BAC Information

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BAC

Clone NameB6Ng01-120L05
Chromosome16 (Build37)
Map Location 92,697,618 - 92,893,789
singlet/doubletdoublet
Overlap geneEG666023
Upstream geneCryzl1, LOC100040653, Itsn1, Atp5o, Mrps6, Slc5a3, Kcne2, 1190017O12Rik, 4930563D23Rik, Kcne1, Dscr1, 2410124H12Rik, Clic6, Runx1
Downstream geneLOC100040747, Setd4, LOC670912, Cbr1, EG435489, Cbr3, Dopey2, Morc3, Chaf1b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120L05.bB6Ng01-120L05.g
ACCDH924577DH924578
length1,1051,040
definitionDH924577|Mus musculus domesticus DNA, BAC clone: B6Ng01-120L05, 5' end.DH924578|Mus musculus domesticus DNA, BAC clone: B6Ng01-120L05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,892,690 - 92,893,789)(92,697,618 - 92,698,658)
sequence
gaattccttcctcagtgcaatgaggtagctcagtagaaggcactctgaga
ctgacactgagggaaacaactccagtatccgctcagggttgtctgggggc
agaaagcatctttggagggtgttgaagttcagttcctccagaattctggc
tcatctgtgggggactcaaacagaggatgaaatggagtctcattttataa
cctggaagtcactgtgtgggccaggatggtcttgaacttgtggttgtaag
tgagactcccgcaaagagtctgtgtttgcagaggagaggccagttgactg
attagaactacattactgtggagaggtggacatgtttctgggcagaggct
aatagctttctcttgctccctaggacagccattgcttgcctagctctctc
agagcaaatgtcctatgacttgaaatctattaattcagctgaccactggc
tttaaccaacccccatgctaagaatgtctttagataccatcttaggccta
cagaaaagtattcccctttcttgatatatctgcctctctgattacctacc
aatgtattttaaacttaccttgactcatgactgcatttattctataaaac
tataaaactttgtgaaactgctcctacaatgaaacatagaatttaggata
gcataaatctatgtgacctgggtcatggtcattcaaaatggctccagaat
aaactcttgttcctgtaagacgagagccgttgttttgcactgatgagtga
tcagcctgtcttctgctgtacagggatggtgggacattgttcatcgtgtt
tagcgtccttaagattattatgtgggtgcaactatgtttctgtttagtat
ctgtatatgtacatgtgtatacaaaaccttttgttttttccacagaaaag
attaagagagaaaattggaaatcgggtgtgcatgtatgtgtgttttgtcc
aatgtgtatctggtgtgaggctgatgatcctgcatctacacaaaggggaa
gatattctggggggctggtctatcactgcgttgctttattcccactgaac
ctaaagctcacgcttcttcttaggtttgattggtccagaaaactctaacc
accgg
gaattccattccctcagctcgtttgcatagaggagaccgacggccaatca
caggcctttccggtatcagcctgggcgcggccggctgccgcgctcctgga
attggcccgcgcgcccccgcgcgctactgtacgctgcccggcccgggact
cggtggcagcccctaccgtccccagctcccgcacccacgccgaccccgca
cccacaggcacacgctgccatgtttgcccgaagccaggcccaggttcaga
tcccacgccaggcagccacgcgcggtgctgcactcgccctgggtgggttt
gccgggcgcagcggcgccactggtggcctcggtcctggagaccccgaaac
aggaatcgagagaccggtcgggcttggggaccgagggctgcgtccggaga
agccctgggcctggagatcagcgggagggagacgccctgtgctccctgga
cacaaagctgccaccgcgaggcttcagggacctgggctggcatccgggaa
tggtccctaggcagccttgcactgcagtccatgagccaaggcttggggtc
ctgggaggacagggtgggattcggccgcaagagggttggagggctgatgg
ccgagtgggggaagctctgagcgcctccctgggccagactagcagctgag
gagaagtggcaccgagtcatttaaacaaaggccagccactgctccaccgc
agaagttttgggttttaagcatcctctccttcgcagagttgctttatttg
tgtcttttctctgcggctgggctgcggcttgattacgcagcgcgccgcgt
tctgagtgtgcgcagcggcttggagaggagttagttttctaaccaaggcc
tcaaagaactctagactacaaaaaagttgaaagcatgggggactcaggcc
acccgaactcatgagcttcgaatccacccctccagctccggcgggaatcc
gggagctctccttcagcaacgaaccactccgcttagcaatggtagggcac
ctcccccacctttgttcgtcccggcggcgcctagggattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_92892690_92893789
seq2: B6Ng01-120L05.b_44_1148 (reverse)

