BAC Information

Click to search

BAC

Clone NameB6Ng01-113K15
Chromosome16 (Build37)
Map Location 36,759,155 - 36,891,905
singlet/doubletdoublet
Overlap geneSlc15a2, LOC667023, Eaf2, Iqcb1, LOC628101, Golgb1
Upstream geneDirc2, Hspbap1, Parp14, LOC667133, LOC100043217, Dtx3l, Parp9, Kpna1, Wdr5b, 2310056P07Rik, Ccdc58, Csta, Stfa2l1, EG433016, EG627962, EG408196, 2010005H15Rik, Stfa1, EG209324, LOC100038854, BC100530, LOC639105, Stfa2, Stfa3, Casr, EG667232, Cd86, Ildr1, LOC667246
Downstream geneHcls1, Fbxo40, LOC100043252, Polq, Stxbp5l, Gtf2e1, Rabl3, Hgd, Ndufb4, LOC100043709, Fstl1, LOC100043264, Lrrc58
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113K15.bB6Ng01-113K15.g
ACCDH919400DH919401
length1,0921,090
definitionDH919400|Mus musculus domesticus DNA, BAC clone: B6Ng01-113K15, 5' end.DH919401|Mus musculus domesticus DNA, BAC clone: B6Ng01-113K15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(36,759,155 - 36,760,251)(36,890,814 - 36,891,905)
sequence
gaattctgtcaaacatggagaaatagaaacaggtgaatgctacatcagaa
ggaataaccattctgtagaaacatcccagctctgagttgtcgccaagctg
ggcaaactgagtatgtaaacttggtacgtaataattcatgccatagtgtg
cacttacgagaagttaactccgcacttggagatcagccgataaatgacaa
ggtcaaacaatgggatgaagacaaggaccagaaagggatttagcacctgc
aacaccatggtaacaaggatcagtacaagtgtccctctgtcctgaatgag
ctcatgctctcctctgacagcatgctctctctcatgtctcctcacattca
cctgagtaggtaaaagagtctgtatttctcagtctccttatacccaaggc
tctacttcccttgtaaaacatcttaacttacaaatacaccaaggaaatag
tcttcctgagcctgttttttttttcctgtcagtcaaactaggaatgtttt
tctccaatcaccccttttctttagtttcacagcctaaagggaacaatgag
ggcctaaataaatatccccaaaatcgccatcagtaagcagagcttctgac
tttgtcactcatacaacaacagtctgtactttgtttttgtttgttttggt
agtactgaggggtcagacttaggtaatcctgtgtgtcagacaagtgccta
gctgtgggcttgcactttccttgacaatatttccaatactatactatctt
gacatagaatagtcaatgctcacactttagccgtgagcttacactcagtc
tctctggagttgagcagaactacatcctttacaaaggatgtgaaagagag
gagtaagatcaaagaaactgctctcaacacgggcctcctcggcacatgaa
gatacatggaaggatggctattaacccaaatgctgctggagaagaacaaa
agaggtaaaatgggaaaccacatgtcatgcctacagagaaatctcctact
gcatctgattcggcttaagtacaaaaaatccctgaacatctatattaact
attagttagatagttagagaaagacaaggaaagcgaggcacc
gaattcagtacaagcctagtcctaacacacaatctctctgtgttaaaatg
gagtatctggaactatgagacaaaaccagtcattaataagctatggcaag
ttcatcaacctaagtagtattttttgagaggttctggtgttttctgttaa
gatgcgtatcatcactcgccatatactcaccacacttctaactcttccac
accctcctagtgtgacatccaactgccatgctttcatctaccaagctctg
aaagtgactgctgggactgacgtgccacatttaacactctggatctcatg
aatctagtgaaggtgccaccgtcctacctgggcagcttgctctgcctgtg
tctggctgagctgtgtttgcaaagtgctgatgagttcttccttttcttgg
agctgctgcttcatcaggacaaagtcttccatctctgcagaactcttatc
caactgaaagggggaatattcacttaagcaaagcacttggatgtcttatt
tgtttgactttctcatctatcttgaatacctaccctactcccttctaatt
tatactttgcgacaaaaaagaattccacatgctaatttttaaaatattat
tgaattcctaaaatttgtcagaagaagacagaagcaatagcaacagtgat
ttcagtatctttgaatggtcacataggaaagagacagaccaactagacag
cgaacataaaaacgtgggcaatgttgacaacaaaagcaggaaagtaggga
gatgctctataaacaagttgagagcaactatggaaatctgagtttgcttg
gcattagagactgtatgagagaaaggggacagtgacagagctacatctga
tggcctcgggaacaggaaaaatccaaagcagcaaacaaatatttgttgga
acccacagcagccagtatcagagagcagcagcactcttgggccagggcta
atgcaggacttctagaggaagaatatgaagagtgtgggggctaatcttag
gccttctgatatctcagcctggagccacaggcgctactgttagaagaccg
atatgaaatacacttagaaaactctggtgaggaatgacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_36759155_36760251
seq2: B6Ng01-113K15.b_48_1139

