BAC Information

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BAC

Clone NameB6Ng01-111P07
Chromosome16 (Build37)
Map Location 72,482,558 - 72,618,262
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneRobo1, LOC100039310, LOC100039318, LOC100039326
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-111P07.bB6Ng01-111P07.g
ACCDH918154DH918155
length1,120896
definitionDH918154|Mus musculus domesticus DNA, BAC clone: B6Ng01-111P07, 5' end.DH918155|Mus musculus domesticus DNA, BAC clone: B6Ng01-111P07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,482,558 - 72,483,690)(72,617,367 - 72,618,262)
sequence
gaattctattagtggaaagcttcaaacagcatcacctgctgtcattcttg
ataatgtatgcatattatttgacattagtttgtaatcaatttatacttaa
atagtccaagtatattctagtttttaatacttagagaaactaatttataa
tgaaattattttatcatttctcattttaatatacattggaaagataaata
tgcttgaatttatggtattctatacgttcattatatgatagctcataagt
aatactatataaactggcactaacatttttcatgttacaaagatgatgat
tgttcttccccaacattaggaaaataacaacttctctcttttttattgtt
atatttatttatttgtttactttacatcctgctcaccgtcagcctccccc
acaatccttcccacatgccaccctccccttctcctctgagtgggtggtgg
ctgcctggttatctccccatcctggaacatgaagtctctgagaggctagg
cacttcctctcccactaaggccacacaagacagtccagctagaacgtacc
ccgcatacaggcaacagcctttgagttagtccctgctccagttggatagg
gcccacatgaagaccaagctgaacatctactccctatttgcctggaggct
tagagccatcctgtgtatgttctttggttggtggttcagactctgagagc
cccaagggtccaggttagttgattttgttggtcttcctgtggagttctta
tcttagggactggaccccttcttgaataacttctctctttaggttaggtc
atactgacagttttccttcaatctttttaaagaatactttcatcttataa
gaacatcctagagaagagccccgtatatcagtatcctcttcatttcaaga
aacacatgtttacatttttttttagaaaaggactttcatctagagattct
catgaaggaaggatactatgggaaagaaatcatagaaattcccaggagag
atacctgaaactgtaaacccaaaagggatttatagaaagaatataaaaac
atttcaaaatacatgttcagggagcaaggtgaggaagaagaagctcaaaa
taacaaagcaaagttctaaa
gaattctatgggtgaaggatattacagatcatcagaaaggcaacgtcaga
gcaaagaggatttctctgggacctcctagattatctaaagtcatattgga
ggttagaagttgttactccattgcattttttcagcactacagtatttcaa
gcaagacagtatctctatgtttccctgtttctctcaaaacctaaaatcac
aaattcaaactgagagtgataaagcaggagttttgaataagcactattgt
tagaaacatttgttttggtatttgtgctgcagaagaggcaagatgtaaaa
tggatggtgttatccttggtcagctttcctaatgtaacctctctgtgcct
tagcttcctatgttacaactggataataacagcaacttactagtgttaga
tacatgtatatatagttacttactatatatgtgtgtatatatatatatat
atatatatatatatatatatatataaagatatatacataacttgctagtg
ttataatacatatatagttatagagactgtatatctggggtatggttgta
gaacatgcgtgtaacctcagaactctggagtctgaggcacgaggaatgac
ttgagtttgagtccagcctgtattgtgtggtgagcaccaggacacccagg
ggctacagagctaatcctttgtctctaaatatcaaaatcaacagtagtaa
ctaaaaataatattttaattgtatctaggctatgcaaatattactaaggt
aaaaacaaataaattgtacatatggaaaccattatgcaaatattaaaatg
tacattatttcttggattacttttatctacagacaatgagctcaaaattc
aattgttttctcagacagctaaaagagggtttatggttattttgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_72482558_72483690
seq2: B6Ng01-111P07.b_49_1168

seq1  GAATTCTATTAGTGGAAAGCTTCAAACAGCATCACCTGCTGTCATTCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTAGTGGAAAGCTTCAAACAGCATCACCTGCTGTCATTCTTG  50

seq1  ATAATGTATGCATATTATTTGACATTAGTTTGTAATCAATTTATACTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTATGCATATTATTTGACATTAGTTTGTAATCAATTTATACTTAA  100

seq1  ATAGTCCAAGTATATTCTAGTTTTTAATACTTAGAGAAACTAATTTATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCCAAGTATATTCTAGTTTTTAATACTTAGAGAAACTAATTTATAA  150

seq1  TGAAATTATTTTATCATTTCTCATTTTAATATACATTGGAAAGATAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTATTTTATCATTTCTCATTTTAATATACATTGGAAAGATAAATA  200

