BAC Information

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BAC

Clone NameB6Ng01-119E23
Chromosome16 (Build37)
Map Location 70,322,024 - 70,438,832
singlet/doubletdoublet
Overlap geneGbe1
Upstream geneSpeer2, EG664930
Downstream geneD16Ertd519e, LOC100039231
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119E23.bB6Ng01-119E23.g
ACCDH923561DH923562
length8011,025
definitionDH923561|Mus musculus domesticus DNA, BAC clone: B6Ng01-119E23, 5' end.DH923562|Mus musculus domesticus DNA, BAC clone: B6Ng01-119E23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,438,032 - 70,438,832)(70,322,024 - 70,323,040)
sequence
gaattcaaatggccagtgaagaactactgaaaataaaccaagtaaaagat
ttggcaacatggagcagaggagcacaggggcaggtgagcagccagattta
ggctacaatatggagtggcagacggcttaaggtttataataagtagagta
cagacacggacagaaatggaatagaaacgtataatgcaaacagagatcca
ggcttgaacagttagaaaatctcacttattgagttagaaaaatgaggaag
aaggaccacgggggacatggtggggcacttaatctgtaactgtgaagaca
agtattagagatccagagtactgaggaatatagcctacatgaaccagaaa
cttcaacttgggagtttgcactggaagcgtatcaaagccaaaggaaggga
tagaaaccgaatggaacagaactgaaatgtttcctgttcaggagagagat
gcaggtgggagagcagaggaaggagcaaaggaatatgggcaaacagtgag
gggagagaggccatggcaggatacattgttcaggaattaaagaaaaaaaa
aagtcttccaaggaggtggaaggatgtgactgggtcaaatgattctcaca
ggtagaggtaaccaagaaaagccactgtgtgtcaggcgtgaaggtcacca
gtggctttaacaagcacacagtttagtagagagagacagcttattgaatg
agttcagaaaataagagttacaaagcacacagagacacagagactatatt
ctgtgtgtgtgtgtctgtatctgtgtgtgtctgtgtgtgtgtgtgtgtgt
g
gaattcttttctcctgatgatatctgctcaccagtatttgttcactgctg
tcgtgaatccaggctgcttttatgttcaataaacaaagccctgcttcatt
ttgtgttaggggtaacagagacctggagcttcaacaaaaggaagacatta
aatatgtagttttataatttacatttattgatttatttaataatttcatt
gtatattctctgctactgtgtagctatggcaactaacttgtaaaacttga
ttttatttttatttttgtgtgtgtgattaatggtttcatctaaaccttgt
ttttttcccaaggtaaaaaattaactaaaatatattgctctctacctctt
ctaccttcccctgtccctcactccctcttaaattcatggcctcttatatt
aaaattatcatgttttacacacacacacacacacacacacacacgagtaa
atatacaaatacaacgcacagagttcattaagtgtagcttgcttatatat
atatatatatatatatatattggtacaaattacttggttttggataacca
gttaaggatgggttcgtctttgaggaagactggttatccctcagtagtct
ccagttgtcagtagctcttcatctgtgaaatttccctcatccttggtgcc
atagcaattggtggtattatagttgaggtcctgttcagggagcgatacag
tttgagtgcagttctcttgtgtagttagaaggcacactctttcagcaggc
ttcctggaccttttactcttagactatttctgcaatatcccctttaacct
ttaagtatagggtttgtgctgcagaacatacccagtggggttggacactc
ccttgttcattggttcaacattttagtagttgtggactttttaatataca
aataatccagataattttgggctctaaccgtaggtccattacaatgccct
gatggttgtatatgctgggggcaggagtgccactatttggaaggtggtgg
ctttgttgagtaggtgtgtcactgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_70438032_70438832
seq2: B6Ng01-119E23.b_47_847 (reverse)

seq1  CACACACACACACACACACAGACACACACAGATACAGACACACACACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACAGACACACACAGATACAGACACACACACACA  50

seq1  GAATATAGTCTCTGTGTCTCTGTGTGCTTTGTAACTCTTATTTTCTGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATAGTCTCTGTGTCTCTGTGTGCTTTGTAACTCTTATTTTCTGAAC  100