seq1  GAATTCTGTCAAACATGGAGAAATAGAAACAGGTGAATGCTACATCAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCAAACATGGAGAAATAGAAACAGGTGAATGCTACATCAGAA  50

seq1  GGAATAACCATTCTGTAGAAACATCCCAGCTCTGAGTTGTCGCCAAGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAACCATTCTGTAGAAACATCCCAGCTCTGAGTTGTCGCCAAGCTG  100

seq1  GGCAAACTGAGTATGTAAACTTGGTACGTAATAATTCATGCCATAGTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAACTGAGTATGTAAACTTGGTACGTAATAATTCATGCCATAGTGTG  150

seq1  CACTTACGAGAAGTTAACTCCGCACTTGGAGATCAGCCGATAAATGACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTACGAGAAGTTAACTCCGCACTTGGAGATCAGCCGATAAATGACAA  200

seq1  GGTCAAACAATGGGATGAAGACAAGGACCAGAAAGGGATTTAGCACCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAAACAATGGGATGAAGACAAGGACCAGAAAGGGATTTAGCACCTGC  250

seq1  AACACCATGGTAACAAGGATCAGTACAAGTGTCCCTCTGTCCTGAATGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCATGGTAACAAGGATCAGTACAAGTGTCCCTCTGTCCTGAATGAG  300

seq1  CTCATGCTCTCCTCTGACAGCATGCTCTCTCTCATGTCTCCTCACATTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGCTCTCCTCTGACAGCATGCTCTCTCTCATGTCTCCTCACATTCA  350

seq1  CCTGAGTAGGTAAAAGAGTCTGTATTTCTCAGTCTCCTTATACCCAAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGTAGGTAAAAGAGTCTGTATTTCTCAGTCTCCTTATACCCAAGGC  400

seq1  TCTACTTCCCTTGTAAAACATCTTAACTTACAAATACACCAAGGAAATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTTCCCTTGTAAAACATCTTAACTTACAAATACACCAAGGAAATAG  450

seq1  TCTTCCTGAGCCTGTTTTTTTTTTCCTGTCAGTCAAACTAGGAATGTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTGAGCCTGTTTTTTTTTTCCTGTCAGTCAAACTAGGAATGTTTT  500

seq1  TCTCCAATCACCCCTTTTCTTTAGTTTCACAGCCTAAAGGGAACAATGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAATCACCCCTTTTCTTTAGTTTCACAGCCTAAAGGGAACAATGAG  550

seq1  GGCCTAAATAAATATCCCCAAAATCGCCATCAGTAAGCAGAGCTTCTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTAAATAAATATCCCCAAAATCGCCATCAGTAAGCAGAGCTTCTGAC  600

seq1  TTTGTCACTCATACAACAACAGTCTGTACTTTGTTTTTGTTTGTTTTGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCACTCATACAACAACAGTCTGTACTTTGTTTTTGTTTGTTTTGGT  650