seq1  CCGGTGGTTTGGAGTCTTCTGGA-CAATC-AACCT-AGAAGAAGCGTGAG  47
      ||||||| || |||| ||||||| ||||| ||||| ||||||||||||||
seq2  CCGGTGG-TTAGAGTTTTCTGGACCAATCAAACCTAAGAAGAAGCGTGAG  49

seq1  CTTTAGGTTCAGTGGGAATAAAGC-ACGCAGTGATAGAGCAGCACACCAG  96
      |||||||||||||||||||||||| ||||||||||||| |||| | ||||
seq2  CTTTAGGTTCAGTGGGAATAAAGCAACGCAGTGATAGACCAGCCCCCCAG  99

seq1  -ATATCTTCCCCTCTGTGTAGATGCAGGATCATCAGCCTCACA-CAGATA  144
       |||||||||||| ||||||||||||||||||||||||||||| ||||||
seq2  AATATCTTCCCCTTTGTGTAGATGCAGGATCATCAGCCTCACACCAGATA  149

seq1  CACA-TGGAC-AAACACACATACATGCACACCCGATTTTCAATTTTCTCT  192
      |||| ||||| ||||||||||||||||||||||||||| |||||||||||
seq2  CACATTGGACAAAACACACATACATGCACACCCGATTTCCAATTTTCTCT  199

seq1  CTTAATCCTTTTCTGTGGAGAAAACAAAAAGGTTTTGTATACACATGTAC  242
      |||||| |||||||||||| ||||| ||||||||||||||||||||||||
seq2  CTTAAT-CTTTTCTGTGGAAAAAAC-AAAAGGTTTTGTATACACATGTAC  247

seq1  ATATACAGATACTAAAACAGAAACATAGTTGCACCCACATAATAATCTTA  292
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATATACAGATACT-AAACAGAAACATAGTTGCACCCACATAATAATCTTA  296

seq1  AGGACGCTAAACACGATGGACAATGT-CCACCATCCCTGTACAGCAGAAG  341
      |||||||||||||||||| ||||||| |||||||||||||||||||||||
seq2  AGGACGCTAAACACGATGAACAATGTCCCACCATCCCTGTACAGCAGAAG  346

seq1  ACAGGCTGATCACTCATCAGTGCAAAACAACGGCTCTCGTCTTACAGGAA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCTGATCACTCATCAGTGCAAAACAACGGCTCTCGTCTTACAGGAA  396

seq1  CAAGAGTTTATTCTGGAGCCATTTTGAATGACCATGACCCAGGTCACATA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGTTTATTCTGGAGCCATTTTGAATGACCATGACCCAGGTCACATA  446

seq1  GATTTATGCTATCCTAAATTCTATGTTTCATTGTAGGAGCAGTTTCACAA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATGCTATCCTAAATTCTATGTTTCATTGTAGGAGCAGTTTCACAA  496

seq1  AGTTTTATAGTTTTATAGAATAAATGCAGTCATGAGTCAAGGTAAGTTTA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTATAGTTTTATAGAATAAATGCAGTCATGAGTCAAGGTAAGTTTA  546

seq1  AAATACATTGGTAGGTAATCAGAGAGGCAGATATATCAAGAAAGGGGAAT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACATTGGTAGGTAATCAGAGAGGCAGATATATCAAGAAAGGGGAAT  596

