BAC Information

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BAC

Clone NameB6Ng01-116L19
Chromosome16 (Build37)
Map Location 58,637,348 - 58,638,302
singlet/doubletsinglet
Overlap geneE330017A01Rik
Upstream geneCol8a1, LOC435480, LOC629342, LOC100043477, Dcbld2, St3gal6, LOC100043480, Gm813
Downstream geneCpox, LOC100043790, Gpr15, Cldnd1, Olfr172, Olfr173, Olfr174, Olfr178, Olfr180, Olfr1563-ps1, Olfr181, Olfr182-ps1, Olfr183, Olfr185-ps1, Olfr186, Olfr187, Olfr188-ps1, Olfr189-ps1, Olfr190, Olfr191, Olfr192, Olfr193, Olfr1540-ps1, Olfr194, Olfr195, Olfr196, Olfr197, Olfr198, Olfr199, Olfr200-ps1, Olfr201, Olfr202, Olfr203, Olfr204, Olfr205, GA_x5J8B7U0478-6-340, Olfr206, Olfr207, Gabrr3, LOC100043803, Mina, BC043118, LOC672884, Arl6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116L19.b
ACCDH921661
length1,092
definitionDH921661|Mus musculus domesticus DNA, BAC clone: B6Ng01-116L19, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctctctgagggagtctgggccctttggggagtctgtgtaggtac
atctaaatggacatggtctctgaggaccttaaaggatggagggggatcct
gccctgaaggcagtgtatggctggggtttggggggggggataaataaggg
agaataagacactgacaagacaggcaataaatacctgaacctgtggataa
attagtgaaataaaagagggtgttagtgggtctgtaaatatgctgttttt
cagtctatacaacatctggatcaagttaggatggaatgaagaacttgtta
aacacacaactccaaacaaactgttaatggtccaggactggggttgatga
atttgcatttcttaggatcctcaggtggagctagtgctcctgatgtagag
agcacccttggcttagttcactgagaaaaactaaacagcattcagtgacc
aagttttaccccaaaggtacacatgcttactcttgagtttagctacaaag
caggccatctaacaacatgagtaagctaagatagcaagcattgtttcctg
gactagaccacgccctgcagagatgatcacagcaaaattgtcgttacctc
atacgttggaggagggcagatctttttgttacgggtccatagatggttta
ggaatctatttgcatattccctccttgaatcagccagggtttcaaagtgc
tggacaaaaggaaaaagtctccttcttgccagtcatgaaactgtgggcct
aggatagagatgagactatgaggacactgggcacgaggaaagattagttt
tgttactaacactttgcagtcagtaattgttagattcagaacagaggtgc
agtgaaagttccattaaatcccaacatgtctacacttaaaacaaaaccac
atattggtttaaacccacttattctgcctctctctgctgttaatgcctgt
gtatttggcgggggaaactctcactgtataatgttgcttctcctctcgaa
cccatgatttgagttctatatctacatactacagatcatccattctaacc
attgagttgccggtttggtctgatatcaactgcgatgtagcc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_58637348_58638302
seq2: B6Ng01-116L19.b_185_1135

seq1  AAATAAGGCAGAATAAGACACTGACAAGACAGGCAATAAATACCTGAACC  50
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGGGAGAATAAGACACTGACAAGACAGGCAATAAATACCTGAACC  50

seq1  TGTGGATAAATTAGTGAAATAAAAGAGGGTGTTAGTGGGTCTGTAAATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGATAAATTAGTGAAATAAAAGAGGGTGTTAGTGGGTCTGTAAATAT  100

seq1  GCTGTTTTTCAGTCTATACAACATCTGGATCAAGTTAGGATGGAATGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTTTTCAGTCTATACAACATCTGGATCAAGTTAGGATGGAATGAAG  150

seq1  AACTTGTTAAACACACAACTCCAAACAAACTGTTAATGGTCCAGGACTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGTTAAACACACAACTCCAAACAAACTGTTAATGGTCCAGGACTGG  200

