BAC Information

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BAC

Clone NameB6Ng01-120M18
Chromosome16 (Build37)
Map Location 54,623,760 - 54,624,949
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC433027, LOC100043442
Downstream geneLOC100043449, LOC667927, LOC436421, Zpld1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120M18.bB6Ng01-120M18.g
ACCDH924645DH924646
length1,1891,195
definitionDH924645|Mus musculus domesticus DNA, BAC clone: B6Ng01-120M18, 5' end.DH924646|Mus musculus domesticus DNA, BAC clone: B6Ng01-120M18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttatgagttttattcacacttattacttgcttaacaaattttca
tgctgtttctcatctctcattttaaattaacaattaggccctcattgatt
caataggtatgttttttaaatgctgcacaactgtgcacaatttatgttga
taaaaccagcaaaaatatttattacttttctttcagtatatttttgttcc
caaggaaattaaatatttgccatgtgtaatgtacagactaggaaaatact
atattttgttaagttctacagtaatacatggaaaaaaaaagtaattcata
tgactatgtagtagaattttccctattctactcatagatccctaacagga
aacaaagtaatacatcttcataggtaatgagacatgagaagagtttgtgg
ggacaggaggcattgtcataccaaactgatagcagcttggtagcatagtt
aatatgtatttagcatacatgtacatgtccagaagtaagaagtctgaagt
ggatatcagaaggttcaggtgaagggttcaaagggtttgacttctatgag
cttcagtagcaaatctgtgaccttggcaggcccaatttctggacatctgc
agcccttgtcttgtgcccacattcttcattttcaaaatcagaaaatgttt
taatgttttggttttgacacgctcttgtcttttttaaaaaaaaaaaaatt
gattattttgtttatttacatttcgaatgttaacccccttcctggtttct
tctttgagagcccaccatctcacctcttccccctgccaccacgagggagc
tccctcacccgcatacccactcccacccaatctccatagcattcccctaa
actggggcatcaagaagtcacaggaccaagggccccccatcattttgatg
ccagacaagaccatcctctcctacatatgcaactgaggacatgggtccct
ccatgtgtattctttgggttggtgggtgtggtccctggggagctcagcgt
gtgtgttagggtgcagatcaaaagggcttggttggatactgttgttcttc
ctaatgggattgcaaccttcttcagctcctgttggcccctgggtagcagg
tccttgttctgtaaccaattcacggggtccttggtcccatcacccccttt
ggactggtgccatttttggttttctgccttttttgtggg
gaattctctgtgagttctctaccactatgtatgcctgggtgctattatga
tgataatggactatacctttgaaactataagccagccccaaataaatgct
ttcttttataagagttcctgtggtcatggtttcatagccatagaatggtg
gctaagacaacgttcttaattgtactctgtattttatttattacagcttt
atttgttttcctttgagatcacttggatactcttgtaactctgatcagcc
aaggaatacactctttagaattggtttgatggaggtgaatgctttttagg
ctgttcatgtaatggaaagttttactttttccttcaattgcaataataat
tctgagtacagtagtctaggttgccattcccggtcttgtagaatataaac
gcattgtcccaatctctttggtgttcaaagtttctattgaattaccagct
gttgttctgacaggtgttatatgtcgcttgtattcttccccttgacgctt
ccaatattcctgttttattttacatacttcttgttttaactatgatgtgt
tattggggagtttcttttctggtcatgtctatttggtgttctatgttctt
gtcctttatgggcatgtctagccttggtttggagtaattttcttttcttt
ttgaaaatattgtctatgccattgatctggattttttctctctcactaat
gctaaaaattttaaatttggacttttcttcatagtgtatatatttcctgt
ggctttcttttctgtttcttaaaattttttttcatagtctttggttattt
gctactttacatttcagaggtgacattttgtctacttgctccattctacc
tgtaaagtttctcttgtgtttctagttgggttattgagtttttcattcca
tctttacctaagcttgattctcttcattatattgtactttttatgatcca
gctctcatcttcagctgtctttggtatttcatcagcctcttctgtttgtg
tttttggcaatccacgggaactatctccttaaatcataccttctaagttc
atgtttaagtccatgagaattttttggatccttacctctgaatcagtgta
taaaggttatgctgacattagctcgttattgggttacaggtcctattgac
attcatggacacttatattgtagcgagatactcgtttactcatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_54623760_54624949
seq2: B6Ng01-120M18.b_48_1236

seq1  GAATTCTTATGAGTTTTATTCACACTTATTACTTGCTTAACAAATTTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATGAGTTTTATTCACACTTATTACTTGCTTAACAAATTTTCA  50

seq1  TGCTGTTTCTCATCTCTCATTTTAAATTAACAATTAGGCCCTCATTGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTTCTCATCTCTCATTTTAAATTAACAATTAGGCCCTCATTGATT  100

seq1  CAATAGGTATGTTTTTTAAATGCTGCACAACTGTGCACAATTTATGTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGGTATGTTTTTTAAATGCTGCACAACTGTGCACAATTTATGTTGA  150

