BAC Information

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BAC

Clone NameB6Ng01-112P15
Chromosome16 (Build37)
Map Location 12,679,021 - 12,800,987
singlet/doubletdoublet
Overlap geneEG622509
Upstream gene4933437K13Rik, LOC100043171, C530044N13Rik, 2700045P11Rik
Downstream geneLOC622553, Ercc4, Gt4-1, Mkl2, Parn, LOC100043196, 3110001I22Rik, Pla2g10, A930007A09Rik, LOC622757, Rrn3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112P15.bB6Ng01-112P15.g
ACCDH918894DH918895
length1,100891
definitionDH918894|Mus musculus domesticus DNA, BAC clone: B6Ng01-112P15, 5' end.DH918895|Mus musculus domesticus DNA, BAC clone: B6Ng01-112P15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,799,884 - 12,800,987)(12,679,021 - 12,679,909)
sequence
gaattctacaaggctgcttgtcaacctccaaactaccacagacgtgagat
ctttttatgagctgggcctctgctcatctgtagctggatcttaaaactct
ctgtgaagaataaaaggtacttaccgagaatgaatacatgttgtataatg
tcttactctcaatatgagcatagttatgtacaagacgctgcatggacagt
gggatcttggcttgaaattttctctctttccttatcttcctcttgccttt
tgtatcctcagctagaatgcttttcctgagctagagaacttaataccaaa
ttactgagaagtctgtctctggaagtagaaaagctcaacattttatttaa
atatgaagccatcatcaactgtgttgccatggagacccttcctcccatgt
gctcagcaacatgtctgctgccaattatccagaaataacttctctatttc
tatggagtattctgtttcacctactgctgcttctgcattctgtttgagct
tcggtgaaaagatgagggattttatttctatcccttgcagacaggaaagg
aaaattttaacatatccatcctgaaaaggatcccctactgtgtcacttcc
tgtgtaacattattacatatccccccttagctatagcagcatatgaaagg
tgatttcagatgacaagttgtgggaagttagtcctctttttctaccatgt
ggagcctggggatcaagttcaggaactcagatcattaagtctattggcaa
ataccctctcccacagagctatcccacagatctgtctgttgtgatatgct
aagtttcctgtctgtgccagcaacagggatggaagcactaggaaagactt
ttgaatcttctgcccagcttactggacagagatcaaagtcctcgtctacc
cttttccttcatgtttactgtacactgggcacttcagagggaatgtaatg
cagagactaaaggcaacacaaagaacagatcccaaagtactactggctgt
gtcttgagacaagggatgagagcaggctggccatgaagggtgcctcactt
taatgctaacctgaggaatcagttgcaatatttcccatccattaagagct

gaattccaagcatcctctggtaaatttaagcagctcagcttttgttgtct
ccctacctttggagatgtcctcctcatagctgccagttcctctgctgctg
actaatctctatatgtgaacctctgaatgcccccatggttcagggctgct
cattagcctgagctcgcttctttctctcctcttccccatttgagttggac
agagtttttattgttctacagatacatgggaggaattacttaaaaggagg
gactacagctcagctcatgtttcagtccatggatggtcagctgaccccat
ggtgatctagtacatagaataaagggcagttgaccctaatgggaaaactc
ccaactactcaaccccgaggaagtacagaagagggagaaggggttacaca
ttgaaaggcacatctcttagacacatacttcacacagacacctcacagtt
caaccatctctcaacaggctgtgaagactgctgacgaggccagagtcttc
attatctaaccatccctgcgaaatcctccaagatacattcaagggtgtgc
ttcattaatcttctggatagctctcaatccaatctggttgataaggtgaa
ccactgagctttctccacatgtagaaaagggactacttgagaaaagggtg
ggtctagggggagggagctaggggggaacagaaacgttggggtgtgggta
agagcaaagcctacaatgcccctataatgaaaatgttataatggagtcca
atcatattgttcacaatgaattacccatgtaaatagaagcatacattagg
gttacagaatctctaaagtttatttcaacatctttgattttgggatattc
aatcctgtatgctgacttgggggtttgtttatattgtttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_12799884_12800987
seq2: B6Ng01-112P15.b_43_1142 (reverse)

seq1  AGCTCTTAAT-GATGTGAAATATTTGCAACCTGATTCCCTCAGCTAAGCA  49
      |||||||||| |||| |||||| |||||| |||||| |||||| | ||||
seq2  AGCTCTTAATGGATGGGAAATA-TTGCAA-CTGATT-CCTCAGGTTAGCA  47

seq1  TCTAAAGTGAGGCACCCTCATTGGCCAGCCCTGCTCTTCATCCCTTTGTC  99
      | ||||||||||||||||   ||||||| ||||||| ||||||| |||||
seq2  T-TAAAGTGAGGCACCCTTCATGGCCAG-CCTGCTC-TCATCCC-TTGTC  93