seq1  AGTACTGAGGGGTCAGACTTAGGTAATCCTGTGTGTCAGACAAGTGCCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTGAGGGGTCAGACTTAGGTAATCCTGTGTGTCAGACAAGTGCCTA  700

seq1  GCTGTGGGCTTGCACTTTCCTTGACAATATTTCCAATACTATACTATCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGGGCTTGCACTTTCCTTGACAATATTTCCAATACTATACTATCTT  750

seq1  GACATAGAATAGTCAATGCTCACACTTTAGCCGTGAGCTTACACTCAGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAGAATAGTCAATGCTCACACTTTAGCCGTGAGCTTACACTCAGTC  800

seq1  TCTCTGGAGTTGAGCAGAACTACATCCTTTACAAAGGATGTGAAAGAGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGAGTTGAGCAGAACTACATCCTTTACAAAGGATGTGAAAGAGAG  850

seq1  GAGTAAGATCAAAGAAACTGCTCTCAACACGGGCCTCCTCGGCACATGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAGATCAAAGAAACTGCTCTCAACACGGGCCTCCTCGGCACATGAA  900

seq1  GAATACATGGAAGGATGGCTATTAACCCAAATGCTGCTGGAGAAGAACAA  950
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  G-ATACATGGAAGGATGGCTATTAACCCAAATGCTGCTGGAGAAGAACAA  949

seq1  AAGAGGTAAAAAGGGGAAACCACATGTCAATGCCTACAGAGAAATCTCCT  1000
      ||||||| |||| ||||||||||||||| |||||||||||||||||||||
seq2  AAGAGGT-AAAATGGGAAACCACATGTC-ATGCCTACAGAGAAATCTCCT  997

seq1  ACCTGCATCTGATCCGGCTGAAGTACAAAAAATCCCTGAAACATCATAAT  1050
      | ||||||||||| ||||| |||||||||||||||||| ||||||   ||
seq2  A-CTGCATCTGATTCGGCTTAAGTACAAAAAATCCCTG-AACATCTATAT  1045

seq1  AAACTA-TAGTTAGATAG-TAGCAGAAGACAAGGAAAGCCGAGGGCACC  1097
       ||||| ||||||||||| |||   ||||||||||||| ||| ||||||
seq2  TAACTATTAGTTAGATAGTTAGAGAAAGACAAGGAAAG-CGA-GGCACC  1092

seq1: chr16_36890814_36891905
seq2: B6Ng01-113K15.g_72_1161 (reverse)

seq1  ATGTCACTCCTCACAAG-TTTTTCTAAGTGTATTTCAATATCTGTC-TCT  48
      |||||| ||||||| ||  ||||||||||||||||| ||||| ||| |||
seq2  ATGTCATTCCTCACCAGAGTTTTCTAAGTGTATTTC-ATATCGGTCTTCT  49

seq1  AACAGTAGCGCCTGTGGCT-CAGGCTTGAGATATCAGAGGGCCT-AGATT  96
      ||||||||||||||||||| ||||| |||||||||||| ||||| |||||
seq2  AACAGTAGCGCCTGTGGCTCCAGGC-TGAGATATCAGAAGGCCTAAGATT  98

seq1  AG-CCCCACCCTCTTCATATTTCTTCCTCTAGAAGTCCTGCATTTAGCCA  145
      || |||||| ||||||||| |||||||||||||||||||||| |||||| 
seq2  AGCCCCCACACTCTTCATA-TTCTTCCTCTAGAAGTCCTGCA-TTAGCCC  146

seq1  TGGCCAAAGAAGTGCTGCTGCTCTTCTGATACTGGCTGCTGTGGGTTCCA  195
      ||||| ||| ||||||||||||| ||||||||||||||||||||||||||
seq2  TGGCCCAAG-AGTGCTGCTGCTC-TCTGATACTGGCTGCTGTGGGTTCCA  194

seq1  ACAAATATTTGTTTGCTGCTTTGGATTTTTCCTGTTCCCGAGGCCATCAG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATATTTGTTTGCTGCTTTGGATTTTTCCTGTTCCCGAGGCCATCAG  244