seq1  TGCTTGAATTTATGGTATTCTATACGTTCATTATATGATAGCTCATAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGAATTTATGGTATTCTATACGTTCATTATATGATAGCTCATAAGT  250

seq1  AATACTATATAAACTGGCACTAACATTTTTCATGTTACAAAGATGATGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTATATAAACTGGCACTAACATTTTTCATGTTACAAAGATGATGAT  300

seq1  TGTTCTTCCCCAACATTAGGAAAATAACAACTTCTCTCTTTTTTATTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTCCCCAACATTAGGAAAATAACAACTTCTCTCTTTTTTATTGTT  350

seq1  ATATTTATTTATTTGTTTACTTTACATCCTGCTCACCGTCAGCCTCCCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATTTATTTGTTTACTTTACATCCTGCTCACCGTCAGCCTCCCCC  400

seq1  ACAATCCTTCCCACATGCCACCCTCCCCTTCTCCTCTGAGTGGGTGGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCCTTCCCACATGCCACCCTCCCCTTCTCCTCTGAGTGGGTGGTGG  450

seq1  CTGCCTGGTTATCTCCCCATCCTGGAACATGAAGTCTCTGAGAGGCTAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGGTTATCTCCCCATCCTGGAACATGAAGTCTCTGAGAGGCTAGG  500

seq1  CACTTCCTCTCCCACTAAGGCCACACAAGACAGTCCAGCTAGAACGTACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCCTCTCCCACTAAGGCCACACAAGACAGTCCAGCTAGAACGTACC  550

seq1  CCGCATACAGGCAACAGCCTTTGAGTTAGTCCCTGCTCCAGTTGGATAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCATACAGGCAACAGCCTTTGAGTTAGTCCCTGCTCCAGTTGGATAGG  600

seq1  GCCCACATGAAGACCAAGCTGAACATCTACTCCCTATTTGCCTGGAGGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACATGAAGACCAAGCTGAACATCTACTCCCTATTTGCCTGGAGGCT  650

seq1  TAGAGCCATCCTGTGTATGTTCTTTGGTTGGTGGTTCAGACTCTGAGAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCCATCCTGTGTATGTTCTTTGGTTGGTGGTTCAGACTCTGAGAGC  700

seq1  CCCAAGGGTCCAGGTTAGTTGATTTTGTTGGTCTTCCTGTGGAGTTCTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGGGTCCAGGTTAGTTGATTTTGTTGGTCTTCCTGTGGAGTTCTTA  750

seq1  TCTTAGGGACTGGACCCCTTCTTGAATAACTTCTCTCTTTAGGTTAGGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGGGACTGGACCCCTTCTTGAATAACTTCTCTCTTTAGGTTAGGTC  800

seq1  ATACTGACAGTTTTCCTTCAATCTTTTTAAAGAATACTTTCATCTTATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGACAGTTTTCCTTCAATCTTTTTAAAGAATACTTTCATCTTATAA  850

seq1  GAACATCCTAGAGAAGAGCCCCGTATATCAGTATCCTCTTCATTTCAAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATCCTAGAGAAGAGCCCCGTATATCAGTATCCTCTTCATTTCAAGA  900

seq1  AACACATGTTTACATTTTTTTTTAAGAAAAGGACTTTCATCTAGAGATTC  950
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AACACATGTTTACATTTTTTTTT-AGAAAAGGACTTTCATCTAGAGATTC  949

seq1  TCATGAAGGAAGGATACTATGGGAAAAGAAATCAATAAGAAATTCCCAGG  1000
      ||||||||||||||||||||||| ||||||||||   |||||||||||||
seq2  TCATGAAGGAAGGATACTATGGG-AAAGAAATCA--TAGAAATTCCCAGG  996

seq1  AGAGATACCTGAAACTGTAAAACCCAAAAGGGATTTATAGACAGAATATA  1050
      |||||||||||||||||| |||||||||||||||||||||| ||||||||
seq2  AGAGATACCTGAAACTGT-AAACCCAAAAGGGATTTATAGAAAGAATATA  1045

seq1  AAAACCATTTCCAAAATTACAATGTCCAGGGAGCAGGGTGAGGAAGAAGA  1100
      |||| ||||||  ||| ||| |||| ||||||||| ||||||||||||||
seq2  AAAA-CATTTC--AAAATAC-ATGTTCAGGGAGCAAGGTGAGGAAGAAGA  1091

seq1  GAGCCTCAAAAATAACAAAGGCAAAGTTCTAAA  1133
       || ||| ||||||||||| |||||||||||||
seq2  -AG-CTC-AAAATAACAAA-GCAAAGTTCTAAA  1120

