BAC Information

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BAC

Clone NameB6Ng01-121H17
Chromosome16 (Build37)
Map Location 56,065,475 - 56,240,909
singlet/doubletdoublet
Overlap geneSenp7, Impg2
Upstream geneLOC436421, Zpld1, Nfkbiz, Gm1752, Lrriq2, EG667966, LOC629242, Rpl24, Zbtb11, Pcnp, Rg9mtd1
Downstream geneLOC672835, Abi3bp, Tfg, Gpr128, Tmem45a, LOC668026, LOC668036, 2310005G13Rik, Tomm70a, Nit2, Tbc1d23
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121H17.bB6Ng01-121H17.g
ACCDH925154DH925155
length6641,167
definitionDH925154|Mus musculus domesticus DNA, BAC clone: B6Ng01-121H17, 5' end.DH925155|Mus musculus domesticus DNA, BAC clone: B6Ng01-121H17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,065,475 - 56,066,139)(56,239,715 - 56,240,909)
sequence
gaattcatatacatgaaagaaagaaagaaaggaaggaaggaaggaaggaa
gggagagagagagagagagagagagagagagagagagagagagagagaga
gagagagagaaagaaagaaagaaggaaagaaggaaagaaaggaagaaaga
aagagagaaagggggggctggtgagatggctcagtgggtaagagcacccg
actgctcttccaaaggtccagagttcaaattccagcaaccacatggtggc
tcacaaccatctgtaacaagatctgactccctcttctggagtgtctgaag
acagctacagtgtacttacatataataaataaataaatcttaaaaaaaaa
agaaagaaagagagaaaggaaaagagaaagaagaaaaaaatcagaaaaaa
agctttcagaaatcagttctctcttgcactgtttggtctgggggatggag
ctcaaattgtcaggcttggtgacttcttttaatccagtttaagtgtggga
ccgtgaaagatagtctggtcccttttgagctaaggcttgaaaccccagaa
accctgaagggacggtaggctcttcacctgttcctgggcaccagcgctgt
cactagagcagtctcccatagattttggccatctgtcacataaggccccc
agcatcctccatgt
gaattcagagaaaacaagagagtactgcctctactctttcaccctcagtg
gataagccgctaagaagagaggtgatgaagccgtctccagctacacaatc
gtgggactaacatgaatcatcttactgcaaaggcggaccctgcaatacca
cgtctgtgtagagagcagtcagttcagattgaactgttttgaaaacttgt
gaatgagaacatgtcagttcgtacatccaagagcgttcttccttcagaag
gatccataggcatagtggaaatcaacagaaatacattttcagtggcatcc
actatgagtttacatgatgctgaatgaaacaatataaaatgtgtacctca
cataaatagatatgacagcctgagtagttctccctcaagcaacatcctgg
caggagccgtgactttcatgagctcaattcaaaaaaaaaaaaaaaaaaac
ctatgtgtatattcccaaacaggagaattgttactctataaaaaacatta
gtgttgggctggagagattaagagcactgactgctcttccagagatcttg
agttcaattcccagcaaccacatggtggctcacaaccatctgtaatggga
tccgatgccctcttctattgtgtctgtaaacatctaaagtgtaatatata
tatatatatatatatacatatatatatatatatatattcacatgttagtg
ttttcatagactatctttgtaaaaatatgggtgctacatgcactccagta
gtgactcacgtgacaggcctagaaacctggacacagtcccgaggctaaaa
gttcatggaaacttagtctcctggaaacttggcatttccatatccaatat
ttaccatggtctaggaaaagagggttgtgcttagaggaactatagtagtg
cattattcatgaaaggtctgctagaagcagacccctgtgcagctttcaca
aggctcaaagaatagcattgtgactagttgcgaaattcttttctagccct
gtcattagctgactctaagcagggctgcttttatcttaactgtaaacatg
gcctggtctgcagtctttcaggcattcctttgtttttgttcacataacct
catgtacttgctgctgtggcacccacctcttgttctctgatatatgacat
cgatgctaacttgacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_56065475_56066139
seq2: B6Ng01-121H17.b_41_704

seq1  GAATTCATATACATGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATACATGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAA  50

seq1  GGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  100

seq1  GAGAGAGAGAAAGAAAGAAAGAAGGAAAGAAGGAAAGAAAGGAAGAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAAAGAAAGAAAGAAGGAAAGAAGGAAAGAAAGGAAGAAAGA  150

