BAC Information

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BAC

Clone NameB6Ng01-115N15
Chromosome2 (Build37)16 (Build37)
Map Location 21,150,860 - 21,150,94652,919,715 - 52,920,849
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC667609, Etl4, Arhgap21, LOC433408, LOC675912, C130046B21Rik, 4933434I06Rik, Thnsl1
Downstream geneGpr158, LOC637235
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115N15.bB6Ng01-115N15.g
ACCDH921010DH921011
length1,1461,127
definitionDH921010|Mus musculus domesticus DNA, BAC clone: B6Ng01-115N15, 5' end.DH921011|Mus musculus domesticus DNA, BAC clone: B6Ng01-115N15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(21,150,860 - 21,150,946)(52,919,715 - 52,920,849)
sequence
gaattcattgttttcaatagctgagtagtattccattgggtaaatgtacc
acattttatgtattaattcctctgtttagggacatctggattctttccag
cttctagctattataaataaggctgctaagaacatagtggagcatgtatc
cttattacttgttggagcatcttctgggtatatgcccaggaatggtatag
ctgggtcctcagataataatatgtccaattttttgaggaacccctaaaat
gatttccagagtggttgtaacaccttgcaatcccaccagcaatggaagag
tgttcctctttctccccatcctcaccagcatctgctctcacctgaggttt
tgatctcagccattctgactggtgtgaggtagaatctcagggttgttttg
attttcatttcctcaatgactaaggatgttgaacatttctttaggtgctt
ctcagccatttggtattcctcagttgagaattctttgtttagctctgtac
cccatttttaaaaagatttatttatttatttatttatttatttatttatt
tatttatttatttattataagtacactgtagctttcttcagacaccctag
aagagggcatcatatctcattatggatggttgtaagcgatcatgaactca
ggacctctggaagagcagtcagtgctcttgagccatctctccagtccctt
taccccatttttaaatagggttatttggttctctggagtctaacaaagaa
ctcaagttagattccaaagaactcagggttgttttaatttgcatttgcct
gatgactaaggacttgaacatttctttatgttattctcagccactgaaat
tccactgttatgacttctctgtttagttctaaaccccatattttttattg
ggtcgtttgtgttttttaatggttagcctcatgaattcttatatattttg
gatattacccctctatcagatgtgggattggtgaagacttttactcactc
tgtagttgtcaatttgtactactggtatatcctttgccttaaagaggctt
tccagtttatgaggtctcatttcattcttgatctaggtgttttcttattc
caataatcgtttcttcctttttaatggttattttattaatacattt
gaattcttatcatctatgcaaaggctgaacaccattttcaactgtatgtc
tactagtttgtttgcactgttaaccctttctcatgagtacaggtgaatgc
ctgttgtgtaaaatccattgtgttctcatcctttagtctagataagatgc
catcttggacaccatctgtctgcttcttttagatctcatatcattttgac
tatgaatatcctgataccttgagtcttcctatgatgtcctaccattccta
tcaccctctttttaaaaatgtcttttattggttattttatttctttacat
ttcaaatgttgtcacacttcctggatttccctctgaaaaccccctatcct
atccctccccctgcttccaagagggtgctcctccacccccaacccactcc
cacctaccttactgtcctggcattcccttattctggggcatcaagccctc
ttaaattaacagaagactgtagatttatgtttcattgggattagactcat
ctttatctttgaattgcaatctatcttgctttttccttccatttactgac
ttctttttttatattaaaaaatgttctgtttatcaaagtctacctccttc
atttattaaccattttggggctcatgtacaattgaacgcaagtatgtgtc
tacatatttgaagataagaggttgacactgggtctctttcttctcctaac
ccttccatgtctccccgtcctaaatacatggtttctttttcttatataaa
tacataaataaataacattatatatacatatgtttatataaaatgtatac
atacacacagataaaacctgcaaagttcatttcatgttaattacccatat
gacttttattactaagtatttgatattccataataatttaggggagacca
tcccatgggaagtctaaaatgtatccttctcttacagtttcattgcctgt
agatcttcatctgggtctaaggccccatgatattcacacatctgattggc
tggtcaactttcagcttattttttgaaactagtctcacactggaactgga
gctcagtgttttacttagaattactactagtagcaatctttcctcaattc
ctttcatggaattgctacactgacttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_21150860_21150946
seq2: B6Ng01-115N15.b_687_1190