seq1  TC-AGACACAGCCAGTAGTACTTTGGGATCTGTTCTTTGGTGTTGCC-TT  147
      || ||||||||||||||||||||||||||||||||||| |||||||| ||
seq2  TCAAGACACAGCCAGTAGTACTTTGGGATCTGTTCTTT-GTGTTGCCTTT  142

seq1  AGTCTTCTGCATTACATTCCCTCTGAAGTGCCCAGTGTACAGTAAACATG  197
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTC-TCTGCATTACATTCCCTCTGAAGTGCCCAGTGTACAGTAAACATG  191

seq1  AAGGAAAAGGGTAGACGA-GACTTTGATCTCTGTCCAGTAAGCTGGGCAG  246
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AAGGAAAAGGGTAGACGAGGACTTTGATCTCTGTCCAGTAAGCTGGGCAG  241

seq1  AAGATTCAAAAGTCTTTCCTAGTGCTTCCATCCCTGTTGCTGGCACAGAC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTCAAAAGTCTTTCCTAGTGCTTCCATCCCTGTTGCTGGCACAGAC  291

seq1  AGGAAACTTAGCATATCACAACAGACAGATCTGTGGGATAGCTCTGTGGG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAACTTAGCATATCACAACAGACAGATCTGTGGGATAGCTCTGTGGG  341

seq1  AGAGGGTATTTGCCAATAGACTTAATGATCTGAGTTCCTGAACTTGATCC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGTATTTGCCAATAGACTTAATGATCTGAGTTCCTGAACTTGATCC  391

seq1  CCAGGCTCCACATGGTAGAAAAAGAGGACTAACTTCCCACAACTTGTCAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTCCACATGGTAGAAAAAGAGGACTAACTTCCCACAACTTGTCAT  441

seq1  CTGAAATCACCTTTCATATGCTGCTATAGCTAAGGGGGGATATGTAATAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATCACCTTTCATATGCTGCTATAGCTAAGGGGGGATATGTAATAA  491

seq1  TGTTACACAGGAAGTGACACAGTAGGGGATCCTTTTCAGGATGGATATGT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACACAGGAAGTGACACAGTAGGGGATCCTTTTCAGGATGGATATGT  541

seq1  TAAAATTTTCCTTTCCTGTCTGCAAGGGATAGAAATAAAATCCCTCATCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTTTCCTTTCCTGTCTGCAAGGGATAGAAATAAAATCCCTCATCT  591

seq1  TTTCACCGAAGCTCAAACAGAATGCAGAAGCAGCAGTAGGTGAAACAGAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACCGAAGCTCAAACAGAATGCAGAAGCAGCAGTAGGTGAAACAGAA  641

seq1  TACTCCATAGAAATAGAGAAGTTATTTCTGGATAATTGGCAGCAGACATG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCATAGAAATAGAGAAGTTATTTCTGGATAATTGGCAGCAGACATG  691

seq1  TTGCTGAGCACATGGGAGGAAGGGTCTCCATGGCAACACAGTTGATGATG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGAGCACATGGGAGGAAGGGTCTCCATGGCAACACAGTTGATGATG  741

seq1  GCTTCATATTTAAATAAAATGTTGAGCTTTTCTACTTCCAGAGACAGACT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCATATTTAAATAAAATGTTGAGCTTTTCTACTTCCAGAGACAGACT  791

seq1  TCTCAGTAATTTGGTATTAAGTTCTCTAGCTCAGGAAAAGCATTCTAGCT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTAATTTGGTATTAAGTTCTCTAGCTCAGGAAAAGCATTCTAGCT  841

seq1  GAGGATACAAAAGGCAAGAGGAAGATAAGGAAAGAGAGAAAATTTCAAGC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATACAAAAGGCAAGAGGAAGATAAGGAAAGAGAGAAAATTTCAAGC  891

seq1  CAAGATCCCACTGTCCATGCAGCGTCTTGTACATAACTATGCTCATATTG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATCCCACTGTCCATGCAGCGTCTTGTACATAACTATGCTCATATTG  941

seq1  AGAGTAAGACATTATACAACATGTATTCATTCTCGGTAAGTACCTTTTAT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAAGACATTATACAACATGTATTCATTCTCGGTAAGTACCTTTTAT  991

seq1  TCTTCACAGAGAGTTTTAAGATCCAGCTACAGATGAGCAGAGGCCCAGCT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCACAGAGAGTTTTAAGATCCAGCTACAGATGAGCAGAGGCCCAGCT  1041

