BAC Information

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BAC

Clone NameB6Ng01-113L19
Chromosome16 (Build37)
Map Location 69,480,521 - 69,481,621
singlet/doubletsinglet
Overlap genenone
Upstream geneEG626609
Downstream geneSpeer2, EG664930, Gbe1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113L19.bB6Ng01-113L19.g
ACCDH919454DH919455
length1,2261,104
definitionDH919454|Mus musculus domesticus DNA, BAC clone: B6Ng01-113L19, 5' end.DH919455|Mus musculus domesticus DNA, BAC clone: B6Ng01-113L19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaagagttctgacacactgagaatcttgggattacaggatccca
gaatcataggatcacagagacatctggactctgaggatttctgacacaac
caggatgtcagaagggacaggctccagtcagagacagagtgggcaggcag
cactaaagttaaccagttggtgagagacaagcataagaacataagaaaca
gaaaccaagcttacttggcatcatcaaaaccaagttctcccaccatagca
actcctggatataccatcacaccagaaaagcaagattcaaatttacaatt
tctttctatgaaaatgatgatagagaactttaagaaggatatcaacaact
cccttaaagaaatacggaagaaaatgcaaatcaaaacaaccctgagattc
cacctcacaccaatcagaatggctaagatcaaaaattcaggtgacagcag
atgctggcgtggatgtggagaaagaggaacactcctccattgttggtggg
attgcaggcttgtacaaccactctggaaatcagtctggcggttcctcagg
aaattggacatagtactaccggaggatccagcaatacctctcctgggcat
atatccagaagatgccccaactggtaagaaggacacatgttccactatgt
tcatagcagccttatttataatagccagaagctggaaagaacccagatgc
ccctcaacagaggaatggatacagaaaatgtggtacatctacacaatgga
gtactactcagctattaaaaagaatgaatttatgaaattcctagccaaat
ggatggacctggagggcatcatccttgagtgaggtaacacattcacaaag
gaactcacacaatatgtactcactgataagtggatattagctcaaaacct
aggaaacccaggatataagatacaatttcctaaacaatgaaactcaagaa
aaatgaagactgaagtgtggacactattgcccctcctttagaagtggaac
aaaacaaccctggaaggagttacggagacaaagtttggagcttgagatga
aaggattggtccatgtaagagaacttcattatccaggatccaccccataa
ttagcattcaaacacttgacaccatttgcctaacctagccagattttatt
ggaaggaacctgaagtatgctgtcttctgtgtagactatatgtccgtggg
tcctaacacacagtagtggaatgtct
gaattccatagggcgttttctaatatgatgatgatgatgacaatttgaag
gaacttttgatactcttccttgatgcttttatccctttcctgttcttgtc
tttttggtgtttctatgcctgaacaggttttttgtttgttttgttttgtt
ttgttttgttttgttttgtttttagagaggaacattagtaggagcatagc
aagatgatgtcatagcctcaggacacagaaatttatagcgtgccaagatt
ttttttatttttattttttaaaggaagatgaatgttttcacacatgattg
gaaatctgagagctgaggataaaatggatgactttacaaatctgttacag
tgaggttgtttgcatatgtagatgtggacagtgctctcctgagatatttt
agtacatggtggtctactagagaatctgtactgcattagagaatgatatg
aaatattataattccatcagacaaaagaaatatgccatgtatttttgaga
ccctggatttttattccagggagactttaaaggtcatgccacatgggaaa
atatataaatatacaatatatatatttaagtgaaagtgtttggggacatt
ttaaataatgtacagctttataaaatattggcaatattagcatattttac
tgtgatgattttattttcactatgtaagagtgttctttttttgtcaccaa
tataaatattttgaataatatttgcggttcctgcttggtacattaatctc
aaatgattgaagaagtaaggtgtcttcattatatagtttgtaatctttaa
aattatttaaaacattaccatagagaataaacatctgctttactattggg
gatgcttttttcttagaaatgctattatttttatgagtttatttttgctt
cgatcagataataagcaaaacttcctttaaaatttaatagattccttaga
cttattttttaaagggaactcaaatattaagttacatgaaaggaatacca
tgaattcaagggttaatctcaaattctccttagttttctgtctctaattc
tgagtaaaccattgttgacacaaaggggcctggcttgaatattgaaaata
taca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_69480521_69481621
seq2: B6Ng01-113L19.g_68_1171 (reverse)

seq1  TGTATA-TTTCTATATTCTAG-CAGGCACCTTCTGTGTCACCAATGGTTT  48
      |||||| |||| |||||| || ||||| |||| ||||||| |||||||||
seq2  TGTATATTTTCAATATTCAAGCCAGGCCCCTT-TGTGTCAACAATGGTTT  49

seq1  ACTCAGAAATAAAGAACAAAGAATAAATAAAGAGAAATTGAGATTAACCA  98
      |||||||| || ||   | |||| || ||| ||||| |||||||||||| 
seq2  ACTCAGAATTAGAG---ACAGAA-AACTAAGGAGAATTTGAGATTAACCC  95

