BAC Information

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BAC

Clone NameB6Ng01-115F03
Chromosome16 (Build37)
Map Location 92,631,209 - 92,779,252
singlet/doubletdoublet
Overlap geneRunx1
Upstream geneGart, Son, Donson, Cryzl1, LOC100040653, Itsn1, Atp5o, Mrps6, Slc5a3, Kcne2, 1190017O12Rik, 4930563D23Rik, Kcne1, Dscr1, 2410124H12Rik, Clic6
Downstream geneEG666023, LOC100040747, Setd4, LOC670912, Cbr1, EG435489, Cbr3, Dopey2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115F03.bB6Ng01-115F03.g
ACCDH920615DH920616
length1,171936
definitionDH920615|Mus musculus domesticus DNA, BAC clone: B6Ng01-115F03, 5' end.DH920616|Mus musculus domesticus DNA, BAC clone: B6Ng01-115F03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,778,059 - 92,779,252)(92,631,209 - 92,632,144)
sequence
gaattccagtcaagtcatgaccagtagttcctggagcacactgggaaact
cctgccagagcagaagaaggggccagcaaaaatcatctcatcccatctca
acggaatccaaaccctggtctgtgacttcagggccacccctgaatctagt
ggtgctccttggggctctgcctcatggaccaagcccatccacagcacagc
accttccaggccccgccaagaaaccttgttcatttgttacttgtttgttt
gaccttttctttgtgatgggtttaacggaattcccttctatgccgaaaat
cttaagcagctctctgttcattctttgttactgcctttgttaagataaac
tcagtctccctcctgtcctccttctccccctccctccctttcttcttcct
ttttggttttatgtgaatttttgttaatgatgtcagacttcaaaggaagt
gttccagccatttctatcccaacagacttgggcctggaattcggtctctg
tcttggtgaaagcactatgttgctaacacgtgtctcacctccggttgact
ctggcctctgtctcccctctgtcacacagcaaagcctcttcactttctct
cgccctgaattactgtcaggaatcagcagctgtccctgtgccagaccctg
agccccagtgacttcattcttccctgctgtcccaacactaatctccctgc
tccctgcctgtgtcagcaccttgagcccctggcatgcctggctttcctca
gccattgcccaaatgattctcttctcgctctgtctgtccccgaaagcccg
gccacaaggtggatgaagccagagctaattgaatctttgggtgatgattc
acagaagtaagcctgactgtctgaccaaaaaaccacacagtggggagttt
agaagccagcagtcaaaacagccttctgggtcagccattgattgaagttc
aaaggaacacagatggaagtcagtaatgacgaggtgggcccgggaaacac
acttacctgggcatgaagcctcgtgggtgagcttcccaggcctttaaatc
atgctagtgcactgggactgcttcagacagtgtgtcactgggtgggctac
tgctagtaggaaaaactggtggcaggtctcatgcttaaagatccaccaca
atagggtggtgaaataacaga
gaattcaagcattggctgacctaggacttccctagtcttgccttggcttc
ttcagtttcccctcctcccgactcctcccccaagttctgaaggctggaga
tgcctctaacaaggccctcattgtcccagacaggtgtgagattggacttg
atccctggccaacacctccagcaccagaaccagccctgtaagctgcaaac
acgcaccagccctccagtaatgcctctgcagccagccagagactcaacaa
tttaaggcttaacacgcacagcataaatcaagggaggatggaccagccga
ccggcagcttcttgggcaggtgcctgcagactgtctgcagatcagaccct
gcctgtttgggttatttgagactgagacacacacacacacacacacacac
acacacacacacacacacacacacgtataaaatataaggatgagaaattg
ggtggagccctgtgcacaggcacacctgggtctgccctatcttgtcccaa
cagcccctcgttcgcctggatggtgtttggaagggactcctcaggaaggc
tccctgtgctacttccaaataccaggaatgtgtccagcgaccgaaccgga
gaagacagccaagcactcggctaacagtgtatgccacctgtggcaagtca
ctttcccctccaggctgccattgctcctctgggatctggggagggggggc
gggatccttttacgttttcccagaatgcccttcattgctctagccttatc
ttctttagagacttgtgtttctcagacagtggaggaggcaagcccagagt
gcaagtcccctgggagttcgggtcatgacttgtcaagagcacactccgtg
ggtggagaaggtggagaatgacaaccagcggtatggctatttaattgaag
ggagtcaagtcccctttcttttttgaaaccagttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_92778059_92779252
seq2: B6Ng01-115F03.b_46_1216 (reverse)

seq1  TCTGTTATTTTCACACACCCTATTGTGGT-GATCTGTTACAGCCATGGAG  49
      ||||||| |||||| |||||||||||||| ||||| ||| || ||||   
seq2  TCTGTTA-TTTCAC-CACCCTATTGTGGTGGATCT-TTA-AG-CATG--A  43

seq1  GACCTGGCCACCCAGTTTTTCCCTACCTAGCCAGTAAGCCCCACCCAGTG  99
      ||||| |||| ||||||||| |||| |||| |||||   |||||||||||
seq2  GACCT-GCCA-CCAGTTTTT-CCTA-CTAG-CAGTA--GCCCACCCAGTG  86