seq1  TGAACTTAGGACCTCTGGAAGAGCAGTAAGTGCTCTTAACCGCTGAGCTA  50
      |||||| |||||||||||||||||||| ||||||||       ||||| |
seq2  TGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCT-------TGAGCCA  43

seq1  TCTCTCCAACCCC--CACTGGGTTTTTATTAATACATTT-----------  87
      ||||||||  |||   ||    ||||||  ||||   ||           
seq2  TCTCTCCAGTCCCTTTACCCCATTTTTA--AATAGGGTTATTTGGTTCTC  91

seq1  --------------------------------------------------  87
                                                        
seq2  TGGAGTCTAACAAAGAACTCAAGTTAGATTCCAAAGAACTCAGGGTTGTT  141

seq1  --------------------------------------------------  87
                                                        
seq2  TTAATTTGCATTTGCCTGATGACTAAGGACTTGAACATTTCTTTATGTTA  191

seq1  --------------------------------------------------  87
                                                        
seq2  TTCTCAGCCACTGAAATTCCACTGTTATGACTTCTCTGTTTAGTTCTAAA  241

seq1  --------------------------------------------------  87
                                                        
seq2  CCCCATATTTTTTATTGGGTCGTTTGTGTTTTTTAATGGTTAGCCTCATG  291

seq1  --------------------------------------------------  87
                                                        
seq2  AATTCTTATATATTTTGGATATTACCCCTCTATCAGATGTGGGATTGGTG  341

seq1  --------------------------------------------------  87
                                                        
seq2  AAGACTTTTACTCACTCTGTAGTTGTCAATTTGTACTACTGGTATATCCT  391

seq1  --------------------------------------------------  87
                                                        
seq2  TTGCCTTAAAGAGGCTTTCCAGTTTATGAGGTCTCATTTCATTCTTGATC  441

seq1  --------------------------------------------------  87
                                                        
seq2  TAGGTGTTTTCTTATTCCAATAATCGTTTCTTCCTTTTTAATGGTTATTT  491

seq1  -------------  87
                   
seq2  TATTAATACATTT  504

seq1: chr16_52919715_52920849
seq2: B6Ng01-115N15.g_68_1194

seq1  GAATTCTTATCATCTATGCAAAGGCTGAACACCATTTTCAACTGTATGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATCATCTATGCAAAGGCTGAACACCATTTTCAACTGTATGTC  50

seq1  TACTAGTTTGTTTGCACTGTTAACCCTTTCTCATGAGTACAGGTGAATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGTTTGTTTGCACTGTTAACCCTTTCTCATGAGTACAGGTGAATGC  100

seq1  CTGTTGTGTAAAATCCATTGTGTTCTCATCCTTTAGTCTAGATAAGATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGTGTAAAATCCATTGTGTTCTCATCCTTTAGTCTAGATAAGATGC  150

seq1  CATCTTGGACACCATCTGTCTGCTTCTTTTAGATCTCATATCATTTTGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGGACACCATCTGTCTGCTTCTTTTAGATCTCATATCATTTTGAC  200

seq1  TATGAATATCCTGATACCTTGAGTCTTCCTATGATGTCCTACCATTCCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATATCCTGATACCTTGAGTCTTCCTATGATGTCCTACCATTCCTA  250

seq1  TCACCCTCTTTTTAAAAATGTCTTTTATTGGTTATTTTATTTCTTTACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCTCTTTTTAAAAATGTCTTTTATTGGTTATTTTATTTCTTTACAT  300

seq1  TTCAAATGTTGTCACACTTCCTGGATTTCCCTCTGAAAACCCCCTATCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATGTTGTCACACTTCCTGGATTTCCCTCTGAAAACCCCCTATCCT  350