seq1  AAGAGAGAAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGAAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCG  200

seq1  ACTGCTCTTCCAAAGGTCCAGAGTTCAAATTCCAGCAACCACATGGTGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTCTTCCAAAGGTCCAGAGTTCAAATTCCAGCAACCACATGGTGGC  250

seq1  TCACAACCATCTGTAACAAGATCTGACTCCCTCTTCTGGAGTGTCTGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAACCATCTGTAACAAGATCTGACTCCCTCTTCTGGAGTGTCTGAAG  300

seq1  ACAGCTACAGTGTACTTACATATAATAAATAAATAAATCTTAAAAAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTACAGTGTACTTACATATAATAAATAAATAAATCTTAAAAAAAAA  350

seq1  AGAAAGAAAGAGAGAAAGGAAAAGAGAAAGAAGAAAAAAATCAGAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAAGAGAGAAAGGAAAAGAGAAAGAAGAAAAAAATCAGAAAAAA  400

seq1  AGCTTTCAGAAATCAGTTCTCTCTTGCACTGTTTGGTCTGGGGGATGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCAGAAATCAGTTCTCTCTTGCACTGTTTGGTCTGGGGGATGGAG  450

seq1  CTCAAATTGTCAGGCTTGGTGACTTCTTTTAATCCAGTTTAAGTGTGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATTGTCAGGCTTGGTGACTTCTTTTAATCCAGTTTAAGTGTGGGA  500

seq1  CCGTGAAAGATAGCCTGGTCCCTTTTGAGCTAAGGCTTGAAACCCCAGAA  550
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CCGTGAAAGATAGTCTGGTCCCTTTTGAGCTAAGGCTTGAAACCCCAGAA  550

seq1  ACCCTGAAGGGACGGTAGGCTCTTCACCTGTTCCTGGGCACCAGCGCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGAAGGGACGGTAGGCTCTTCACCTGTTCCTGGGCACCAGCGCTGT  600

seq1  CACTAGAGCAGTCTCCCATAGATTTGTGGCCATCAGTCACATAAGGCCCC  650
      ||||||||||||||||||||||||| |||||||| |||||||||||||||
seq2  CACTAGAGCAGTCTCCCATAGATTT-TGGCCATCTGTCACATAAGGCCCC  649

seq1  AAGCATCCTCCATGT  665
       ||||||||||||||
seq2  CAGCATCCTCCATGT  664

seq1: chr16_56239715_56240909
seq2: B6Ng01-121H17.g_66_1232 (reverse)

seq1  TTGTCAAAGTTAGCATCAGATATTTATAATATAGAAGAAAACAAAGAAGT  50
      ||||| ||||||||||| ||    | | |||||  ||| ||| |||| ||
seq2  TTGTC-AAGTTAGCATC-GA----TGTCATATATCAGAGAAC-AAGAGGT  43

seq1  AGGGTGCCACAGCAGGCAAGGTACATTGAAGTTATGTGACACAAAACAGA  100
       ||||||||||||| |||| ||||| ||| |||||||||   |||||| |
seq2  -GGGTGCCACAGCA-GCAA-GTACA-TGAGGTTATGTGAACAAAAACAAA  89

seq1  GGAATGCCTTGAAAGGACTGGCAGGAACCAGGCAATGTTTACAGTTAAGA  150
      |||||||| ||||| |||| ||||  ||||||| ||||||||||||||||
seq2  GGAATGCC-TGAAA-GACT-GCAG--ACCAGGCCATGTTTACAGTTAAGA  134

seq1  TAAAAGCAGCCCTGCCTAGAGTCAGCTAATGACAGGGGCTAGGAGAGGAT  200
      ||||||||||||||| |||||||||||||||||| ||||||| | || ||
seq2  TAAAAGCAGCCCTGCTTAGAGTCAGCTAATGACA-GGGCTAGAAAAGAAT  183

seq1  TTCGCAACCTAGTCACAATGCTATTCTTTTGAGCCTTGTGAAAGCTTGCA  250
      ||||||| |||||||||||||||||| |||||||||||||||||| ||||
seq2  TTCGCAA-CTAGTCACAATGCTATTC-TTTGAGCCTTGTGAAAGC-TGCA  230

