BAC Information

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BAC

Clone NameB6Ng01-123G24
Chromosome16 (Build37)
Map Location 77,465,427 - 77,571,881
singlet/doubletdoublet
Overlap gene2810055G20Rik
Upstream gene1700063K16Rik, LOC665120, Usp25
Downstream geneLOC435483, LOC100039561, Cxadr, Btg3, D16Ertd472e
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123G24.bB6Ng01-123G24.g
ACCDH926602DH926603
length1,2151,031
definitionDH926602|Mus musculus domesticus DNA, BAC clone: B6Ng01-123G24, 5' end.DH926603|Mus musculus domesticus DNA, BAC clone: B6Ng01-123G24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,570,668 - 77,571,881)(77,465,427 - 77,466,464)
sequence
gaattcttccttgattgacaactttcaagtgatttcattatagcagtata
atcccccccccaaatagccagttggtaaacaggcttcttttagggtaatg
actgactaaagcagaccattggatatgtagaactgaataaagattatatc
ttgaataaaaaaaaagcttatttttagaaaaaaacccttggattgcttat
gccaatcatttacttgccagtttaatgatgaaggcaagtgggttgttaaa
ataaatcagttgttaaaagagcaacacaagttgaattttcatggacacgg
atgacacactctatgtgaaacgccacattcgaagaatccaacgttgagct
acatagcaaaaggcagtccacaaggcttaaggctctaagactgtgctcat
ttttataaattatagcaaaaataaaggaacaccattttccacattgacac
tgtacttgcaaactgagccttacacaaccgatgagcagaagtgcaattta
ccactgtgtggaaaaaaatgttgtgatcatgacagactggcctctataca
gtaatgaatgacctataatggcattcattcatagcatattcataatagga
gttaaaactttaagtgtacaaatgcatatttactggtcctgaaagtcacc
taagttcagtttcaaccacacttactacaatttaatttggggattctgtt
tggaaaaaatgcgtaagaattttaaaaatcaaagggggcgtttgtcatgg
aatttgaaaagcccctgactttgagtttggccatctttctggctagtagc
ttaatttcctgtggtggtttgagtatacctagcccagggagtggcactat
ttggaagtgtgaccttgttggagtagatgtgtcactgtgggtgtgtgggt
tttaaggcccttgcctttgctgcctagaagtcagtcttcttgcagccttc
agatgaagatgtagactctcagctcctcctgtaccatgcctgcctggaaa
ttgtcacacttcacccttgatgataatggactgtaacctgtaagcagcct
gactgcatgttgtcctgaataagagttgccttggtcacggtatctgttca
cactcagaaacttcaagaggaagaaacttccttaactaaaaatgatgaat
gactcacactggtgagatgggaataataaatctcttagggaacccgtgtg
tgaaggatggcatct
gaattcatggaaggaacttgacagtaagacttcagcctagatcatgctgg
gtctgaaaactcaaagttctctactttcagtaataaacttctaatgtttc
aggtacagttgaataactaagtatcttcataatatctgtatactaacttt
atattatatctcctctgttcttgagaaaacagttttcacaatatatgcaa
aaataagttgataagagaagatcagagattttattataggtcatttgcat
gaaatattcacatgttcaatctttactccacaatgaatctctttaatatt
ctgtaatatttatttatttgttcatgggcatatatgtgtgtggtatatag
caggatgcatgtttagaggtcaaacgacaacttgtaggtgttagcccttt
cccaccattatgtgggatctgggactgagttcaggtctcagactaaagac
ttgatggcaagtgcctgtaccctgaagacatctcatccgacatgtcttgt
agatagatttcatagtaaaattcaagtcctgataagaaatggctaggtta
ccataatataaaattctgctgaattttatttaatgtttgagtaaaaaatt
ataggtaatttaaaagcataaaatctgtgagatcccaggtaataaacagt
aaatagaataaaataattgtatttaagaaaagattccaggaaataaaaga
aaagagaataaaataattgtattaagggaaaaggatattaatataattaa
gatccaaaataagggaattagttgagatattttaacagaaaaagctcagt
atagtaaccgtttcattaaataaacaattctctatcagtacaaactcacc
agtgtacaagaaggacaaagaggaacaagacactgtcagcttcaatcaga
ggcctgagaaaggatgctaaacccaaagattgcaattcaatcaggagccc
taggaagaaactatacctgaacatgacctgctaaacccaaatgagggacc
agccaatggtgcagcaccaaaacatgcacgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_77570668_77571881
seq2: B6Ng01-123G24.b_47_1261 (reverse)

seq1  AGATGCCATCCCTTA-ACA---GTTCCCTAAG-GATGTTATTAATACCAT  45
      ||||||||||| | | |||   |||||||||| ||| |||||| | ||||
seq2  AGATGCCATCCTTCACACACGGGTTCCCTAAGAGAT-TTATTATTCCCAT  49

