BAC Information

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BAC

Clone NameB6Ng01-118O13
Chromosome16 (Build37)
Map Location 83,753,892 - 83,914,181
singlet/doubletdoublet
Overlap genenone
Upstream geneEG545172, LOC100039572
Downstream geneEG621729, LOC640489, LOC665664, LOC547311, LOC100039893, LOC100039634, Mrpl39, Jam2, Atp5j, LOC100039950, Gabpa, Gm311
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118O13.bB6Ng01-118O13.g
ACCDH923264DH923265
length1,1621,084
definitionDH923264|Mus musculus domesticus DNA, BAC clone: B6Ng01-118O13, 5' end.DH923265|Mus musculus domesticus DNA, BAC clone: B6Ng01-118O13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,913,010 - 83,914,181)(83,753,892 - 83,754,995)
sequence
gaattctttgtgtagtgatccagacattttaaagatacccatgctccaat
atatagtctaatacccatgcacacatagacacaataaatagactcagtgg
gttttctatttaaagatagaaaaatagtgaaaccatgagcttgaaagcaa
acagtggaaaatagaggatgaattggagggtatttagtgggatttatatt
agttccaaacatattgaatttatgtatgaatgttaattaaaataattaaa
aattacattatacatctttaatagaaaataattcaaaacaaaactcagtg
ctattcatcaaatatgtgatagacccaaaccactgaagggcaattgattt
gaatggaactaatacaagataatgtattgttttcattgattaaaaaatta
agacatataataaggtacttaataaagttcaccaaaatgtacaaaatgga
gacataatatttacaaacagacacaaaatatatggatatctttaatatag
ttatcatgtaaattccaacaatataaagtattatatctgggaaggatggt
aattacaaaaaacatataatcattatttattcatataaatgcatttgact
tatttctgttgcactaagctcatgagaataaaattttaagtcaaacctat
cttaagggcctatgattaaatacaaagctattgttaagttaaggttaagt
gtttgccatataaattaacaatattttccacactcttatatctcacacct
ggcctatgagattgttaatttctaaatatgtaatagttactattcatacc
tagataattttagtatgtgtaagaaaatgtatcctttaatcatctataaa
ttattttaagagtatattcttcctgtgatgaacagaaaaaaaatctctat
ttaatagctttattttttgagaatatcattagtgagcagcacacctccac
tagtttgactcccatttttctttcctctaacttcctgtgacttacccctc
tgaaattcatacctcatctttattacttttatacatattgcaacccacct
gcatgcagagatgtatatctactactgtatttatttatactcctccaatg
tatatatcaaggctgatcatttgcattggaaatgcatgtggggagtgctg
aatgatttctgc
gaattccaatgttttgggggtttattttacctttgacataaaagatgatt
taaaatcattaaaagtgagtattctttccacaaccatggtttctatggag
ccagttttattttatataatatagtttctttcacagtagtaaacaataat
gtcttgccctgaaagttcgtggggaaacaaatttaatttctttttattag
aatttttttttattttctttgtgagccacactctagtgttatgtatttgc
ctcacatagaacattttaaaaataagtgcattgtaaaaaataagcacata
gcaaaaactagatgcttaccaaaattcaatggccctaaacattgcccata
taaaacagatttccagttatattcctgcttcgttatcagaggagatattt
tgctttatttatctatgttactgaaatagatcagaacaatagccaaacat
taaattgtcaacattaagatggcacttgtaagaagttgaaagtaatttaa
atttaattaaattaaatagaatttgaggaaagtacttattttacccatag
tgacatttcaatggttgtgcttgctataaatgtagtgttaaatgtatctt
tttcaaatcttttaaatttttaaatagatttaaagtactcaaattgaggt
atagatctctaaagacatgtaggcagccagagcctaaaagatggagcagg
tttctggtacactgttgccataaacaacaccactgagcaggagctagcca
gaatctggagccaacctctccctagctggtgcatgcaaattaagactgac
caatcccaggaggatacaaagcttttcctgtgctggggtgtatataagga
atcttccctggatgcccgcggttcccatagcatcaaggcgttcctacaat
aaagctgttgagaagatccgaccatgttgcattttccttgcctagacgag
tgggtacgacatgaatagcatttctttgtttgttttctttttcttttcat
ataatatgaaaatgtttatagtgtctctaaatctcaaataaatattctaa
aatatgtgtagacagacttaactttagtgattgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_83913010_83914181
seq2: B6Ng01-118O13.b_49_1210 (reverse)

seq1  GCAGAAATCATTTCAAGCACTCCCCACATGCATTTTCCAATTGCAAATGA  50
      ||||||||||||   ||||||||||||||||| ||||||| |||||||||
seq2  GCAGAAATCATT--CAGCACTCCCCACATGCA-TTTCCAA-TGCAAATGA  46

seq1  TCAGCCCTGGATATATACATTTGAGGAGTATTAAATAAATACAGTAGTTA  100
      |||| ||| |||||||||||| |||||||| |||||||||||||||| ||
seq2  TCAG-CCTTGATATATACATTGGAGGAGTA-TAAATAAATACAGTAG-TA  93