seq1  TCATTCAATAAGCTGTCTCTCTCTACTAAACTGTGTGCTTGTTAAAGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCAATAAGCTGTCTCTCTCTACTAAACTGTGTGCTTGTTAAAGCCA  150

seq1  CTGGTGACCTTCACGCCTGACACACAGTGGCTTTTCTTGGTTACCTCTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGACCTTCACGCCTGACACACAGTGGCTTTTCTTGGTTACCTCTAC  200

seq1  CTGTGAGAATCATTTGACCCAGTCACATCCTTCCACCTCCTTGGAAGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGAATCATTTGACCCAGTCACATCCTTCCACCTCCTTGGAAGACT  250

seq1  TTTTTTTTTCTTTAATTCCTGAACAATGTATCCTGCCATGGCCTCTCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTCTTTAATTCCTGAACAATGTATCCTGCCATGGCCTCTCTCC  300

seq1  CCTCACTGTTTGCCCATATTCCTTTGCTCCTTCCTCTGCTCTCCCACCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACTGTTTGCCCATATTCCTTTGCTCCTTCCTCTGCTCTCCCACCTG  350

seq1  CATCTCTCTCCTGAACAGGAAACATTTCAGTTCTGTTCCATTCGGTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTCTCCTGAACAGGAAACATTTCAGTTCTGTTCCATTCGGTTTCT  400

seq1  ATCCCTTCCTTTGGCTTTGATACGCTTCCAGTGCAAACTCCCAAGTTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTTCCTTTGGCTTTGATACGCTTCCAGTGCAAACTCCCAAGTTGAA  450

seq1  GTTTCTGGTTCATGTAGGCTATATTCCTCAGTACTCTGGATCTCTAATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGGTTCATGTAGGCTATATTCCTCAGTACTCTGGATCTCTAATAC  500

seq1  TTGTCTTCAGTGTTACAGATTAAGTGCCCCACCATGTCCCCCGTGGTCCT  550
      |||||||||  |||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTCACAGTTACAGATTAAGTGCCCCACCATGTCCCCCGTGGTCCT  550

seq1  TCTTCCTCATTTTTCTAACTCAATAAGTGAGATTTTCTAACTGTTCAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTCATTTTTCTAACTCAATAAGTGAGATTTTCTAACTGTTCAAGC  600

seq1  CTGGATCTCTGTTTGCATTATACGTTTCTATTCCATTTCTGTCCGTGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATCTCTGTTTGCATTATACGTTTCTATTCCATTTCTGTCCGTGTCT  650

seq1  GTACTCTACTTATTATAAACCTTAAGCCGTCTGCCACTCCATATTGTAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCTACTTATTATAAACCTTAAGCCGTCTGCCACTCCATATTGTAGC  700

seq1  CTAAATCTGGCTGCTCACCTGCCCCTGTGCTCCTCTGCTCCATGTTGCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATCTGGCTGCTCACCTGCCCCTGTGCTCCTCTGCTCCATGTTGCCA  750

seq1  AATCTTTTACTTGGTTTATTTTCAGTAGTTCTTCACTGGCCATTTGAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTTACTTGGTTTATTTTCAGTAGTTCTTCACTGGCCATTTGAATT  800

seq1  C  801
      |
seq2  C  801

seq1: chr16_70322024_70323040
seq2: B6Ng01-119E23.g_65_1089

seq1  GAATTCTTTTCTCCTGATGATATCTGCTCACCAGTATTTGTTCACTGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCTCCTGATGATATCTGCTCACCAGTATTTGTTCACTGCTG  50

seq1  TCGTGAATCCAGGCTGCTTTTATGTTCAATAAACAAAGCCCTGCTTCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGAATCCAGGCTGCTTTTATGTTCAATAAACAAAGCCCTGCTTCATT  100

seq1  TTGTGTTAGGGGTAACAGAGACCTGGAGCTTCAACAAAAGGAAGACATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTAGGGGTAACAGAGACCTGGAGCTTCAACAAAAGGAAGACATTA  150

seq1  AATATGTAGTTTTATAATTTACATTTATTGATTTATTTAATAATTTCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTAGTTTTATAATTTACATTTATTGATTTATTTAATAATTTCATT  200

