaacgaatcgggagctgtcacgccatatcaggtgctgaaatgtc
acgctgcgggttataaaagcagcgccattttcccggttcgggatcttcct
gagaagcaagcaataaagcttttgccgcggaagattctggtttgttgcgt
ctttcttgccggtcgagcggcacgcaataagtggtgccgaaacccgggaa
ctgtcatcacaccggcgcaaggaagatccctcgttcgcagggcagaatca
gaaccgtgggacaaaaggctctacaaggtacgtacaatcttgaaatttct
ccagagttagaagcccttttgattgtttgcactgagattatgaggattgt
cagcaaatggtagaagcggggcagaaagttctggacgaaattcaagaaag
tctatcagaggtagagcggggagagaaagtaaaagtagagaggaaacaaa
gtgcactgaagaatttaggcctttccacgggccttgagcccgaggaaaag
agatataaaggaaagaatgccttgggagagataagaaaaagggatggaaa
gggagagaagaagggagatcgagctggagaggcacataaggaaaggagcc
tctacccgccactggatgaatttaagcagctagctcttagtagctcagaa
ccagatgaaggagttagtgcctctgaagaaacggactcggaggaggaagc
agttccttataagggaaaaaggtaccagcaagataaaatgtaagctactc
agtccagaaaaaggccaaaagcggctggcgaaagccagcttgctgctcgg
cctccggactgtcggcttcagggtcctagtgcacctccgctttatgtgca
gaggtagtggtcaatttttacctactctcatgtaggggtaaacccttgtg
cgtcaggccattacagtctggcaatggatgtcactcatatttcctctttg
ggagaagtcaatatttaaagtttctatgaaccctgctttgtgtatgttgc
ccaactttaacaggtgaaaagcttcatgttatcagcactgcagaagctgg
agtgctgggcagcccaatcaaatgatagggcgccattactctgcatataa
caattgtctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_80843018_80844075
seq2: B6Ng01-108E07.b_46_1095

seq1  GAATTCAATATACTTCTGCATAAACTTTTGATAGTGTCTGGGTAGTTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATATACTTCTGCATAAACTTTTGATAGTGTCTGGGTAGTTATA  50

seq1  TATAACATTATGCAAATTGATCCTAAATATGTTTGGCAAACAAACATAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACATTATGCAAATTGATCCTAAATATGTTTGGCAAACAAACATAGC  100

seq1  AGCTGAAATTAGAGAATTCATACTCTAAAGTGGTGAGATTCTAAATAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAAATTAGAGAATTCATACTCTAAAGTGGTGAGATTCTAAATAAAT  150

seq1  ATACAGAAGTGTTTGGCTACCAGACATAATAATAATACATAACAGGTCGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGAAGTGTTTGGCTACCAGACATAATAATAATACATAACAGGTCGT  200

seq1  TGTTTCATCTAGACCTTTTTGTACTGCAAAGGCAGCAATCAATAACAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCATCTAGACCTTTTTGTACTGCAAAGGCAGCAATCAATAACAACT  250

seq1  GCTAATGACAGCCAGTGACATTTTTTCACAGCACTGACAAAAACATGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATGACAGCCAGTGACATTTTTTCACAGCACTGACAAAAACATGTCC  300

seq1  TAGGCATACTTTAGAAGTACATATGCATCTGTGTGGAGATCTATGGAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCATACTTTAGAAGTACATATGCATCTGTGTGGAGATCTATGGAGAA  350

seq1  AAACATTACAATGTGAGAATAGCAAGACATTTTTGAAACTTAAAATGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTACAATGTGAGAATAGCAAGACATTTTTGAAACTTAAAATGTCT  400

seq1  TTCATACATATGACTAGATTATTAAATTTTAAACTATGAAATTACTTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATACATATGACTAGATTATTAAATTTTAAACTATGAAATTACTTCTA  450

seq1  AAGTAATTTTTAACACGTGAACTATATGCTAAGGAGAGGTTTGATATATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAATTTTTAACACGTGAACTATATGCTAAGGAGAGGTTTGATATATT  500

seq1  TTTACACATAATTAGTCAATAAATGTTCATTTAAGGTTTCATGTAGCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACACATAATTAGTCAATAAATGTTCATTTAAGGTTTCATGTAGCTCT  550

seq1  TCTTTAACTACTAAGAAAAATAGTCATAGTAAAATCTAAAATCAAATATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAACTACTAAGAAAAATAGTCATAGTAAAATCTAAAATCAAATATC  600

seq1  TCATGGTTCAGAAATATATGAACAACATAAAAAACATTCAGGGATCAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGTTCAGAAATATATGAACAACATAAAAAACATTCAGGGATCAATA  650

seq1  TGAGGATGTGAGGGCATTCTGATCATCTATCTGGTGAATGCCCTCACTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGATGTGAGGGCATTCTGATCATCTATCTGGTGAATGCCCTCACTAT  700

seq1  AGAAATATATGAGTTGAGTCTCAGTCTCTCAGTCTCTCAGTCTCTGTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATATATGAGTTGAGTCTCAGTCTCTCAGTCTCTCAGTCTCTGTCTC  750

seq1  TCTTTCTCTCTCTCTCTCTCACACGTGCACACACACACACAGACACACAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTCTCTCTCTCTCTCACACGTGCACACACACACACAGACACACAC  800

seq1  ATACATATGTACACACACATACAGACACACACATACATACATACAAACAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATATGTACACACACATACAGACACACACATACATACATACAAACAA  850

seq1  ACATACATGCACGTACACATGCATAAACTTTGTTAAACAAACAAAACATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACATGCACGTACACATGCATAAACTTTGTTAAACAAACAAAACATT  900

seq1  CATTGAACATCATCAACTATGTTAATCACCAGCTATTCAAAATAGATGTT  950
      |||||||||||||| ||||||||||||||||||||||| |||||||||||
seq2  CATTGAACATCATC-ACTATGTTAATCACCAGCTATTC-AAATAGATGTT  948

seq1  AAGATGTGTTAAGAGAGATATATATTTAGCGGTGGGTATAATGATAAGTC  1000
      |||||||||||||||||| ||||| |||||||||||||||||||| ||||
seq2  AAGATGTGTTAAGAGAGA-ATATA-TTAGCGGTGGGTATAATGAT-AGTC  995

seq1  ATTTGGAGTTAGCTTAATACTATGTCCATTTTATATCATAATAGCAGTAG  1050
      ||||||||||||| ||||||||||| ||||||||||||| ||||||||||
seq2  ATTTGGAGTTAGC-TAATACTATGT-CATTTTATATCAT-ATAGCAGTAG  1042

seq1  ACTCTCCC  1058
      ||||||||
seq2  ACTCTCCC  1050