seq1  ACTTTTCTGTAGGCCTAAGATGGTATCTAAAGACATTCTTAGCATGGGGG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTCTGTAGGCCTAAGATGGTATCTAAAGACATTCTTAGCATGGGGG  646

seq1  TTGGTTAAAGCCAGTGGTCAGCTGAATTAATAGATTTCAAGTCATAGGAC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTAAAGCCAGTGGTCAGCTGAATTAATAGATTTCAAGTCATAGGAC  696

seq1  ATTTGCTCTGAGAGAGCTAGGCAAGCAATGGCTGTCCTAGGGAGCAAGAG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTCTGAGAGAGCTAGGCAAGCAATGGCTGTCCTAGGGAGCAAGAG  746

seq1  AAAGCTATTAGCCTCTGCCCAGAAACATGTCCACCTCTCCACAGTAATGT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTATTAGCCTCTGCCCAGAAACATGTCCACCTCTCCACAGTAATGT  796

seq1  AGTTCTAATCAGTCAACTGGCCTCTCCTCTGCAAACACAGACTCTTTGCG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTAATCAGTCAACTGGCCTCTCCTCTGCAAACACAGACTCTTTGCG  846

seq1  GGAGTCTCACTTACAACCACAAGTTCAAGACCATCCTGGCCCACACAGTG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCTCACTTACAACCACAAGTTCAAGACCATCCTGGCCCACACAGTG  896

seq1  ACTTCCAGGTTATAAAATGAGACTCCATTTCATCCTCTGTTTGAGTCCCC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCAGGTTATAAAATGAGACTCCATTTCATCCTCTGTTTGAGTCCCC  946

seq1  CACAGATGAGCCAGAATTCTGGAGGAACTGAACTTCAACACCCTCCAAAG  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGATGAGCCAGAATTCTGGAGGAACTGAACTTCAACACCCTCCAAAG  996

seq1  ATGCTTTCTGCCCCCAGACAACCCTGAGCGGATACTGGAGTTGTTTCCCT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTCTGCCCCCAGACAACCCTGAGCGGATACTGGAGTTGTTTCCCT  1046

seq1  CAGTGTCAGTCTCAGAGTGCCTTCTACTGAGCTACCTCATTGCACTGAGG  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTCAGTCTCAGAGTGCCTTCTACTGAGCTACCTCATTGCACTGAGG  1096

seq1  AAGGAATTC  1100
      |||||||||
seq2  AAGGAATTC  1105

seq1: chr16_92697618_92698658
seq2: B6Ng01-120L05.g_67_1106

seq1  GAATTCCATTCCCTCAGCTCGTTTGCATAGAGGAGACCGACGGCCAATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTCCCTCAGCTCGTTTGCATAGAGGAGACCGACGGCCAATCA  50

seq1  CAGGCCTTTCCGGTATCAGCCTGGGCGCGGCCGGCTGCCGCGCTCCTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCTTTCCGGTATCAGCCTGGGCGCGGCCGGCTGCCGCGCTCCTGGA  100

seq1  ATTGGCCCGCGCGCCCCCGCGCGCTACTGTACGCTGCCCGGCCCGGGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCCCGCGCGCCCCCGCGCGCTACTGTACGCTGCCCGGCCCGGGACT  150

seq1  CGGTGGCAGCCCCTACCGTCCCCAGCTCCCGCACCCACGCCGACCCCGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGGCAGCCCCTACCGTCCCCAGCTCCCGCACCCACGCCGACCCCGCA  200

seq1  CCCACAGGCACACGCTGCCATGTTTGCCCGAAGCCAGGCCCAGGTTCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAGGCACACGCTGCCATGTTTGCCCGAAGCCAGGCCCAGGTTCAGA  250

seq1  TCCCACGCCAGGCAGCCACGCGCGGTGCTGCACTCGCCCTGGGTGGGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACGCCAGGCAGCCACGCGCGGTGCTGCACTCGCCCTGGGTGGGTTT  300