seq1  GTATATTCTCTGCTACTGTGTAGCTATGGCAACTAACTTGTAAAACTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATTCTCTGCTACTGTGTAGCTATGGCAACTAACTTGTAAAACTTGA  250

seq1  TTTTATTTTTATTTTTGTGTGTGTGATTAATGGTTTCATCTAAACCTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTTATTTTTGTGTGTGTGATTAATGGTTTCATCTAAACCTTGT  300

seq1  TTTTTTCCCAAGGTAAAAAATTAACTAAAATATATTGCTCTCTACCTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCCCAAGGTAAAAAATTAACTAAAATATATTGCTCTCTACCTCTT  350

seq1  CTACCTTCCCCTGTCCCTCACTCCCTCTTAAATTCATGGCCTCTTATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTTCCCCTGTCCCTCACTCCCTCTTAAATTCATGGCCTCTTATATT  400

seq1  AAAATTATCATGTTTTACACACACACACACACACACACACACACGAGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTATCATGTTTTACACACACACACACACACACACACACACGAGTAA  450

seq1  ATATACAAATACAACGCACAGAGTTCATTAAGTGTAGCTTGCTTATATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACAAATACAACGCACAGAGTTCATTAAGTGTAGCTTGCTTATATAT  500

seq1  ATATATATATATATATATATTGGTACAAATTACTTGGTTTTGGATAACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATTGGTACAAATTACTTGGTTTTGGATAACCA  550

seq1  GTTAAGGATGGGTTCGTCTTTGAGGAAGACTGGTTATCCCTCAGTAGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGGATGGGTTCGTCTTTGAGGAAGACTGGTTATCCCTCAGTAGTCT  600

seq1  CCAGTTGTCAGTAGCTCTTCATCTGTGAAATTTCCCTCATCCTTGGTGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTGTCAGTAGCTCTTCATCTGTGAAATTTCCCTCATCCTTGGTGCC  650

seq1  ATAGCAATTGGTGGTATTATAGTTGAGGTCCTGTTCAGGGAGCGATACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAATTGGTGGTATTATAGTTGAGGTCCTGTTCAGGGAGCGATACAG  700

seq1  -TTGAGTGCAGTTCTCTTGTGTAGTTAGAAGGCACACTCTTTCAGCAGGC  749
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTGCAGTTCTCTTGTGTAGTTAGAAGGCACACTCTTTCAGCAGGC  750

seq1  TTCCTGGACCTTTTACTCTTAGACTATTTCTGCAATATCCCC-TTAACC-  797
      |||||||||||||||||||||||||||||||||||||||||| |||||| 
seq2  TTCCTGGACCTTTTACTCTTAGACTATTTCTGCAATATCCCCTTTAACCT  800

seq1  TTAAGTATAGGGTTTGTGCTGCAG-ACATACCCAGTGGGGTTGGACACTC  846
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTAAGTATAGGGTTTGTGCTGCAGAACATACCCAGTGGGGTTGGACACTC  850

seq1  CC-TGTTCATTGGTTCAACATTTTAGTAGTTGT-GAC-TTTTAATATACA  893
      || |||||||||||||||||||||||||||||| ||| ||||||||||||
seq2  CCTTGTTCATTGGTTCAACATTTTAGTAGTTGTGGACTTTTTAATATACA  900

seq1  AATAATCCAGATAATTTT-GGCTCTAACCGTAGGTCCATTAC-ATGCCCT  941
      |||||||||||||||||| ||||||||||||||||||||||| |||||||
seq2  AATAATCCAGATAATTTTGGGCTCTAACCGTAGGTCCATTACAATGCCCT  950

seq1  GATGGTTTGTATATGCTTGGGGCAGGGAGTGGCACTATTTGG-AGGT-GT  989
      ||||| ||||||||||| |||||| |||||| |||||||||| |||| ||
seq2  GATGG-TTGTATATGCTGGGGGCA-GGAGTGCCACTATTTGGAAGGTGGT  998

seq1  GGCTTTGTTGGAGTAGGTGTGTCACTGT  1017
      ||||||||| ||||||||||||||||||
seq2  GGCTTTGTT-GAGTAGGTGTGTCACTGT  1025