seq1  ATGTAGCTCTGTCACTGTCCCCTTTCTCTCATACAGTCTCTAATGCCAAG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGCTCTGTCACTGTCCCCTTTCTCTCATACAGTCTCTAATGCCAAG  294

seq1  CAAACTCAGATTTCCATAGTTTGCTCTCAACTTGTTTATAGAGCATCTCC  345
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CAAACTCAGATTTCCATAG-TTGCTCTCAACTTGTTTATAGAGCATCTCC  343

seq1  CTACTTTCCTGCTTTTGTTGTCAACATTGCCCACGTTTTTATGTTCGCTG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTCCTGCTTTTGTTGTCAACATTGCCCACGTTTTTATGTTCGCTG  393

seq1  TCTAGTTGGTCTGTCTCTTTCCTATGTGACCATTCAAAGATACTGAAATC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTTGGTCTGTCTCTTTCCTATGTGACCATTCAAAGATACTGAAATC  443

seq1  ACTGTTGCTATTGCTTCTGTCTTCTTCTGACAAATTTTAGGAATTCAATA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTGCTATTGCTTCTGTCTTCTTCTGACAAATTTTAGGAATTCAATA  493

seq1  ATATTTTAAAAATTAGCATGTGGAATTCTTTTTTGTCGCAAAGTATAAAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTAAAAATTAGCATGTGGAATTCTTTTTTGTCGCAAAGTATAAAT  543

seq1  TAGAAGGGAGTAGGGTAGGTATTCAAGATAGATGAGAAAGTCAAACAAAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGGGAGTAGGGTAGGTATTCAAGATAGATGAGAAAGTCAAACAAAT  593

seq1  AAGACATCCAAGTGCTTTGCTTAAGTGAATATTCCCCCTTTCAGTTGGAT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATCCAAGTGCTTTGCTTAAGTGAATATTCCCCCTTTCAGTTGGAT  643

seq1  AAGAGTTCTGCAGAGATGGAAGACTTTGTCCTGATGAAGCAGCAGCTCCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTTCTGCAGAGATGGAAGACTTTGTCCTGATGAAGCAGCAGCTCCA  693

seq1  AGAAAAGGAAGAACTCATCAGCACTTTGCAAACACAGCTCAGCCAGACAC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGGAAGAACTCATCAGCACTTTGCAAACACAGCTCAGCCAGACAC  743

seq1  AGGCAGAGCAAGCTGCCCAGGTAGGACGGTGGCACCTTCACTAGATTCAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAGCAAGCTGCCCAGGTAGGACGGTGGCACCTTCACTAGATTCAT  793

seq1  GAGATCCAGAGTGTTAAATGTGGCACGTCAGTCCCAGCAGTCACTTTCAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCCAGAGTGTTAAATGTGGCACGTCAGTCCCAGCAGTCACTTTCAG  843

seq1  AGCTTGGTAGATGAAAGCATGGCAGTTGGATGTCACACTAGGAGGGTGTG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGGTAGATGAAAGCATGGCAGTTGGATGTCACACTAGGAGGGTGTG  893

seq1  GAAGAGTTAGAAGTGTGGTGAGTATATGGCGAGTGATGATACGCATCTTA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGTTAGAAGTGTGGTGAGTATATGGCGAGTGATGATACGCATCTTA  943

seq1  ACAGAAAACACCAGAACCTCTCAAAAAATACTACTTAGGTTGATGAACTT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAACACCAGAACCTCTCAAAAAATACTACTTAGGTTGATGAACTT  993

seq1  GCCATAGCTTATTAATGACTGGTTTTGTCTCATAGTTCCAGATACTCCAT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATAGCTTATTAATGACTGGTTTTGTCTCATAGTTCCAGATACTCCAT  1043

seq1  TTTAACACAGAGAGATTGTGTGTTAGGACTAGGCTTGTACTGAATTC  1092
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACACAGAGAGATTGTGTGTTAGGACTAGGCTTGTACTGAATTC  1090