BAC Information

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BAC

Clone NameB6Ng01-112C10
Chromosome16 (Build37)
Map Location 80,845,265 - 80,846,440
singlet/doubletsinglet
Overlap genenone
Upstream geneEG383172, 1700066C05Rik, LOC621365
Downstream geneLOC100039724, Ncam2, LOC621470
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112C10.bB6Ng01-112C10.g
ACCDH918296DH918297
length9951,179
definitionDH918296|Mus musculus domesticus DNA, BAC clone: B6Ng01-112C10, 5' end.DH918297|Mus musculus domesticus DNA, BAC clone: B6Ng01-112C10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccacatcagtttaacttggaaaattgcataaacatccagactgta
atacttttaatataagaaaggaaactactaggactgaaaagtttttctaa
ttcacttttgagtatgaagtaatactaagaggtcaatatacattcactta
aaaatatctcttttggaatggatacagaaaacatggtacatttacaaaat
aaagtaccatgcaactattaaaatcaatgaatttataaaattcttaaaca
aatggatggatctggaggatatcatcctgagtgaggtaacccaatcacaa
aagaacatacatgataatgctatcatatgatatcagtgataagcggatat
tagtccagaaaattagaatacccaagatataattagcaagacagatgaaa
ctaaagaagaaggaagaccaaagtgtggacacttccatccttcttagaag
gggaaacaatatatccatggaaggagttacaaagacacagtttggagcag
agactgaaggaatgaccatccagagactgacccacttggggatttatccc
ataaacaaccaccaaacccagacactactgtggatgccaacaagattttg
ctgacaggagcctgatatagctctcctgagaggctctgccagtgcctggc
aaatacagaagtggatgctcacagtcacccattggacagaacacagggtc
cccaaagaaggagctagagaaagtacccaaggaactgaatgaattagcag
ccctataggatgaacaacaatatgaactaaccagtacccccagagctcct
tggactaaaccaccaatcaaagaaaacaagtggtgggactcatgtgtcta
gctgcatatgtagcacaggatggcctagtcatcaatgggaggagaggccc
ttggtcttgtgaaggtcctatgcccagtatagggaatgccagaccaagaa
gcacaagtgggtgggtaggggagcaggcggagggggggagggatt

gaattcacagattaagctttaaagccaaatggaagaacattagggaggat
aaggtgacctataccttgattgataagttctatctctgggggtctgagtg
atgctgtggttcaggctaactattattacttcgtggcaaagtgtggtagc
tcggaacctcttggcaccaagcttgtctcactgtccttgcacaagctggg
aggggtcccttttacataagcctatgatagctccagtaactgacttaccc
atttctgggaagtagcaactcaggcctcatctcctgaactgctaatctgt
agcctgccatggagtcagcctgtctcaggttaattcaccttcacatatat
acacatatatatgcagtctgaactcacttttaagtacaattaagtatttc
taactctttcctcaaaatgtttccccaatctttgtttttacctttattat
agaatcagatttttaaaaaaatgattcttatattgtctttgtcttctatt
ttgttcttatcccatattttaggaaacaaaatatgtatctctcacaagaa
caaatattcggatatatatttgagtgaatagattaacattttgcatatgg
gacgagagtaaaaatgtcagcgataacccgttcttccagttaattgtgag
acgtcagcaactttgctgttaggagagaaattgcagagggggaagagtca
aagccactctgcctctgagaagcacacgttaaatggtttagagcactgct
aatagattgaggccgaagtgtcataaaactttctttgcttatctctttta
agttttatgctctacatcctggatcttattattaattcttatattggcct
ctacttatgaattcacaactgctttgttctctcaaaggcactccagtttc
tctatattttatgtctggctttgctaaatcaattaagttcaattggattt
agctaaataagtcacaaaaaccaaatccagagtcttacattaacaaagca
gaccactgcattcttttcccaatgatatttagtagcctccaatattttct
ttcatatgaaagcacacttgatttattaatataaatctgtacatagaaat
aaattgaattagtcctaatcataggctgcatatctaaagaagaataaatg
tagtaaaagaagctctagtcattctatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_80845265_80846440
seq2: B6Ng01-112C10.g_69_1247

seq1  GAATTCACAGATTAAGCTTTAAAGCCAAATGGAAGAACATTAGGGAGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGATTAAGCTTTAAAGCCAAATGGAAGAACATTAGGGAGGAT  50

seq1  AAGGTGACCTATACCTTGATTGATAAGTTCTATCTCTGGGGGTCTGAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGACCTATACCTTGATTGATAAGTTCTATCTCTGGGGGTCTGAGTG  100

seq1  ATGCTGTGGTTCAGGCTAACTATTATTACTTCGTGGCAAAGTGTGGTAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGTGGTTCAGGCTAACTATTATTACTTCGTGGCAAAGTGTGGTAGC  150

seq1  TCGGAACCTCTTGGCACCAAGCTTGTCTCACTGTCCTTGCACAAGCTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGAACCTCTTGGCACCAAGCTTGTCTCACTGTCCTTGCACAAGCTGGG  200