seq1: chr16_72617367_72618262
seq2: B6Ng01-111P07.g_70_965 (reverse)

seq1  CTCAATAATAACCATAATACCTCTTTTATGCTGTCTTGAGAAAAACAATT  50
      ||||| |||||||||||  ||||||||| |||||| |||| ||||||| |
seq2  CTCAA-AATAACCATAAACCCTCTTTTA-GCTGTC-TGAG-AAAACAA-T  45

seq1  TGTATTTCTGAGCTCATTGTCTGTAGTATAAAGTAATACAAGAAATAATG  100
      || |||| ||||||||||||||||||   |||||||| ||||||||||||
seq2  TGAATTT-TGAGCTCATTGTCTGTAGATAAAAGTAATCCAAGAAATAATG  94

seq1  TACATTTTAATATTTGCATATTGGTTT-CATATGTAC-ATTTATTTG-TT  147
      |||||||||||||||||||| |||||| ||||||||| ||||||||| ||
seq2  TACATTTTAATATTTGCATAATGGTTTCCATATGTACAATTTATTTGTTT  144

seq1  TTACCTTAGTAATATTTGCATAGCCTAGGTGCAATTAAAATATTA-TTTT  196
      |||||||||||||||||||||||||||| | |||||||||||||| ||||
seq2  TTACCTTAGTAATATTTGCATAGCCTAGATACAATTAAAATATTATTTTT  194

seq1  AGTTACTACTGTTGATTTTGATATTTTGAGAC-AAGGATTAGCTCTGTAG  245
      |||||||||||||||||||||||||| ||||| |||||||||||||||||
seq2  AGTTACTACTGTTGATTTTGATATTTAGAGACAAAGGATTAGCTCTGTAG  244

seq1  -CCCTGGGTGTCCTGGTGCTCACCACACAATACAGGCTGGACTCAAACTC  294
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGGGTGTCCTGGTGCTCACCACACAATACAGGCTGGACTCAAACTC  294

seq1  AAGTCATTCCTCGTGCCTCAGACTCCAGAGTTCTGAGGTTACAAGCATGT  344
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAGTCATTCCTCGTGCCTCAGACTCCAGAGTTCTGAGGTTACACGCATGT  344

seq1  TCTACAACCATACCCCAGATATACAGTCTCTATAACTATATATGTATTAT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAACCATACCCCAGATATACAGTCTCTATAACTATATATGTATTAT  394

seq1  AACACTAGCAAGTTATGTATATAACTTTATATATATATATATATATATAT  444
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AACACTAGCAAGTTATGTATATATCTTTATATATATATATATATATATAT  444

seq1  ATATATATATATATATACACACATATATAGTAAGTAACTATATATACATG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATACACACATATATAGTAAGTAACTATATATACATG  494

seq1  TATCTAACACTAGTAAGTTGCTGTTATTATCCAGTTGTAACATAGGAAGC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAACACTAGTAAGTTGCTGTTATTATCCAGTTGTAACATAGGAAGC  544

seq1  TAAGGCACAGAGAGGTTACATTAGGAAAGCTGACCAAGGATAACACCATC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCACAGAGAGGTTACATTAGGAAAGCTGACCAAGGATAACACCATC  594

seq1  CATTTTACATCTTGCCTCTTCTGCAGCACAAATACCAAAACAAATGTTTC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTACATCTTGCCTCTTCTGCAGCACAAATACCAAAACAAATGTTTC  644

seq1  TAACAATAGTGCTTATTCAAAACTCCTGCTTTATCACTCTCAGTTTGAAT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAATAGTGCTTATTCAAAACTCCTGCTTTATCACTCTCAGTTTGAAT  694

seq1  TTGTGATTTTAGGTTTTGAGAGAAACAGGGAAACATAGAGATACTGTCTT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATTTTAGGTTTTGAGAGAAACAGGGAAACATAGAGATACTGTCTT  744

seq1  GCTTGAAATACTGTAGTGCTGAAAAAATGCAATGGAGTAACAACTTCTAA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGAAATACTGTAGTGCTGAAAAAATGCAATGGAGTAACAACTTCTAA  794

seq1  CCTCCAATATGACTTTAGATAATCTAGGAGGTCCCAGAGAAATCCTCTTT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAATATGACTTTAGATAATCTAGGAGGTCCCAGAGAAATCCTCTTT  844

seq1  GCTCTGACGTTGCCTTTCTGATGATCTGTAATATCCTTCACCCATAGAAT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGACGTTGCCTTTCTGATGATCTGTAATATCCTTCACCCATAGAAT  894

seq1  TC  896
      ||
seq2  TC  896