seq1  GACCACACTGTCCTTGAAGCCAGTCCCAGTGCAACTAGCATGATTTAAAG  149
         |||||||||  ||||| |||||||||||| |||||||||||||||||
seq2  --ACACACTGTC--TGAAG-CAGTCCCAGTGC-ACTAGCATGATTTAAAG  130

seq1  GCCTGGGAAGCCTCACCCACGAGGCTTCATGCCCAGGTAAGTGTGTTTCC  199
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGGAAG-CTCACCCACGAGGCTTCATGCCCAGGTAAGTGTGTTTCC  179

seq1  CGGGCCCACCCTCGTCATTACTGACTTCCATCTGTGTTCCTTTGAACTTC  249
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CGGGCCCA-CCTCGTCATTACTGACTTCCATCTGTGTTCCTTTGAACTTC  228

seq1  AATCAATGGCTGAACCCAGAAGGCTGTTTTGACTGCTGGCTTCTAAACTC  299
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AATCAATGGCTG-ACCCAGAAGGCTGTTTTGACTGCTGGCTTCTAAACTC  277

seq1  CCCACTGTGTGGTTTTTTGGGTCAGACAGTCAGGCTTACTTCTGTGAATC  349
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCCACTGTGTGGTTTTTT-GGTCAGACAGTCAGGCTTACTTCTGTGAATC  326

seq1  ATCACCCAAAGATTCAATTAGCTCTGGCTTCATCCACCTTGTGGCCGGGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCCAAAGATTCAATTAGCTCTGGCTTCATCCACCTTGTGGCCGGGC  376

seq1  CTTCGGGGACAGACAGAGCGAGAAGAGAATCATTTGGGCAATGGCTGAGG  449
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGGGGACAGACAGAGCGAGAAGAGAATCATTTGGGCAATGGCTGAGG  426

seq1  AAAGCCAGGCATGCCAGGGGCTCAAGGTGCTGACACAGGCAGGGAGCAGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCAGGCATGCCAGGGGCTCAAGGTGCTGACACAGGCAGGGAGCAGG  476

seq1  GAGATTAGTGTTGGGACAGCAGGGAAGAATGAAGTCACTGGGGCTCAGGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTAGTGTTGGGACAGCAGGGAAGAATGAAGTCACTGGGGCTCAGGG  526

seq1  TCTGGCACAGGGACAGCTGCTGATTCCTGACAGTAATTCAGGGCGAGAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCACAGGGACAGCTGCTGATTCCTGACAGTAATTCAGGGCGAGAGA  576

seq1  AAGTGAAGAGGCTTTGCTGTGTGACAGAGGGGAGACAGAGGCCAGAGTCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAAGAGGCTTTGCTGTGTGACAGAGGGGAGACAGAGGCCAGAGTCA  626

seq1  ACCGGAGGTGAGACACGTGTTAGCAACATAGTGCTTTCACCAAGACAGAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGGAGGTGAGACACGTGTTAGCAACATAGTGCTTTCACCAAGACAGAG  676

seq1  ACCGAATTCCAGGCCCAAGTCTGTTGGGATAGAAATGGCTGGAACACTTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGAATTCCAGGCCCAAGTCTGTTGGGATAGAAATGGCTGGAACACTTC  726

seq1  CTTTGAAGTCTGACATCATTAACAAAAATTCACATAAAACCAAAAAGGAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAGTCTGACATCATTAACAAAAATTCACATAAAACCAAAAAGGAA  776

seq1  GAAGAAAGGGAGGGAGGGGGAGAAGGAGGACAGGAGGGAGACTGAGTTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAGGGAGGGAGGGGGAGAAGGAGGACAGGAGGGAGACTGAGTTTA  826

seq1  TCTTAACAAAGGCAGTAACAAAGAATGAACAGAGAGCTGCTTAAGATTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAACAAAGGCAGTAACAAAGAATGAACAGAGAGCTGCTTAAGATTTT  876

seq1  CGGCATAGAAGGGAATTCCGTTAAACCCATCACAAAGAAAAGGTCAAACA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCATAGAAGGGAATTCCGTTAAACCCATCACAAAGAAAAGGTCAAACA  926

seq1  AACAAGTAACAAATGAACAAGGTTTCTTGGCGGGGCCTGGAAGGTGCTGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGTAACAAATGAACAAGGTTTCTTGGCGGGGCCTGGAAGGTGCTGT  976

seq1  GCTGTGGATGGGCTTGGTCCATGAGGCAGAGCCCCAAGGAGCACCACTAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGGATGGGCTTGGTCCATGAGGCAGAGCCCCAAGGAGCACCACTAG  1026

seq1  ATTCAGGGGTGGCCCTGAAGTCACAGACCAGGGTTTGGATTCCGTTGAGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGGGGTGGCCCTGAAGTCACAGACCAGGGTTTGGATTCCGTTGAGA  1076