seq1  AGGGGTCCCTTTTACATAAGCCTATGATAGCTCCAGTAACTGACTTACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTCCCTTTTACATAAGCCTATGATAGCTCCAGTAACTGACTTACCC  250

seq1  ATTTCTGGGAAGTAGCAACTCAGGCCTCATCTCCTGAACTGCTAATCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGGGAAGTAGCAACTCAGGCCTCATCTCCTGAACTGCTAATCTGT  300

seq1  AGCCTGCCATGGAGTCAGCCTGTCTCAGGTTAATTCACCTTCACATATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGCCATGGAGTCAGCCTGTCTCAGGTTAATTCACCTTCACATATAT  350

seq1  ACACATATATATGCAGTCTGAACTCACTTTTAAGTACAATTAAGTATTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATATATATGCAGTCTGAACTCACTTTTAAGTACAATTAAGTATTTC  400

seq1  TAACTCTTTCCTCAAAATGTTTCCCCAATCTTTGTTTTTACCTTTATTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCTTTCCTCAAAATGTTTCCCCAATCTTTGTTTTTACCTTTATTAT  450

seq1  AGAATCAGATTTTTAAAAAAATGATTCTTATATTGTCTTTGTCTTCTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCAGATTTTTAAAAAAATGATTCTTATATTGTCTTTGTCTTCTATT  500

seq1  TTGTTCTTATCCCATATTTTAGGAAACAAAATATGTATCTCTCACAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTTATCCCATATTTTAGGAAACAAAATATGTATCTCTCACAAGAA  550

seq1  CAAATATTCGGATATATATTTGAGTGAATAGATTAACATTTTGCATATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATTCGGATATATATTTGAGTGAATAGATTAACATTTTGCATATGG  600

seq1  GACGAGAGTAAAAATGTCAGCGATAACCCGTTCTTCCAGTTAATTGTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGAGAGTAAAAATGTCAGCGATAACCCGTTCTTCCAGTTAATTGTGAG  650

seq1  ACGTCAGCAACTTTGCTGTTAGGAGAGAAATTGCAGAGGGGGAAGAGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCAGCAACTTTGCTGTTAGGAGAGAAATTGCAGAGGGGGAAGAGTCA  700

seq1  AAGCCACTCTGCCTCTGAGAAGCACACGTTAAATGGTTTAGAGCACTGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCACTCTGCCTCTGAGAAGCACACGTTAAATGGTTTAGAGCACTGCT  750

seq1  AATAGATTGAGGCCGAAGTGTCATAAAACTTTCTTTGCTTATCTCTTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATTGAGGCCGAAGTGTCATAAAACTTTCTTTGCTTATCTCTTTTA  800

seq1  AGTTTTATGCTCTACATCCTGGATCTTATTATTAATTCTTATATTGGCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTATGCTCTACATCCTGGATCTTATTATTAATTCTTATATTGGCCT  850

seq1  CTACTTATGAATTCACAACTGCTTTGTTCTCTCAAAGGCACTCCAG-TTC  899
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CTACTTATGAATTCACAACTGCTTTGTTCTCTCAAAGGCACTCCAGTTTC  900

seq1  TCTATATTTTATGTCTGGCTTTGCTAAATCAATTAAGTTCAATTGGATTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATTTTATGTCTGGCTTTGCTAAATCAATTAAGTTCAATTGGATTT  950

seq1  AGCTAAATAAGTCAC-AAAACCAAATCCAGAAGTC-TACATTAACAAAGG  997
      ||||||||||||||| |||||||||||||| |||| |||||||||||| |
seq2  AGCTAAATAAGTCACAAAAACCAAATCCAG-AGTCTTACATTAACAAA-G  998

seq1  CAGACCACTGCATTC-TTTCCCAATGAATATTTAGTAGCCTCC-ATA-TT  1044
      ||||||||||||||| |||||||||| |||||||||||||||| ||| ||
seq2  CAGACCACTGCATTCTTTTCCCAATG-ATATTTAGTAGCCTCCAATATTT  1047

seq1  TCTTCAATATGAAAGCACACTTGATTTATT-ATATAAATCTGTACATAGA  1093
      ||||  |||||||||||||||||||||||| |||||||||||||||||||
seq2  TCTTTCATATGAAAGCACACTTGATTTATTAATATAAATCTGTACATAGA  1097

seq1  ATAAAATTG-ATTAGTCCTAAAATCATAGCCTGCATTATCTAAAG-AGAA  1141
      |  |||||| |||||||||  |||||||| ||||| ||||||||| ||||
seq2  AATAAATTGAATTAGTCCT--AATCATAGGCTGCA-TATCTAAAGAAGAA  1144

seq1  TAAAATGTAGTAAAAGAAAGCT-AAGTCATTC-ATGA  1176
      | |||||||||||||| |||||  |||||||| ||||
seq2  T-AAATGTAGTAAAAG-AAGCTCTAGTCATTCTATGA  1179


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