BAC Information

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BAC

Clone NameB6Ng01-119I04
Chromosome16 (Build37)
Map Location 81,797,924 - 81,882,088
singlet/doubletdoublet
Overlap geneLOC435484
Upstream geneLOC100039724, Ncam2, LOC621470
Downstream genePgk1-ps1, EG665260
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119I04.bB6Ng01-119I04.g
ACCDH923704DH923705
length1,1851,137
definitionDH923704|Mus musculus domesticus DNA, BAC clone: B6Ng01-119I04, 5' end.DH923705|Mus musculus domesticus DNA, BAC clone: B6Ng01-119I04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,880,892 - 81,882,088)(81,797,924 - 81,799,072)
sequence
gaattccatgcatcaccacacctgactctgtcttctaatacttaactcct
gtgggaaatatataaaaaaaaatacatgaagcttttgatggaaagttttt
atccaaaacatattgataatcccacctttcatttaaaggtatttgcatgt
gaaataccaacacttaccatttatagatacatactcagggcactgatatc
tgaattatcactaacaaaaacttggcaacgtgaacacagaaggttgtatt
atgtcagaagagaataagaagatacaagtgaagcggtgtccaatgggcgc
aatgcagtggcagtcacaggaaggaaaatgtggccttagagaacaaatgt
tcaggtggtatctgaccttgaaatcattacttccccttctcattttctca
aacaaaaaccgtgaaagccataataattatggtgagaaaaagctttagaa
ggaaagaattataatttcaaaacagagcattttcagctgcaacaggcccc
atatgaaagtaagacaatgcaactctttttattcctaatagagttttcct
gtagtagagttgccatgcaatagctttacaaattaaaaagaaaacaatta
gtaattttgacagatttattggtctgtgaaagtgtgactgccatcaagat
aatgatagttaattattaatagaaaaacatcaatatcttctctcctaggc
cctacaaaaagcaatgattttgaggtttgaacatgatttcagtaccaagt
atgaattacttcctgtaattttgattcatcagggatcaaatccagataag
agaacagctggttatccctagatgcagttcactggtacccaagaaatatt
ttaaaagaagggaataagtaacataaaacaaaaagagggaggtgaaaatg
ttatggaattctttttctctgaacatggcatgcttgcttttttatgtgaa
cttgaggaagcactcaatagcttcacaagatctgcatagaacagttagca
aaattgtaccatgcagtggtaagtctactagagccacatgtcttatgtga
ggagcttctgacattgtgactcttgtgattacctagtagggatcatggtg
tttttgtctagtggccactggaaagatggtctaatttactacttgaatcc
aggtccatcatgtgaacctattcattgaacctggt
gaattcctctacactgggacattgagcttccacaggaccatgggcctctt
ctcccattgatgtgagggatcaggtatgggaggagatgagggtgatatac
agagggtcaggaaattgaacagaggtgtgtagcaatgggtaatgggggac
cagggctagccacccaaaagtttcagataccagaaaagcaaaaggctcct
aggtcccaagggggagattagctgatttccttcttctaactataccaatt
ggaactaaatttggtatgatgagaattacttttgttgactgggaatgatt
aaaatgctctgagacaactctgacttaaaatttgtcagctgttttcctga
atggaaatccataccaattcttacatattgccatactgaaggctggactt
ccaacacatgaacctttgaaggaaaatccacaacctacttgactatatga
aagggagacaatgtttagtcttcaatttcttagtttcagattttttcttt
tgagaggcttaacatcactatgaattccaagtatttgttatgattattgt
ctaataaatagaaataaatactttaatctaccaacttacaccaagagtta
ttttttaaaaatggtgatttttattatatttattatgttaagtatgtagt
tggtttccaaaagaacatggctcttatttatcttcacagagtagcttgct
gagaatattagctgtagtcccagttgctgtgacaaagtctatgacaaaaa
cagtttaaggaaggcattgtttattccactgtacatgctgagcgaacagt
ctactttggcagtcagcagtggagagaacttgttgcctagtaccttcagg
caggaagcagataaataatgtcagcacctagctacattctcctttgaact
tggttcaggaggaaagcccatgaataccaccattcacacttggattcttc
ttcctatcacagttaatgcagtctagaaactactaacacgtgaccagaat
ttcaccctcatggggtgacttcaagctccatgagtcttcaactgacttta
actattgcacttagctactgttttccccttacttgcatctttgttttgga
atttttttttttttatttaggaactgtctagcagtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_81880892_81882088
seq2: B6Ng01-119I04.b_46_1230 (reverse)

