BAC Information

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BAC

Clone NameB6Ng01-112C15
Chromosome16 (Build37)
Map Location 69,543,232 - 69,689,421
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneSpeer2, EG664930, Gbe1, D16Ertd519e
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112C15.bB6Ng01-112C15.g
ACCDH918304DH918305
length1,1941,086
definitionDH918304|Mus musculus domesticus DNA, BAC clone: B6Ng01-112C15, 5' end.DH918305|Mus musculus domesticus DNA, BAC clone: B6Ng01-112C15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,688,201 - 69,689,421)(69,543,232 - 69,544,332)
sequence
gaattcactggcaaagattcaatcagttcttgctaattaacaaatttcaa
ttttttttgtactattttaatacaaatactctaagatgggattattttta
atgtatgaatgataacagagatttagaaattttaactgaattatcaagta
acaccctcttgcaaaaccaagggttaatattcttgtgtactattttactc
tccattggatttgaaactcatatcaaagaatattgatcagcatttgattt
gagccaaaataggtggtttcaagataaattaggagactgagaaaacacag
aatattatgaaaagcataagccaaagaagttgccttaaatgtaagaaaaa
aaagtcctctatgtcataaacattgggtcgatgacttctaatctcaagtg
tataacatgaagcttgattttcagtagttaaatgaaacaatatttaaaac
tattgctatctatatctaatacatatctatatccaatagtgaaaaccacc
cgaaagtaagataattaaaagtactttatatgctttcaacatttatcagt
gaattgtattttgttttgcttcataatgataaaaataatgtaatgttttc
acattctataaaaaagagatatatttcactataattttggaataattttc
agaaaaatgtatgtgaatacaaaggcattacttgacttgttagtaaacta
taaagttactatgtaccatatttaatttatttggataatgtgaaaatgtt
tttcatatgtactataaatgattattctaaaaatattttcttcttccttc
tacagtaggatataccaaaaatattttaagtgggcaaaatagtactcaca
gaaagtgattcaaatcagacacatgctgtgctagaagccaaacactttca
ttctttattttttttttattaatttaaagttgttttctcatagaaaagta
tattttactcttgaaagatttttctttctttcatttattgggaagaccag
aggtctcacaagtcattcacagctatggaaagaaacaaaaaaattccttc
gaaggtgatctatcttttattttcactaaaaacaataattgcttggatgg
aaaccatttgtatgcagcgatgtcggtatctttgggggtgcgggaaagga
tcctgccagagttaaacatacctagcttaatctgaataaaaaat
gaattcagtcagaagcctgaagaaaccagtttgaatcaggcaggttggag
aggagttggagccagcagagctgagtggaaccagccagccaaagttcaga
aagaactagaaagagtgagcttaatcaggagtaagcctctgagatgacac
ttacatcttgcaaataaaagttatttttatatttggtagacataagaata
atataatctttaaatctccaaggagcaacacgtaggtcatatttctgcct
ctgctaaatcatttgccaaatgcataatgccaaaaaagcaaagattaatg
atcattatctatgagcatgatcaagaaatgttcattttaacatactcctc
aatttccttattattgttatcagttataaaactaatttctcatactcatt
agccaagtctctgtataacagtacctcagtgcaaaattaagctgtttttt
ttttttttttcagctctcacaatttagaaaaaaaaaatcctactgggaac
cttgatatataacgcattactccaggaagagcctgctaagaaatgattgt
tttgccatggaatgctaggcaatcccagttctgtaggcctcagggtcttt
ttgccctttaccatgtggcaatgttttatttattgctgaacatatcaaat
tccaatgtattctaaggagcccaaagtgtgaggccatttgtttctcctga
gacaatatacaaaagttatagggaagaaaagaaaagataaatttctactt
cttgactattttctgagctgtttcaaagcttctgttttgtaaaaagaaaa
tcaataatcagaaaagacaacattccacattgtgtactccacatgcgtaa
atcaaagaaacaatgaatacctacagtactaatttgagcctcaaatgaga
aatcatgtcatcaaagcacatgcagtcttggatagtaagcaccacagatc
ttgggcatacaggaacaatcatattttttctctttgttctctttgctctt
tgatttacagtagaagcaacatcacattaggatgacctagcaacaccctt
gcacctaccactgagctactctcattctcttgaata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_69688201_69689421
seq2: B6Ng01-112C15.b_44_1237 (reverse)