seq1  ATCCCTCCCCCTGCTTCCAAGAGGGTGCTCCTCCACCCCCAACCCACTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTCCCCCTGCTTCCAAGAGGGTGCTCCTCCACCCCCAACCCACTCC  400

seq1  CACCTACCTTACTGTCCTGGCATTCCCTTATTCTGGGGCATCAAGCCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTACCTTACTGTCCTGGCATTCCCTTATTCTGGGGCATCAAGCCCTC  450

seq1  TTAAATTAACAGAAGACTGTAGATTTATGTTTCATTGGGATTAGACTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTAACAGAAGACTGTAGATTTATGTTTCATTGGGATTAGACTCAT  500

seq1  CTTTATCTTTGAATTGCAATCTATCTTGCTTTTTCCTTCCATTTACTGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATCTTTGAATTGCAATCTATCTTGCTTTTTCCTTCCATTTACTGAC  550

seq1  TTCTTTTTTTATATTAAAAAATGTTCTGTTTATCAAAGTCTACCTCCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTTATATTAAAAAATGTTCTGTTTATCAAAGTCTACCTCCTTC  600

seq1  ATTTATTAACCATTTTGGGGCTCATGTACAATTGAACGCAAGTATGTGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTAACCATTTTGGGGCTCATGTACAATTGAACGCAAGTATGTGTC  650

seq1  TACATATTTGAAGATAAGAGGTTGACACTGGGTCTCTTTCTTCTCCTAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATTTGAAGATAAGAGGTTGACACTGGGTCTCTTTCTTCTCCTAAC  700

seq1  CCTTCCATGTCTCCCCGTCCTAAATACATGGTTTCTTTTTCTTATATAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCATGTCTCCCCGTCCTAAATACATGGTTTCTTTTTCTTATATAAA  750

seq1  TACATAAATAAATAACATTATATATACATATGTTTATATAAAATGTATAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAATAAATAACATTATATATACATATGTTTATATAAAATGTATAC  800

seq1  ATACACACAGATAAAACCTGCAAAGTTCATTTCATGTTAATTACCCATAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACACAGATAAAACCTGCAAAGTTCATTTCATGTTAATTACCCATAT  850

seq1  GACTTTTATTACTAAGTATTTGATATTCCATAATAATTTA-GGGAGACCA  899
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GACTTTTATTACTAAGTATTTGATATTCCATAATAATTTAGGGGAGACCA  900

seq1  TCCCATGGGAAGTCTAAAAATGTATCCTTCTCTTAACAGTTTCAATTGCC  949
      ||||||||||||||| |||||||||||||||||| |||||||| ||||||
seq2  TCCCATGGGAAGTCT-AAAATGTATCCTTCTCTT-ACAGTTTC-ATTGCC  947

seq1  TGTAGATCTTCATCTGGGTCTAAGGCCCCATGATATTTCACACATCTGAT  999
      ||||||||||||||||||||||||||||||||||| ||||||||||||| 
seq2  TGTAGATCTTCATCTGGGTCTAAGGCCCCATGATA-TTCACACATCTGA-  995

seq1  TTGGCTGGTCAACTTTCAGCTTATTTTTTGAGACTTAGTCTCACACTGAA  1049
      ||||||||||||||||||||||||||||||| || ||||||||||||| |
seq2  TTGGCTGGTCAACTTTCAGCTTATTTTTTGAAAC-TAGTCTCACACTGGA  1044

seq1  ACTGGAGCTCAGTGTTTTACTTAGAATAACTAACTAGTCAGCAATCTTTC  1099
      ||||||||||||||||||||||||||| ||| |||||| |||||||||||
seq2  ACTGGAGCTCAGTGTTTTACTTAGAATTACT-ACTAGT-AGCAATCTTTC  1092

seq1  CTCAA-TCCCTTCATGGACATTGCTACAACTGACTTT  1135
      ||||| ||| |||||||| |||||||| |||||||||
seq2  CTCAATTCCTTTCATGGA-ATTGCTAC-ACTGACTTT  1127