seq1  CATAAAAAGATCTCACGTCTGTGGTAGTTT-CAGGTTGACAAGCAGCCTT  1095
      ||||||||||||||||||||||||||||||  ||||||||||||||||||
seq2  CATAAAAAGATCTCACGTCTGTGGTAGTTTGGAGGTTGACAAGCAGCCTT  1091

seq1  GTAGAATTC  1104
      |||||||||
seq2  GTAGAATTC  1100

seq1: chr16_12679021_12679909
seq2: B6Ng01-112P15.g_67_956

seq1  GAATTCCAAGCATCCTCTGGTAAATTTAAGCAGCTCAGCTTTTGTTGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGCATCCTCTGGTAAATTTAAGCAGCTCAGCTTTTGTTGTCT  50

seq1  CCCTACCTTTGGAGATGTCCTCCTCATAGCTGCCAGTTCCTCTGCTGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTACCTTTGGAGATGTCCTCCTCATAGCTGCCAGTTCCTCTGCTGCTG  100

seq1  ACTAATCTCTATATGTGAACCTCTGAATGCCCCCATGGTTCAGGGCTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATCTCTATATGTGAACCTCTGAATGCCCCCATGGTTCAGGGCTGCT  150

seq1  CATTAGCCTGAGCTCGCTTCTTTCTCTCCTCTTCCCCATTTGAGTTGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGCCTGAGCTCGCTTCTTTCTCTCCTCTTCCCCATTTGAGTTGGAC  200

seq1  AGAGTTTTTATTGTTCTACAGATACATGGGAGGAATTACTTAAAAGGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTTTATTGTTCTACAGATACATGGGAGGAATTACTTAAAAGGAGG  250

seq1  GACTACAGCTCAGCTCATGTTTCAGTCCATGGATGGTCAGCTGACCCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTACAGCTCAGCTCATGTTTCAGTCCATGGATGGTCAGCTGACCCCAT  300

seq1  GGTGATCTAGTACATAGAATAAAGGGCAGTTGACCCTAATGGGAAAACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATCTAGTACATAGAATAAAGGGCAGTTGACCCTAATGGGAAAACTC  350

seq1  CCAACTACTCAACCCCGAGGAAGTACAGAAGAGGGAGAAGGGGTTACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTACTCAACCCCGAGGAAGTACAGAAGAGGGAGAAGGGGTTACACA  400

seq1  TTGAAAGGCACATCTCTTAGACACATACTTCACACAGACACCTCACAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGGCACATCTCTTAGACACATACTTCACACAGACACCTCACAGTT  450

seq1  CAACCATCTCTCAACAGGCTGTGAAGACTGCTGACGAGGCCAGAGTCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCATCTCTCAACAGGCTGTGAAGACTGCTGACGAGGCCAGAGTCTTC  500

seq1  ATTATCTAACCATCCCTGCGAAATCCTCCAAGATACATTCAAGGGTGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTAACCATCCCTGCGAAATCCTCCAAGATACATTCAAGGGTGTGC  550

seq1  TTCATTAATCTTCTGGATAGCTCTCAATCCAATCTGGTTGATAAGGTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTAATCTTCTGGATAGCTCTCAATCCAATCTGGTTGATAAGGTGAA  600

seq1  CCACTGAGCTTTCTCCACATGTAGAAAAGGGACTACTTGAGAAAAGGGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGAGCTTTCTCCACATGTAGAAAAGGGACTACTTGAGAAAAGGGTG  650

seq1  GGTCTAGGGGGAGGGAGCTAGGGGGGAACAGAAACGTTGGGGTGTGGGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTAGGGGGAGGGAGCTAGGGGGGAACAGAAACGTTGGGGTGTGGGTA  700

seq1  AGAGCAAAGCCTACAATGCCCCTAT-ATGAAAATGTTATAATGGAGTCC-  748
      ||||||||||||||||||||||||| ||||||||||||||||||||||| 
seq2  AGAGCAAAGCCTACAATGCCCCTATAATGAAAATGTTATAATGGAGTCCA  750

seq1  ATCATATTGTTCACAATGAATTACCCATGTAAATAGAAGCATACATTA-G  797
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ATCATATTGTTCACAATGAATTACCCATGTAAATAGAAGCATACATTAGG  800

seq1  GTTACAGAATCTCTAAAGTTTATTTCAAACATCTTTGAGTTTGGGATTAT  847
      |||||||||||||||||||||||||| ||||||||||| ||||||| |||
seq2  GTTACAGAATCTCTAAAGTTTATTTC-AACATCTTTGATTTTGGGA-TAT  848

seq1  TCAAATCCTGTATGCTGAC-TGGGGGTTTGTTTTGTTTGTTTC  889
      || |||||||||||||||| |||||||||||||   |||||||
seq2  TC-AATCCTGTATGCTGACTTGGGGGTTTGTTTATATTGTTTC  890