seq1  GGTTGATGAATTTGCATTTCTTAGGATCCTCAGGTGGAGCTAGTGCTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGATGAATTTGCATTTCTTAGGATCCTCAGGTGGAGCTAGTGCTCCT  250

seq1  GATGTAGAGAGCACCCTTGGCTTAGTTCACTGAGAAAAACTAAACAGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTAGAGAGCACCCTTGGCTTAGTTCACTGAGAAAAACTAAACAGCAT  300

seq1  TCAGTGACCAAGTTTTACCCCAAAGGTACACATGCTTACTCTTGAGTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGACCAAGTTTTACCCCAAAGGTACACATGCTTACTCTTGAGTTTA  350

seq1  GCTACAAAGCAGGCCATCTAACAACATGAGTAAGCTAAGATAGCAAGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAAAGCAGGCCATCTAACAACATGAGTAAGCTAAGATAGCAAGCAT  400

seq1  TGTTTCCTGGACTAGACCACGCCCTGCAGAGATGATCACAGCAAAATTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCTGGACTAGACCACGCCCTGCAGAGATGATCACAGCAAAATTGT  450

seq1  CGTTACCTCATACGTTGGAGGAGGGCAGATCTTTTTGTTACGGGTCCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTACCTCATACGTTGGAGGAGGGCAGATCTTTTTGTTACGGGTCCATA  500

seq1  GATGGTTTAGGAATCTATTTGCATATTCCCTCCTTGAATCAGCCAGGGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTTTAGGAATCTATTTGCATATTCCCTCCTTGAATCAGCCAGGGTT  550

seq1  TCAAAGTGCTGGACAAAAGG-AAAAGTCTCCTTCTTGCCAGTCATGAAAC  599
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TCAAAGTGCTGGACAAAAGGAAAAAGTCTCCTTCTTGCCAGTCATGAAAC  600

seq1  TGTGGGCCTAGGATAGAGATGAGACTATGAGGACACTGGGCACGAGGAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGCCTAGGATAGAGATGAGACTATGAGGACACTGGGCACGAGGAAA  650

seq1  GATTAGTTTTGTTACTAACAC-TTGCAGTCAGTAATTGTTAGATTCAGAA  698
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GATTAGTTTTGTTACTAACACTTTGCAGTCAGTAATTGTTAGATTCAGAA  700

seq1  CAGAGGTGCAGTGAAAGTTCCATT-AATCCCAACATGTCTACACTTAAAA  747
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CAGAGGTGCAGTGAAAGTTCCATTAAATCCCAACATGTCTACACTTAAAA  750

seq1  CAAAACCACATATTGGTATAAACCCACTTATTCTGCCTCTCTCTGCTGTT  797
      ||||||||||||||||| |||||||||||||||||||||||||||||| |
seq2  CAAAACCACATATTGGTTTAAACCCACTTATTCTGCCTCTCTCTGCTG-T  799

seq1  TAATGCCTGTGTATTTGGTGGGGGAAACACCCACTG-AAAATGTTGGCTT  846
      |||||||||||||||||| ||||||||| | ||||| | |||||||   |
seq2  TAATGCCTGTGTATTTGGCGGGGGAAACTCTCACTGTATAATGTTG--CT  847

seq1  TCTCCTTCTCGTAGCCCATGATTAGAGTTCTAAATCAACAGACCACAAAT  896
      ||||| ||||| | ||||||||| |||||||| ||| ||| || ||| ||
seq2  TCTCC-TCTCG-AACCCATGATTTGAGTTCTATATCTACATACTACAGAT  895

seq1  CATCCACATCCTAACCATTGAGTTGCC-GTTTTGCCTAATATCAAATTGC  945
      ||||  ||| ||||||||||||||||| |||| | || ||||| || |||
seq2  CATC--CATTCTAACCATTGAGTTGCCGGTTTGGTCTGATATC-AACTGC  942

seq1  AGATGTAGCC  955
       |||||||||
seq2  -GATGTAGCC  951