seq1  TAAAACCAGCAAAAATATTTATTACTTTTCTTTCAGTATATTTTTGTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCAGCAAAAATATTTATTACTTTTCTTTCAGTATATTTTTGTTCC  200

seq1  CAAGGAAATTAAATATTTGCCATGTGTAATGTACAGACTAGGAAAATACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAAATTAAATATTTGCCATGTGTAATGTACAGACTAGGAAAATACT  250

seq1  ATATTTTGTTAAGTTCTACAGTAATACATGGAAAAAAAAAGTAATTCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTGTTAAGTTCTACAGTAATACATGGAAAAAAAAAGTAATTCATA  300

seq1  TGACTATGTAGTAGAATTTTCCCTATTCTACTCATAGATCCCTAACAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTATGTAGTAGAATTTTCCCTATTCTACTCATAGATCCCTAACAGGA  350

seq1  AACAAAGTAATACATCTTCATAGGTAATGAGACATGAGAAGAGTTTGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGTAATACATCTTCATAGGTAATGAGACATGAGAAGAGTTTGTGG  400

seq1  GGACAGGAGGCATTGTCATACCAAACTGATAGCAGCTTGGTAGCATAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGGAGGCATTGTCATACCAAACTGATAGCAGCTTGGTAGCATAGTT  450

seq1  AATATGTATTTAGCATACATGTACATGTCCAGAAGTAAGAAGTCTGAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTATTTAGCATACATGTACATGTCCAGAAGTAAGAAGTCTGAAGT  500

seq1  GGATATCAGAAGGTTCAGGTGAAGGGTTCAAAGGGTTTGACTTCTATGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATCAGAAGGTTCAGGTGAAGGGTTCAAAGGGTTTGACTTCTATGAG  550

seq1  CTTCAGTAGCAAATCTGTGACCTTGGCAGGCCCAATTTCTGGACATCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTAGCAAATCTGTGACCTTGGCAGGCCCAATTTCTGGACATCTGC  600

seq1  AGCCCTTGTCTTGTGCCCACATTCTTCATTTTCAAAATCAGAAAATGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTTGTCTTGTGCCCACATTCTTCATTTTCAAAATCAGAAAATGTTT  650

seq1  TAATGTTTTGGTTTTGACACGCTCTTGTCTTTTTTAAAAAAAAAAAAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTTTGGTTTTGACACGCTCTTGTCTTTTTTAAAAAAAAAAAAATT  700

seq1  GATTATTTTGTTTATTTACATTTCGAATGTTAACCCCCTTCCTGGTTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATTTTGTTTATTTACATTTCGAATGTTAACCCCCTTCCTGGTTTCT  750

seq1  TCTTTGAGAGCCCACCATCTCACCTCTTCCCCCTGCCACCACGAGGGAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGAGAGCCCACCATCTCACCTCTTCCCCCTGCCACCACGAGGGAGC  800

seq1  TCCCTCACCCGCATACCCACTCCCACCCAATCTCCATAGCATTCCCCTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCACCCGCATACCCACTCCCACCCAATCTCCATAGCATTCCCCTAA  850

seq1  ACTGGGGCATCAAGAAGTCACAGGACCAAGGGCCCCCCATCATTTTGATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGGCATCAAGAAGTCACAGGACCAAGGGCCCCCCATCATTTTGATG  900

seq1  CCAGACAAGACCATCCTCTCCTACATATGCAACTGAAGACATGGGTCCCT  950
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CCAGACAAGACCATCCTCTCCTACATATGCAACTGAGGACATGGGTCCCT  950

seq1  CCATGTGTATTCTTT-GGTTGGT-GGTGTGGTCCCT-GGGAGCTCAGGCG  997
      ||||||||||||||| ||||||| |||||||||||| ||||||||| |||
seq2  CCATGTGTATTCTTTGGGTTGGTGGGTGTGGTCCCTGGGGAGCTCA-GCG  999

seq1  TGTGTGTTAGGGTGCAGATCAAAAGGGCTTGGTT-GATACTGTTGTTCTT  1046
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TGTGTGTTAGGGTGCAGATCAAAAGGGCTTGGTTGGATACTGTTGTTCTT  1049

seq1  CCT-ATGGGATTGCAAACCTCTTCAGCTCCTGTTGGCCCCT-GGTAGCCA  1094
      ||| |||||||||||| | |||||||||||||||||||||| ||||| ||
seq2  CCTAATGGGATTGCAACCTTCTTCAGCTCCTGTTGGCCCCTGGGTAG-CA  1098

seq1  GGTCCCTG-TCTGTCACCAATCCAGCGGGTCCCTGGGTCCCCATGTCACC  1143
      ||||| || ||||| |||||| || ||||  ||| ||||||    |||||
seq2  GGTCCTTGTTCTGTAACCAATTCA-CGGGGTCCTTGGTCCC---ATCACC  1144

seq1  CCCTCTTGACTTTGTGCCATTTTTTGTTTCTTTGCTTTTTTTGTGGG  1190
      |||| | ||| | ||||||||||| |||| | ||| |||||||||||
seq2  CCCTTTGGAC-TGGTGCCATTTTTGGTTT-TCTGCCTTTTTTGTGGG  1189