seq1  ATTTATTTATTCAGATTTTATGCATAGGGATAAGTTATAACTCCTTGAGA  50
      |||| ||||||||||  ||| || ||||  || ||| ||||||  ||   
seq2  ATTT-TTTATTCAGA--TTAAGC-TAGG--TATGTT-TAACTC--TG---  38

seq1  CAGAGTATCTCATTTTCCACGACACCCCACAGATAACAGCAATTACGCTG  100
         || |||    ||||| ||   ||||| ||||| |  ||    |||||
seq2  -GCAGGATC---CTTTCC-CGCACCCCCAAAGATACCGACA---TCGCTG  80

seq1  CTATACAAAAGGTTTCCATCCAAGCAAATAATTTGTTTTTTAGTGAAAAA  150
      | ||||||| ||||||||||||||||| ||  ||| ||||||||| ||||
seq2  C-ATACAAATGGTTTCCATCCAAGCAATTA--TTG-TTTTTAGTG-AAAA  125

seq1  TAAAAGATAGATCACCTCTGAAGGGATATTTTTTGTTTCTTT-CATAACT  199
      |||||||||||||||||  ||||| || |||||||||||||| |||| ||
seq2  TAAAAGATAGATCACCTTCGAAGGAAT-TTTTTTGTTTCTTTCCATAGCT  174

seq1  GTGAATGACCTGTGAGACCCTCTGGTCTTCCC-ATAAATGAAAGAAAGAA  248
      ||||||||| ||||||| |||||||||||||| |||||||||||||||||
seq2  GTGAATGACTTGTGAGA-CCTCTGGTCTTCCCAATAAATGAAAGAAAGAA  223

seq1  AAATCTTTCAAGAGTAAAATATTACTTATTCTATGAGAAAACAACTTTAA  298
      ||||||||||||||||||||| ||||| ||||||||||||||||||||||
seq2  AAATCTTTCAAGAGTAAAATA-TACTT-TTCTATGAGAAAACAACTTTAA  271

seq1  ATTAATAAAAAAAAAATAAAGAATGAAAGTGTTTGGCTTCTAGCACAGCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATAAAAAAAAAATAAAGAATGAAAGTGTTTGGCTTCTAGCACAGCA  321

seq1  TGTGTCTGATTTGAATCACTTTCTGTGAGTACTATTTTGCCCACTTAAAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTGATTTGAATCACTTTCTGTGAGTACTATTTTGCCCACTTAAAA  371

seq1  TATTTTTGGTATATCCTACTGTAGAAGGAAGAAGAAAATATTTTTAGAAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTGGTATATCCTACTGTAGAAGGAAGAAGAAAATATTTTTAGAAT  421

seq1  AATCATTTATAGTACATATGAAAAACATTTTCACATTATCCAAATAAATT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATTTATAGTACATATGAAAAACATTTTCACATTATCCAAATAAATT  471

seq1  AAATATGGTACATAGTAACTTTATAGTTTACTAACAAGTCAAGTAATGCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGGTACATAGTAACTTTATAGTTTACTAACAAGTCAAGTAATGCC  521

seq1  TTTGTATTCACATACATTTTTCTGAAAATTATTCCAAAATTATAGTGAAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATTCACATACATTTTTCTGAAAATTATTCCAAAATTATAGTGAAA  571

seq1  TATATCTCTTTTTTATAGAATGTGAAAACATTACATTATTTTTATCATTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTCTTTTTTATAGAATGTGAAAACATTACATTATTTTTATCATTA  621