seq1  ACCAGGTTCAATGAATAGTGTCCACATGCACTTGACCTTGGAATCAAGTA  50
      |||||||||||||||||| || ||||||   | |||| |||| |||||||
seq2  ACCAGGTTCAATGAATAG-GTTCACATG--ATGGACC-TGGATTCAAGTA  46

seq1  GTTAAATAAGAACAATCTTT-CAGTGGCCCAACTAGACAAAAACAACCCA  99
      | ||||| || || |||||| ||||||||  ||||||||||||||  |||
seq2  G-TAAATTAG-ACCATCTTTCCAGTGGCC--ACTAGACAAAAACA--CCA  90

seq1  TGATCCCCTACTAGGTAATCAC-AGAGTCAC-ATGTCAGAAGCTCCTCAC  147
      |||| ||||||||||||||||| |||||||| ||||||||||||||||||
seq2  TGAT-CCCTACTAGGTAATCACAAGAGTCACAATGTCAGAAGCTCCTCAC  139

seq1  AT-AGACATGTGGCTTCCTAGTAGACTTACCCACTGCATGGTACAATTTT  196
      || ||||||||||||  |||||||||||| ||||||||||||||||||||
seq2  ATAAGACATGTGGCT--CTAGTAGACTTA-CCACTGCATGGTACAATTTT  186

seq1  GCCTAACTTGTTCTATTGCAGATCTTTGTGAAGCTATTGAGTGCTTCCTC  246
      | ||||| ||||||| |||||||| |||||||||||||||||||||||||
seq2  G-CTAAC-TGTTCTA-TGCAGATC-TTGTGAAGCTATTGAGTGCTTCCTC  232

seq1  AAGTTCACAT-AAAAAGCAAGCATGCCATGTTCAGAG-AAAAGAATTCCA  294
      |||||||||| |||||||||||||||||||||||||| ||||||||||||
seq2  AAGTTCACATAAAAAAGCAAGCATGCCATGTTCAGAGAAAAAGAATTCCA  282

seq1  TAACATTTTCACCTCCCTCTTTTTGTTTTATGTTACTTATTCCCTTCTTT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATTTTCACCTCCCTCTTTTTGTTTTATGTTACTTATTCCCTTCTTT  332

seq1  TAAAATATTTCTTGGGTACCAGTGAACTGCATCTAGGGATAACCAGCTGT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATTTCTTGGGTACCAGTGAACTGCATCTAGGGATAACCAGCTGT  382

seq1  TCTCTTATCTGGATTTGATCCCTGATGAATCAAAATTACAGGAAGTAATT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTATCTGGATTTGATCCCTGATGAATCAAAATTACAGGAAGTAATT  432

seq1  CATACTTGGTACTGAAATCATGTTCAAACCTCAAAATCATTGCTTTTTGT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTTGGTACTGAAATCATGTTCAAACCTCAAAATCATTGCTTTTTGT  482

seq1  AGGGCCTAGGAGAGAAGATATTGATGTTTTTCTATTAATAATTAACTATC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCTAGGAGAGAAGATATTGATGTTTTTCTATTAATAATTAACTATC  532

seq1  ATTATCTTGATGGCAGTCACACTTTCACAGACCAATAAATCTGTCAAAAT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTTGATGGCAGTCACACTTTCACAGACCAATAAATCTGTCAAAAT  582

seq1  TACTAATTGTTTTCTTTTTAATTTGTAAAGCTATTGCATGGCAACTCTAC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAATTGTTTTCTTTTTAATTTGTAAAGCTATTGCATGGCAACTCTAC  632

seq1  TACAGGAAAACTCTATTAGGAATAAAAAGAGTTGCATTGTCTTACTTTCA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGAAAACTCTATTAGGAATAAAAAGAGTTGCATTGTCTTACTTTCA  682