seq1  TGGGATGAGATGATTTTTGCTGGCCCCTTCTTCTGCTCTGGCAGGAGTTT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATGAGATGATTTTTGCTGGCCCCTTCTTCTGCTCTGGCAGGAGTTT  1126

seq1  CCCAGTGTGCTCCAGGAACTACTGGTCATGACTTGACTGGAATTC  1194
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGTGCTCCAGGAACTACTGGTCATGACTTGACTGGAATTC  1171

seq1: chr16_92631209_92632144
seq2: B6Ng01-115F03.g_67_1002

seq1  GAATTCAAGCATTGGCTGACCTAGGACTTCCCTAGTCTTGCCTTGGCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGCATTGGCTGACCTAGGACTTCCCTAGTCTTGCCTTGGCTTC  50

seq1  TTCAGTTTCCCCTCCTCCCGACTCCTCCCCCAAGTTCTGAAGGCTGGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTTCCCCTCCTCCCGACTCCTCCCCCAAGTTCTGAAGGCTGGAGA  100

seq1  TGCCTCTAACAAGGCCCTCATTGTCCCAGACAGGTGTGAGATTGGACTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTAACAAGGCCCTCATTGTCCCAGACAGGTGTGAGATTGGACTTG  150

seq1  ATCCCTGGCCAACACCTCCAGCACCAGAACCAGCCCTGTAAGCTGCAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTGGCCAACACCTCCAGCACCAGAACCAGCCCTGTAAGCTGCAAAC  200

seq1  ACGCACCAGCCCTCCAGTAATGCCTCTGCAGCCAGCCAGAGACTCAACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCACCAGCCCTCCAGTAATGCCTCTGCAGCCAGCCAGAGACTCAACAA  250

seq1  TTTAAGGCTTAACACGCACAGCATAAATCAAGGGAGGATGGACCAGCCGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGGCTTAACACGCACAGCATAAATCAAGGGAGGATGGACCAGCCGA  300

seq1  CCGGCAGCTTCTTGGGCAGGTGCCTGCAGACTGTCTGCAGATCAGACCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGCAGCTTCTTGGGCAGGTGCCTGCAGACTGTCTGCAGATCAGACCCT  350

seq1  GCCTGTTTGGGTTATTTGAGACTGAGACACACACACACACACACACACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTTTGGGTTATTTGAGACTGAGACACACACACACACACACACACAC  400

seq1  ACACACACACACACACACACACACGTATAAAATATAAGGATGAGAAATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACGTATAAAATATAAGGATGAGAAATTG  450

seq1  GGTGGAGCCCTGTGCACAGGCACACCTGGGTCTGCCCTATCTTGTCCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAGCCCTGTGCACAGGCACACCTGGGTCTGCCCTATCTTGTCCCAA  500

seq1  CAGCCCCTCGTTCGCCTGGATGGTGTTTGGAAGGGACTCCTCAGGAAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCCTCGTTCGCCTGGATGGTGTTTGGAAGGGACTCCTCAGGAAGGC  550

seq1  TCCCTGTGCTACTTCCAAATACCAGGAATGTGTCCAGCGACCGAACCGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGTGCTACTTCCAAATACCAGGAATGTGTCCAGCGACCGAACCGGA  600

seq1  GAAGACAGCCAAGCACTCGGCTAACAGTGTATGCCACCTGTGGCAAGTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACAGCCAAGCACTCGGCTAACAGTGTATGCCACCTGTGGCAAGTCA  650

seq1  CTTTCCCCTCCAGGCTGCCATTGCTCCTCTGGGATCTGGGGAGGGGGGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCCTCCAGGCTGCCATTGCTCCTCTGGGATCTGGGGAGGGGGGGC  700

seq1  GGGATCC-TTTACGTTTTCCCAGAATGCCCTTCATTGCTCTAGCCTTATC  749
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCCTTTTACGTTTTCCCAGAATGCCCTTCATTGCTCTAGCCTTATC  750

seq1  TTCTTTAGAGACTTGTGTTTCTCAGACAGTGGAGGAGGCAAGCCCAGAGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTAGAGACTTGTGTTTCTCAGACAGTGGAGGAGGCAAGCCCAGAGT  800

seq1  GCAAGTCCCCTGGGAGTTCGGGTCATGACTTGTCAAGAGCACACTCCGTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTCCCCTGGGAGTTCGGGTCATGACTTGTCAAGAGCACACTCCGTG  850

seq1  GGTGGTGAAGGTGGAG-ATGACAAGCCAGCCGGCAGGGCTAATT-AGTGA  897
      ||||| |||||||||| ||||||| |||| ||| | ||||| || | |||
seq2  GGTGGAGAAGGTGGAGAATGACAA-CCAG-CGGTATGGCTATTTAATTGA  898

seq1  AGGGAGTCAAGTCCCCATTCTCTTTTGAAACCCAGTTAA  936
      |||||||||||||||| |||| |||||||| ||||||||
seq2  AGGGAGTCAAGTCCCCTTTCTTTTTTGAAA-CCAGTTAA  936