seq1  TGAAGCAAAACAAAATACAATTCACTGATAAATGTTGAAAGCATATAAAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCAAAACAAAATACAATTCACTGATAAATGTTGAAAGCATATAAAG  671

seq1  TACTTTTAATTATCTTACTTTCGGGTGGTTTTCACTATTGGATATAGATA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTAATTATCTTACTTTCGGGTGGTTTTCACTATTGGATATAGATA  721

seq1  TGTATTAGATATAGATAGCAATAGTTTTAAATATTGTTTCATTTAACTAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTAGATATAGATAGCAATAGTTTTAAATATTGTTTCATTTAACTAC  771

seq1  TGAAAATCAAGCTTCATGTTATACACTTGAGATTAGAAGTCATCGACCCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATCAAGCTTCATGTTATACACTTGAGATTAGAAGTCATCGACCCA  821

seq1  ATGTTTATGACATAGAGGACTTTTTTTTCTTACATTTAAGGCAACTTCTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTATGACATAGAGGACTTTTTTTTCTTACATTTAAGGCAACTTCTT  871

seq1  TGGCTTATGCTTTTCATAATATTCTGTGTTTTCTCAGTCTCCTAATTTAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTATGCTTTTCATAATATTCTGTGTTTTCTCAGTCTCCTAATTTAT  921

seq1  CTTGAAACCACCTATTTTGGCTCAAATCAAATGCTGATCAATATTCTTTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAACCACCTATTTTGGCTCAAATCAAATGCTGATCAATATTCTTTG  971

seq1  ATATGAGTTTCAAATCCAATGGAGAGTAAAATAGTACACAAGAATATTAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAGTTTCAAATCCAATGGAGAGTAAAATAGTACACAAGAATATTAA  1021

seq1  CCCTTGGTTTTGCAAGAGGGTGTTACTTGATAATTCAGTTAAAATTTCTA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGGTTTTGCAAGAGGGTGTTACTTGATAATTCAGTTAAAATTTCTA  1071

seq1  AATCTCTGTTATCATTCATACATTAAAAATAATCCCATCTTAGAGTATTT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCTGTTATCATTCATACATTAAAAATAATCCCATCTTAGAGTATTT  1121

seq1  GTATTAAAATAGTACAAAAAAAATTGAAATTTGTTAATTAGCAAGAACTG  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTAAAATAGTACAAAAAAAATTGAAATTTGTTAATTAGCAAGAACTG  1171

seq1  ATTGAATCTTTGCCAGTGAATTC  1221
      |||||||||||||||||||||||
seq2  ATTGAATCTTTGCCAGTGAATTC  1194

seq1: chr16_69543232_69544332
seq2: B6Ng01-112C15.g_70_1155

seq1  GAATTCAGTCAGAAGCCTGAAGAAACCAGTTTGAATCAGGCAGGTTGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCAGAAGCCTGAAGAAACCAGTTTGAATCAGGCAGGTTGGAG  50

seq1  AGGAGTTGGAGCCAGCAGAGCTGAGTGGAACCAGCCAGCCAAAGTTCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTTGGAGCCAGCAGAGCTGAGTGGAACCAGCCAGCCAAAGTTCAGA  100

seq1  AAGAACTAGAAAGAGTGAGCTTAATCAGGAGTAAGCCTCTGAGATGACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACTAGAAAGAGTGAGCTTAATCAGGAGTAAGCCTCTGAGATGACAC  150

seq1  TTACATCTTGCAAATAAAAGTTATTTTTATATTTGGTAGACATAAGAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATCTTGCAAATAAAAGTTATTTTTATATTTGGTAGACATAAGAATA  200

seq1  ATATAATCTTTAAATCTCCAAGGAGCAACACGTAGGTCATATTTCTGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATCTTTAAATCTCCAAGGAGCAACACGTAGGTCATATTTCTGCCT  250

seq1  CTGCTAAATCATTTGCCAAATGCATAATGCCAAAAAAGCAAAGATTAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTAAATCATTTGCCAAATGCATAATGCCAAAAAAGCAAAGATTAATG  300