seq1  TATGGGGCCTGTTGCAGCTGAAAATGCTCTGTTTTGAAATTATAATTCTT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGGCCTGTTGCAGCTGAAAATGCTCTGTTTTGAAATTATAATTCTT  732

seq1  TCCTTCTAAAGCTTTTTCTCACCATAATTATTATGGCTTTCACGGTTTTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTAAAGCTTTTTCTCACCATAATTATTATGGCTTTCACGGTTTTT  782

seq1  GTTTGAGAAAATGAGAAGGGGAAGTAATGATTTCAAGGTCAGATACCACC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAGAAAATGAGAAGGGGAAGTAATGATTTCAAGGTCAGATACCACC  832

seq1  TGAACATTTGTTCTCTAAGGCCACATTTTCCTTCCTGTGACTGCCACTGC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACATTTGTTCTCTAAGGCCACATTTTCCTTCCTGTGACTGCCACTGC  882

seq1  ATTGCGCCCATTGGACACCGCTTCACTTGTATCTTCTTATTCTCTTCTGA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCGCCCATTGGACACCGCTTCACTTGTATCTTCTTATTCTCTTCTGA  932

seq1  CATAATACAACCTTCTGTGTTCACGTTGCCAAGTTTTTGTTAGTGATAAT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATACAACCTTCTGTGTTCACGTTGCCAAGTTTTTGTTAGTGATAAT  982

seq1  TCAGATATCAGTGCCCTGAGTATGTATCTATAAATGGTAAGTGTTGGTAT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATATCAGTGCCCTGAGTATGTATCTATAAATGGTAAGTGTTGGTAT  1032

seq1  TTCACATGCAAATACCTTTAAATGAAAGGTGGGATTATCAATATGTTTTG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATGCAAATACCTTTAAATGAAAGGTGGGATTATCAATATGTTTTG  1082

seq1  GATAAAAACTTTCCATCAAAAGCTTCATGTATTTTTTTTTATATATTTCC  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAAACTTTCCATCAAAAGCTTCATGTATTTTTTTTTATATATTTCC  1132

seq1  CACAGGAGTTAAGTATTAGAAGACAGAGTCAGGTGTGGTGATGCATGGAA  1194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGAGTTAAGTATTAGAAGACAGAGTCAGGTGTGGTGATGCATGGAA  1182

seq1  TTC  1197
      |||
seq2  TTC  1185

seq1: chr16_81797924_81799072
seq2: B6Ng01-119I04.g_69_1205

seq1  GAATTCCTCTACACTGGGACATTGAGCTTCCACAGGACCATGGGCCTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTACACTGGGACATTGAGCTTCCACAGGACCATGGGCCTCTT  50

seq1  CTCCCATTGATGTGAGGGATCAGGTATGGGAGGAGATGAGGGTGATATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCATTGATGTGAGGGATCAGGTATGGGAGGAGATGAGGGTGATATAC  100

seq1  AGAGGGTCAGGAAATTGAACAGAGGTGTGTAGCAATGGGTAATGGGGGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGTCAGGAAATTGAACAGAGGTGTGTAGCAATGGGTAATGGGGGAC  150

seq1  CAGGGCTAGCCACCCAAAAGTTTCAGATACCAGAAAAGCAAAAGGCTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTAGCCACCCAAAAGTTTCAGATACCAGAAAAGCAAAAGGCTCCT  200

seq1  AGGTCCCAAGGGGGAGATTAGCTGATTTCCTTCTTCTAACTATACCAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCCAAGGGGGAGATTAGCTGATTTCCTTCTTCTAACTATACCAATT  250

seq1  GGAACTAAATTTGGTATGATGAGAATTACTTTTGTTGACTGGGAATGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTAAATTTGGTATGATGAGAATTACTTTTGTTGACTGGGAATGATT  300

seq1  AAAATGCTCTGAGACAACTCTGACTTAAAATTTGTCAGCTGTTTTCCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGCTCTGAGACAACTCTGACTTAAAATTTGTCAGCTGTTTTCCTGA  350