seq1  GATATACATCTCTGCATGCAGGTGTGTTTGCATATGTATTAAAAGTTAAT  150
      |||||||||||||||||||||||| |||   ||||||| |||||| ||||
seq2  GATATACATCTCTGCATGCAGGTGGGTTGCAATATGTA-TAAAAG-TAAT  141

seq1  AAAGATGAGGTTATGAATTTCAGAGGGGTAAGTCACAGGAAGTTAGAGGA  200
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGAGG-TATGAATTTCAGAGGGGTAAGTCACAGGAAGTTAGAGGA  190

seq1  AAGAAAAATGGGAGTCAAACTAGTGGAGGTGTGCTGCTCACTAATGATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAATGGGAGTCAAACTAGTGGAGGTGTGCTGCTCACTAATGATAT  240

seq1  TCTCAAAAAATAAAGCTATTAAATAGAGATTTTTTTTCTGTTCATCACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAAAAATAAAGCTATTAAATAGAGATTTTTTTTCTGTTCATCACAG  290

seq1  GAAGAATATACTCTTAAAATAATTTATAGATGATTAAAGGATACATTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATATACTCTTAAAATAATTTATAGATGATTAAAGGATACATTTTC  340

seq1  TTACACATACTAAAATTATCTAGGTATGAATAGTAACTATTACATATTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACATACTAAAATTATCTAGGTATGAATAGTAACTATTACATATTTA  390

seq1  GAAATTAACAATCTCATAGGCCAGGTGTGAGATATAAGAGTGTGGAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTAACAATCTCATAGGCCAGGTGTGAGATATAAGAGTGTGGAAAAT  440

seq1  ATTGTTAATTTATATGGCAAACACTTAACCTTAACTTAACAATAGCTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTAATTTATATGGCAAACACTTAACCTTAACTTAACAATAGCTTTG  490

seq1  TATTTAATCATAGGCCCTTAAGATAGGTTTGACTTAAAATTTTATTCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAATCATAGGCCCTTAAGATAGGTTTGACTTAAAATTTTATTCTCA  540

seq1  TGAGCTTAGTGCAACAGAAATAAGTCAAATGCATTTATATGAATAAATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTTAGTGCAACAGAAATAAGTCAAATGCATTTATATGAATAAATAA  590

seq1  TGATTATATGTTTTTTGTAATTACCATCCTTCCCAGATATAATACTTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTATATGTTTTTTGTAATTACCATCCTTCCCAGATATAATACTTTAT  640

seq1  ATTGTTGGAATTTACATGATAACTATATTAAAGATATCCATATATTTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTGGAATTTACATGATAACTATATTAAAGATATCCATATATTTTGT  690

seq1  GTCTGTTTGTAAATATTATGTCTCCATTTTGTACATTTTGGTGAACTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTTTGTAAATATTATGTCTCCATTTTGTACATTTTGGTGAACTTTA  740

seq1  TTAAGTACCTTATTATATGTCTTAATTTTTTAATCAATGAAAACAATACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTACCTTATTATATGTCTTAATTTTTTAATCAATGAAAACAATACA  790

seq1  TTATCTTGTATTAGTTCCATTCAAATCAATTGCCCTTCAGTGGTTTGGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTGTATTAGTTCCATTCAAATCAATTGCCCTTCAGTGGTTTGGGT  840

seq1  CTATCACATATTTGATGAATAGCACTGAGTTTTGTTTTGAATTATTTTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCACATATTTGATGAATAGCACTGAGTTTTGTTTTGAATTATTTTCT  890

seq1  ATTAAAGATGTATAATGTAATTTTTAATTATTTTAATTAACATTCATACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGATGTATAATGTAATTTTTAATTATTTTAATTAACATTCATACA  940

seq1  TAAATTCAATATGTTTGGAACTAATATAAATCCCACTAAATACCCTCCAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTCAATATGTTTGGAACTAATATAAATCCCACTAAATACCCTCCAA  990

seq1  TTCATCCTCTATTTTCCACTGTTTGCTTTCAAGCTCATGGTTTCACTATT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCCTCTATTTTCCACTGTTTGCTTTCAAGCTCATGGTTTCACTATT  1040

seq1  TTTCTATCTTTAAATAGAAAACCCACTGAGTCTATTTATTGTGTCTATGT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATCTTTAAATAGAAAACCCACTGAGTCTATTTATTGTGTCTATGT  1090

seq1  GTGCATGGGTATTAGACTATATATTGGAGCATGGGTATCTTTAAAATGTC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATGGGTATTAGACTATATATTGGAGCATGGGTATCTTTAAAATGTC  1140

seq1  TGGATCACTACACAAAGAATTC  1172
      ||||||||||||||||||||||
seq2  TGGATCACTACACAAAGAATTC  1162

seq1: chr16_83753892_83754995
seq2: B6Ng01-118O13.g_67_1150

seq1  GAATTCCAATGTTTTGGGGGTTTATTTTACCTTTGACATAAAAGATGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATGTTTTGGGGGTTTATTTTACCTTTGACATAAAAGATGATT  50