seq1  ATCATTATCTATGAGCATGATCAAGAAATGTTCATTTTAACATACTCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTATCTATGAGCATGATCAAGAAATGTTCATTTTAACATACTCCTC  350

seq1  AATTTCCTTATTATTGTTATCAGTTATAAAACTAATTTCTCATACTCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCCTTATTATTGTTATCAGTTATAAAACTAATTTCTCATACTCATT  400

seq1  AGCCAAGTCTCTGTATAACAGTACCTCAGTGCAAAATTAAGCTGTTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAGTCTCTGTATAACAGTACCTCAGTGCAAAATTAAGCTGTTTTTT  450

seq1  TTTTTTTTTTCAGCTCTCACAATTTAGAAAAAAAAAATCCTACTGGGAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTCAGCTCTCACAATTTAGAAAAAAAAAATCCTACTGGGAAC  500

seq1  CTTGATATATAACGCATTACTCCAGGAAGAGCCTGCTAAGAAATGATTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATATATAACGCATTACTCCAGGAAGAGCCTGCTAAGAAATGATTGT  550

seq1  TTTGCCATGGAATGCTAGGCAATCCCAGTTCTGTAGGCCTCAGGGTCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCATGGAATGCTAGGCAATCCCAGTTCTGTAGGCCTCAGGGTCTTT  600

seq1  TTGCCCTTTACCATGTGGCAATGTTTTATTTATTGCTGAACATATCAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCTTTACCATGTGGCAATGTTTTATTTATTGCTGAACATATCAAAT  650

seq1  TCCAATGTATTCTAAGGAGCCCAAAGTGTGAGGCCATTTGTTTCTCCTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATGTATTCTAAGGAGCCCAAAGTGTGAGGCCATTTGTTTCTCCTGA  700

seq1  GACAATATACAAAAGTTATAGGGAAGAAAAGAAAAGATAAATTTCTACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATATACAAAAGTTATAGGGAAGAAAAGAAAAGATAAATTTCTACTT  750

seq1  CTTGACTATTTTCTGAGCTGTTTCAAAGCTTCTGTTTTGTAAAAAGAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACTATTTTCTGAGCTGTTTCAAAGCTTCTGTTTTGTAAAAAGAAAA  800

seq1  TCAATAATCAGAAAAGACAACATTCCACATTGTGTACTCCACATGCGTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAATCAGAAAAGACAACATTCCACATTGTGTACTCCACATGCGTAA  850

seq1  ATCAAAGAAACAATGAATACCTACAGTACTAATTTGAGCCTCAAATGAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATCAAAGAAACAATGAATACCTACAGTACTAATTTGAGCCTCAAATGAG-  899

seq1  AAATCATGTCATCAAAGCACATGCAGTCTTGGATAGTAAGCACCACAGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATGTCATCAAAGCACATGCAGTCTTGGATAGTAAGCACCACAGAT  949

seq1  CTTGGCCATACAGGAACAATTCATATTTTTTTTCTTCTTTTGTTTCTCTT  1000
      ||||| ||||||||||||| ||||||||||| ||    |||| |||||||
seq2  CTTGGGCATACAGGAACAA-TCATATTTTTTCTC----TTTG-TTCTCTT  993

seq1  TGCTCTTTTGATTTTACAGTAGAAGCAAACATCACATTAGATTGAACCTA  1050
      ||||| ||||| |||||||||||||| |||||||||||||  || |||||
seq2  TGCTC-TTTGA-TTTACAGTAGAAGC-AACATCACATTAGGATG-ACCTA  1039

seq1  GCACACACACTTGCACTCTACCACTGAGCTATCTTCTCATTCCTCTGAAT  1100
      ||| |||| ||||||| ||||||||||||||   ||||||||   |||||
seq2  GCA-ACACCCTTGCAC-CTACCACTGAGCTA--CTCTCATTCTCTTGAAT  1085

seq1  A  1101
      |
seq2  A  1086