seq1  ATGGAAATCCATACCAATTCTTACATATTGCCATACTGAAGGCTGGACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAATCCATACCAATTCTTACATATTGCCATACTGAAGGCTGGACTT  400

seq1  CCAACACATGAACCTTTGAAGGAAAATCCACAACCTACTTGACTATATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACACATGAACCTTTGAAGGAAAATCCACAACCTACTTGACTATATGA  450

seq1  AAGGGAGACAATGTTTAGTCTTCAATTTCTTAGTTTCAGATTTTTTCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGACAATGTTTAGTCTTCAATTTCTTAGTTTCAGATTTTTTCTTT  500

seq1  TGAGAGGCTTAACATCACTATGAATTCCAAGTATTTGTTATGATTATTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGGCTTAACATCACTATGAATTCCAAGTATTTGTTATGATTATTGT  550

seq1  CTAATAAATAGAAATAAATACTTTAATCTACCAACTTACACCAAGAGTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAAATAGAAATAAATACTTTAATCTACCAACTTACACCAAGAGTTA  600

seq1  TTTTTTAAAAATGGTGATTTTTATTATATTTATTATGTTAAGTATGTAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAAAATGGTGATTTTTATTATATTTATTATGTTAAGTATGTAGT  650

seq1  TGGTTTCCAAAAGAACATGGCTCTTATTTATCTTCACAGAGTAGCTTGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTCCAAAAGAACATGGCTCTTATTTATCTTCACAGAGTAGCTTGCT  700

seq1  GAGAATATTAGCTGTAGTCCCAGTTGCTGTGACAAAGTCTATGACAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATATTAGCTGTAGTCCCAGTTGCTGTGACAAAGTCTATGACAAAAA  750

seq1  CAGTTTAAGGAAGGCATTGTTTATTCCACTGTACATGCTGAGCGAACAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTAAGGAAGGCATTGTTTATTCCACTGTACATGCTGAGCGAACAGT  800

seq1  CTACTTTGGCAGTCAGCAGTGGAGAGAACTTGTTGCCTAGTACCTTCAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTGGCAGTCAGCAGTGGAGAGAACTTGTTGCCTAGTACCTTCAGG  850

seq1  CAGGAAGCAGATAAATAATGTCAGCACCTAGCTTACATTCTCCTTTGAAC  900
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CAGGAAGCAGATAAATAATGTCAGCACCTAGC-TACATTCTCCTTTGAAC  899

seq1  TTGGTCCAGGAGGAAAGCCCAATGAATACCACCATTCACACTTAGGATTC  950
      ||||| |||||||||||||| |||||||||||||||||||||| ||||||
seq2  TTGGTTCAGGAGGAAAGCCC-ATGAATACCACCATTCACACTT-GGATTC  947

seq1  TTCTTCCTATCACAGTTAAATGCAGTCTAGAAACTTACTAACAACGTGAC  1000
      ||||||||||||||||| |||||||||||||||| ||||||| |||||||
seq2  TTCTTCCTATCACAGTT-AATGCAGTCTAGAAAC-TACTAAC-ACGTGAC  994

seq1  CAGAATTTCA-CCTCAT-GGGTGACTTCAAGCTCAATGAAGTTCTTCAAC  1048
      |||||||||| |||||| |||||||||||||||| ||||   ||||||||
seq2  CAGAATTTCACCCTCATGGGGTGACTTCAAGCTCCATGA--GTCTTCAAC  1042

seq1  TGACTTTAACTATTGCACTTAGCTTACATGTTTTCTCCCTTACTTGCATC  1098
      ||||||||||||||||||||||| ||| ||||||| ||||||||||||||
seq2  TGACTTTAACTATTGCACTTAGC-TAC-TGTTTTC-CCCTTACTTGCATC  1089

seq1  -TTGTTTTTGAATCTTTTTTTTTTTTTAATTTAAGGAAACTG-CTAGCAG  1146
       ||||||| |||   |||||||||||| |||||  | ||||| |||||||
seq2  TTTGTTTTGGAA---TTTTTTTTTTTTTATTTA--GGAACTGTCTAGCAG  1134

seq1  TCA  1149
      |||
seq2  TCA  1137