seq1  TAAAATCATTAAAAGTGAGTATTCTTTCCACAACCATGGTTTCTATGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCATTAAAAGTGAGTATTCTTTCCACAACCATGGTTTCTATGGAG  100

seq1  CCAGTTTTATTTTATATAATATAGTTTCTTTCACAGTAGTAAACAATAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTTTATTTTATATAATATAGTTTCTTTCACAGTAGTAAACAATAAT  150

seq1  GTCTTGCCCTGAAAGTTCGTGGGGAAACAAATTTAATTTCTTTTTATTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGCCCTGAAAGTTCGTGGGGAAACAAATTTAATTTCTTTTTATTAG  200

seq1  AATTTTTTTTTATTTTCTTTGTGAGCCACACTCTAGTGTTATGTATTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTTTTATTTTCTTTGTGAGCCACACTCTAGTGTTATGTATTTGC  250

seq1  CTCACATAGAACATTTTAAAAATAAGTGCATTGTAAAAAATAAGCACATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACATAGAACATTTTAAAAATAAGTGCATTGTAAAAAATAAGCACATA  300

seq1  GCAAAAACTAGATGCTTACCAAAATTCAATGGCCCTAAACATTGCCCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAACTAGATGCTTACCAAAATTCAATGGCCCTAAACATTGCCCATA  350

seq1  TAAAACAGATTTCCAGTTATATTCCTGCTTCGTTATCAGAGGAGATATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAGATTTCCAGTTATATTCCTGCTTCGTTATCAGAGGAGATATTT  400

seq1  TGCTTTATTTATCTATGTTACTGAAATAGATCAGAACAATAGCCAAACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTATTTATCTATGTTACTGAAATAGATCAGAACAATAGCCAAACAT  450

seq1  TAAATTGTCAACATTAAGATGGCACTTGTAAGAAGTTGAAAGTAATTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTGTCAACATTAAGATGGCACTTGTAAGAAGTTGAAAGTAATTTAA  500

seq1  ATTTAATTAAATTAAATAGAATTTGAGGAAAGTACTTATTTTACCCATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATTAAATTAAATAGAATTTGAGGAAAGTACTTATTTTACCCATAG  550

seq1  TGACATTTCAATGGTTGTGCTTGCTATAAATGTAGTGTTAAATGTATCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATTTCAATGGTTGTGCTTGCTATAAATGTAGTGTTAAATGTATCTT  600

seq1  TTTCAAATCTTTTAAATTTTTAAATAGATTTAAAGTACTCAAATTGAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAATCTTTTAAATTTTTAAATAGATTTAAAGTACTCAAATTGAGGT  650

seq1  ATAGATCTCTAAAGACATGTAGGCAGCCAGAGCCTAAAAGATGGAGCAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATCTCTAAAGACATGTAGGCAGCCAGAGCCTAAAAGATGGAGCAGG  700

seq1  TTTCTGGTACACTGTTGCCATAAACAACACCACTGAGCAGGAGCTAGCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGTACACTGTTGCCATAAACAACACCACTGAGCAGGAGCTAGCCA  750

seq1  GAATCTGGAGCCAACCTCTCCCTAGCTGGTGCATGCAAATTAAGACTGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTGGAGCCAACCTCTCCCTAGCTGGTGCATGCAAATTAAGACTGAC  800

seq1  CAATCCCAGGAGGATACAAAGCTTTTCCCTGTGCTGGGGTGTATATAAGG  850
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CAATCCCAGGAGGATACAAAGCTTTT-CCTGTGCTGGGGTGTATATAAGG  849

seq1  AATCCTCCCTGGATGCCCGCGGTTCCCATAGCATCAAGGCGTTCCTACAA  900
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTCCCTGGATGCCCGCGGTTCCCATAGCATCAAGGCGTTCCTACAA  899

seq1  TAAAGCTGTTGAGAAGAATCCGACCATGTTGCATTTTCCTTGCCTAGACG  950
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TAAAGCTGTTGAGAAG-ATCCGACCATGTTGCATTTTCCTTGCCTAGACG  948

seq1  AGGTGGGTACGACAATGAAATAGCAATTTCTTTGTTTTGTTTTTCTTTTT  1000
      | ||||||||||| ||| |||||| ||||||||||||   ||||||||||
seq2  A-GTGGGTACGAC-ATG-AATAGC-ATTTCTTTGTTT--GTTTTCTTTTT  992

seq1  CTTTTCATTATAATTATGAAAAATGTTTTATAGTGGTCTCTAAAATCTCA  1050
      ||||||| ||||| |||| |||||| |||||||| |||||| ||||||| 
seq2  CTTTTCA-TATAA-TATG-AAAATG-TTTATAGT-GTCTCT-AAATCTC-  1035

seq1  AAATAAATATTCTAAAATTAATTGTGTAGACAGGAACTTAACTTTAGTGA  1100
      ||||||||||||||||||    |||||||||||  |||||||||||||||
seq2  AAATAAATATTCTAAAAT---ATGTGTAGACAG--ACTTAACTTTAGTGA  1080

seq1  TTGG  1104
      ||||
seq2  TTGG  1084