seq1  TTGAATTCATGTATTTCCTTTCATGT-ACTTAATATTTGAGTT-CCTTTA  146
      |||||||||||   |||||||||||| |||||||||||||||| ||||||
seq2  TTGAATTCATGGTATTCCTTTCATGTAACTTAATATTTGAGTTCCCTTTA  145

seq1  AAAAATAAGTCTAAGGAATCTTATTACATTTTAAAGG-AGTTTTGCTTAT  195
      |||||||||||||||||||| ||||| |||||||||| ||||||||||| 
seq2  AAAAATAAGTCTAAGGAATC-TATTAAATTTTAAAGGAAGTTTTGCTTA-  193

seq1  TTATCTTGATCGAAGC-AAAATAAACTCATAAAAATAATAGCATTTCTAA  244
      ||||| |||||||||| |||||||||||||||||||||||||||||||||
seq2  TTATC-TGATCGAAGCAAAAATAAACTCATAAAAATAATAGCATTTCTAA  242

seq1  GAAAAAAGCAT-CCCAATAGTAAAGCAGATGTTTATTCTCTATGGTTATG  293
      ||||||||||| |||||||||||||||||||||||||||||||||| |||
seq2  GAAAAAAGCATCCCCAATAGTAAAGCAGATGTTTATTCTCTATGGTAATG  292

seq1  TTTTAAATAATTTTAAAGATTACAAACTATATAATGAAGACACCTTACTT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATAATTTTAAAGATTACAAACTATATAATGAAGACACCTTACTT  342

seq1  CTTCAATCATTTGAGATTAATGTACCAAGCAGGAACCGC-AATATTATTC  392
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTTCAATCATTTGAGATTAATGTACCAAGCAGGAACCGCAAATATTATTC  392

seq1  AAAATATTTATATTGGTGAC--AAAAAGAACACTCTTACATAGTGAAAAT  440
      ||||||||||||||||||||  ||||||||||||||||||||||||||||
seq2  AAAATATTTATATTGGTGACAAAAAAAGAACACTCTTACATAGTGAAAAT  442

seq1  AAAATCATCACAGT-AAATATGCTAATATTGCCAATATTTTATAAAGCTG  489
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AAAATCATCACAGTAAAATATGCTAATATTGCCAATATTTTATAAAGCTG  492

seq1  TACATTATTTAAAATGTCCCCAAACACTTTCACTTAAATATATATATTGT  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTATTTAAAATGTCCCCAAACACTTTCACTTAAATATATATATTGT  542

seq1  ATATTTATATATTTTCCCATGTGGCATGACCTTTAAAGTCTCCCTGGAAT  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATATATTTTCCCATGTGGCATGACCTTTAAAGTCTCCCTGGAAT  592

seq1  AAAAATCCAGGGTCTCAAAAATACATGGCATATTTCTTTTGTCTGATGGA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCCAGGGTCTCAAAAATACATGGCATATTTCTTTTGTCTGATGGA  642

seq1  ATTATAATATTTCATATCATTCTCTAATGCAGTACAGATTCTCTAGTAGA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAATATTTCATATCATTCTCTAATGCAGTACAGATTCTCTAGTAGA  692

seq1  CCACCATGTACTAAAATATCTCAGGAGAGCACTGTCCACATCTACATATG  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCATGTACTAAAATATCTCAGGAGAGCACTGTCCACATCTACATATG  742

seq1  CAAACAACCTCACTGTAACAGATTTGTAAAGTCATCCATTTTATCCTCAG  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAACCTCACTGTAACAGATTTGTAAAGTCATCCATTTTATCCTCAG  792

seq1  CTCTCAGATTTCCAATCATGTGTGAAAACATTCATCTTCCTTTAAAAAAT  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAGATTTCCAATCATGTGTGAAAACATTCATCTTCCTTTAAAAAAT  842

seq1  AAAAATAAAAAAAATCTTGGCACGCTATAAATTTCTGTGTCCTGAGGCTA  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAAAAAAATCTTGGCACGCTATAAATTTCTGTGTCCTGAGGCTA  892

seq1  TGACATCATCTTGCTATGCTCCTACTAATGTTCCTCTCTAAAAACAAAAC  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATCATCTTGCTATGCTCCTACTAATGTTCCTCTCTAAAAACAAAAC  942

seq1  AAAACAAAACAAAACAAAACAAAACAAACAAAAAACCTGTTCAGGCATAG  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAACAAAACAAAACAAAACAAACAAAAAACCTGTTCAGGCATAG  992

seq1  AAACACCAAAAAGACAAGAACAGGAAAGGGATAAAAGCATCAAGGAAGAG  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACCAAAAAGACAAGAACAGGAAAGGGATAAAAGCATCAAGGAAGAG  1042

seq1  TATCAAAAGTTCCTTCAAATTGTCATCATCATCATCATATTAGAAAACGC  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAAAGTTCCTTCAAATTGTCATCATCATCATCATATTAGAAAACGC  1092

seq1  CCTATGGAATTC  1101
      ||||||||||||
seq2  CCTATGGAATTC  1104