seq1  GCCGGGCGCAGCGGCGCCACTGGTGGCCTCGGTCCTGGAGACCCCGAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGGGCGCAGCGGCGCCACTGGTGGCCTCGGTCCTGGAGACCCCGAAAC  350

seq1  AGGAATCGAGAGACCGGTCGGGCTTGGGGACCGAGGGCTGCGTCCGGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATCGAGAGACCGGTCGGGCTTGGGGACCGAGGGCTGCGTCCGGAGA  400

seq1  AGCCCTGGGCCTGGAGATCAGCGGGAGGGAGACGCCCTGTGCTCCCTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTGGGCCTGGAGATCAGCGGGAGGGAGACGCCCTGTGCTCCCTGGA  450

seq1  CACAAAGCTGCCACCGCGAGGCTTCAGGGACCTGGGCTGGCATCCGGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAGCTGCCACCGCGAGGCTTCAGGGACCTGGGCTGGCATCCGGGAA  500

seq1  TGGTCCCTAGGCAGCCTTGCACTGCAGTCCATGAGCCAAGGCTTGGGGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCCTAGGCAGCCTTGCACTGCAGTCCATGAGCCAAGGCTTGGGGTC  550

seq1  CTGGGAGGACAGGGTGGGATTCGGCCGCAAGAGGGTTGGAGGGCTGATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGGACAGGGTGGGATTCGGCCGCAAGAGGGTTGGAGGGCTGATGG  600

seq1  CCGAGTGGGGGAAGCTCTGAGCGCCTCCCTGGGCCAGACTAGCAGCTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGTGGGGGAAGCTCTGAGCGCCTCCCTGGGCCAGACTAGCAGCTGAG  650

seq1  GAGAAGTGGCACCGAGTCATTTAAAC-AAGGCCAGCCACTGCTCCACCGC  699
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GAGAAGTGGCACCGAGTCATTTAAACAAAGGCCAGCCACTGCTCCACCGC  700

seq1  AGAAGTTTTGGGTTTTAAGCATCCTCTCCTTCGCAGAGTTGCTTTATTTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGAAGTTTTGGGTTTTAAGCATCCTCTCCTTCGCAGAGTTGCTTTATTT-  749

seq1  GTGTCTTTTCTCTGCGGCTGGGCTGCGGCTTGATTACGCAGCGCGCCGCG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTTTTCTCTGCGGCTGGGCTGCGGCTTGATTACGCAGCGCGCCGCG  799

seq1  TTCTGAGTGTGCGCAGCGGC-TGGAGAGGAGATAGTTTTCTAACCAAGGC  848
      |||||||||||||||||||| |||||||||| ||||||||||||||||||
seq2  TTCTGAGTGTGCGCAGCGGCTTGGAGAGGAGTTAGTTTTCTAACCAAGGC  849

seq1  CTCAAAGAACTCTAGACTACAAAAAAAGTTGAAAGCATGGGGGACTCAGG  898
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTCAAAGAACTCTAGACTAC-AAAAAAGTTGAAAGCATGGGGGACTCAGG  898

seq1  CCACCCCGAACTCATGAGC-TCGAATCCA-CCCTCCAGCTCCGGCGGGAG  946
      ||| ||||||||||||||| ||||||||| ||||||||||||||||||| 
seq2  CCA-CCCGAACTCATGAGCTTCGAATCCACCCCTCCAGCTCCGGCGGGAA  947

seq1  TCC-GGAGCTCTCCTTCAGGCAACGAACCCACTCCGCTTAAGCAATGTAG  995
      ||| |||||||||||||| |||||||| ||||||||||| |||||||   
seq2  TCCGGGAGCTCTCCTTCA-GCAACGAA-CCACTCCGCTT-AGCAATGGTA  994

seq1  GGGCACCTCCCCCACC-TTGTTCGTCCCCGCGGCGCCGAGGGCATTT  1041
      |||||||||||||||| ||||||||||| |||||||| |||| ||||
seq2  GGGCACCTCCCCCACCTTTGTTCGTCCCGGCGGCGCCTAGGG-ATTT  1040