seq1  CCAGGGGGTTCTGC-TCTAGCAGACCTTTTCATGAATAATGCACTACTAT  299
       ||||||  ||||| ||||||||||| |||||||||||||||||||||||
seq2  -CAGGGG--TCTGCTTCTAGCAGACC-TTTCATGAATAATGCACTACTAT  276

seq1  AGTTCCTCCTTAAGCCACAACCCTCCTTTTTCCTAGACCATGGTAAATTA  349
      ||||||||  |||| ||||||||||  |||||||||||||||||||| ||
seq2  AGTTCCTC--TAAG-CACAACCCTC--TTTTCCTAGACCATGGTAAA-TA  320

seq1  TTGGATATGGGAATGCCAAGGTTCCAGGAGACTAAGTTTCCATGAACTTT  399
      |||||||||| ||||||||| |||||||||||||||||||||||||||||
seq2  TTGGATATGGAAATGCCAAGTTTCCAGGAGACTAAGTTTCCATGAACTTT  370

seq1  TAGCCTCGGGACTGTGTCCAGGTTTCTAGGCCTGTCACGTGAGTCACTAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTCGGGACTGTGTCCAGGTTTCTAGGCCTGTCACGTGAGTCACTAC  420

seq1  TGGAGTGCATGTAGCA-CCATATTTTTACAAAGATAGTCTATGAAAACAC  498
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TGGAGTGCATGTAGCACCCATATTTTTACAAAGATAGTCTATGAAAACAC  470

seq1  TAACATGTGAATATATATATATATATATATGTATATATATATATATATAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATGTGAATATATATATATATATATATGTATATATATATATATATAT  520

seq1  ATATTACACTTTAGATGTTTACAGACACAATAGAAGAGGGCATCGGATCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTACACTTTAGATGTTTACAGACACAATAGAAGAGGGCATCGGATCC  570

seq1  CATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAA  620

seq1  GATCTCTGGAAGAGCAGTCAGTGCTCTTAATCTCTCCAGCCCAACACTAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCTGGAAGAGCAGTCAGTGCTCTTAATCTCTCCAGCCCAACACTAA  670

seq1  TGTTTTTTATAGAGTAACAATTCTCCTGTTTGGGAATATACACATAGGTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTTATAGAGTAACAATTCTCCTGTTTGGGAATATACACATAGGTT  720

seq1  TTTTTTTTTTTTTTTTTGAATTGAGCTCATGAAAGTCACGGCTCCTGCCA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTGAATTGAGCTCATGAAAGTCACGGCTCCTGCCA  770

seq1  GGATGTTGCTTGAGGGAGAACTACTCAGGCTGTCATATCTATTTATGTGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTTGCTTGAGGGAGAACTACTCAGGCTGTCATATCTATTTATGTGA  820

seq1  GGTACACATTTTATATTGTTTCATTCAGCATCATGTAAACTCATAGTGGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACACATTTTATATTGTTTCATTCAGCATCATGTAAACTCATAGTGGA  870

seq1  TGCCACTGAAAATGTATTTCTGTTGATTTCCACTATGCCTATGGATCCTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACTGAAAATGTATTTCTGTTGATTTCCACTATGCCTATGGATCCTT  920

seq1  CTGAAGGAAGAACGCTCTTGGATGTACGAACTGACATGTTCTCATTCACA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGAAGAACGCTCTTGGATGTACGAACTGACATGTTCTCATTCACA  970

seq1  AGTTTTCAAAACAGTTCAATCTGAACTGACTGCTCTCTACACAGACGTGG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCAAAACAGTTCAATCTGAACTGACTGCTCTCTACACAGACGTGG  1020

seq1  TATTGCAGGGTCCGCCTTTGCAGTAAGATGATTCATGTTAGTCCCACGAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCAGGGTCCGCCTTTGCAGTAAGATGATTCATGTTAGTCCCACGAT  1070

seq1  TGTGTAGCTGGAGACGGCTTCATCACCTCTCTTCTTAGCGGCTTATCCAC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAGCTGGAGACGGCTTCATCACCTCTCTTCTTAGCGGCTTATCCAC  1120

seq1  TGAGGGTGAAAGAGTAGAGGCAGTACTCTCTTGTTTTCTCTGAATTC  1195
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGTGAAAGAGTAGAGGCAGTACTCTCTTGTTTTCTCTGAATTC  1167