seq1  CT-ACAAGTGTTGAGTCAATCTATCATTTATAG-TAAGGAAGTTTCTTCC  93
      || || |||| ||||||| || ||||||| ||| ||||||||||||||||
seq2  CTCACCAGTG-TGAGTCATTC-ATCATTTTTAGTTAAGGAAGTTTCTTCC  97

seq1  TTCTTGAGTTTTACTGA-TGTGAACAGATACCGTGACCAAGGCAACTCTT  142
       ||||||  ||| |||| ||||||||||||||||||||||||||||||||
seq2  -TCTTGAAGTTT-CTGAGTGTGAACAGATACCGTGACCAAGGCAACTCTT  145

seq1  A-TCAGGACAACATGCAGTCAGGGCTGGCTTACAGGTTACAGTCCATTAT  191
      | ||||||||||||||||||| |||| |||||||||||||||||||||||
seq2  ATTCAGGACAACATGCAGTCA-GGCT-GCTTACAGGTTACAGTCCATTAT  193

seq1  CATCAAGGGTGAAGTGTGACAATATCCAGGCAGGCATGGTACAGGAGGAG  241
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CATCAAGGGTGAAGTGTGACAATTTCCAGGCAGGCATGGTACAGGAGGAG  243

seq1  CTGAGAGTTCTACATCTTCATCTGAAGGCTGCAAGAAGACTGACTTCTAG  291
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAG-TCTACATCTTCATCTGAAGGCTGCAAGAAGACTGACTTCTAG  292

seq1  GCAGCAAAGGCAAGGGCCTTAAAACCCACACACCCACAGTGACACATCTA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAAAGGCAAGGGCCTTAAAACCCACACACCCACAGTGACACATCTA  342

seq1  CTCCAACAAGGTCACACTTCCAAATAGTGCCACTCCCTGGGCTAGGTATA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAACAAGGTCACACTTCCAAATAGTGCCACTCCCTGGGCTAGGTATA  392

seq1  CTCAAACCACCACAGGAAATTAAGCTACTAGCCAGAAAGATGGCCAAACT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAACCACCACAGGAAATTAAGCTACTAGCCAGAAAGATGGCCAAACT  442

seq1  CAAAGTCAGGGGCTTTTCAAATTCCATGACAAACGCCCCCTTTGATTTTT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTCAGGGGCTTTTCAAATTCCATGACAAACGCCCCCTTTGATTTTT  492

seq1  AAAATTCTTACGCATTTTTTCCAAACAGAATCCCCAAATTAAATTGTAGT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCTTACGCATTTTTTCCAAACAGAATCCCCAAATTAAATTGTAGT  542

seq1  AAGTGTGGTTGAAACTGAACTTAGGTGACTTTCAGGACCAGTAAATATGC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGGTTGAAACTGAACTTAGGTGACTTTCAGGACCAGTAAATATGC  592

seq1  ATTTGTACACTTAAAGTTTTAACTCCTATTATGAATATGCTATGAATGAA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTACACTTAAAGTTTTAACTCCTATTATGAATATGCTATGAATGAA  642

seq1  TGCCATTATAGGTCATTCATTACTGTATAGAGGCCAGTCTGTCATGATCA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATTATAGGTCATTCATTACTGTATAGAGGCCAGTCTGTCATGATCA  692

seq1  CAACATTTTTTTCCACACAGTGGTAAATTGCACTTCTGCTCATCGGTTGT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATTTTTTTCCACACAGTGGTAAATTGCACTTCTGCTCATCGGTTGT  742

seq1  GTAAGGCTCAGTTTGCAAGTACAGTGTCAATGTGGAAAATGGTGTTCCTT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGCTCAGTTTGCAAGTACAGTGTCAATGTGGAAAATGGTGTTCCTT  792

seq1  TATTTTTGCTATAATTTATAAAAATGAGCACAGTCTTAGAGCCTTAAGCC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTGCTATAATTTATAAAAATGAGCACAGTCTTAGAGCCTTAAGCC  842

seq1  TTGTGGACTGCCTTTTGCTATGTAGCTCAACGTTGGATTCTTCGAATGTG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGACTGCCTTTTGCTATGTAGCTCAACGTTGGATTCTTCGAATGTG  892

seq1  GCGTTTCACATAGAGTGTGTCATCCGTGTCCATGAAAATTCAACTTGTGT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTTTCACATAGAGTGTGTCATCCGTGTCCATGAAAATTCAACTTGTGT  942

seq1  TGCTCTTTTAACAACTGATTTATTTTAACAACCCACTTGCCTTCATCATT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTTTAACAACTGATTTATTTTAACAACCCACTTGCCTTCATCATT  992

seq1  AAACTGGCAAGTAAATGATTGGCATAAGCAATCCAAGGGTTTTTTTCTAA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGCAAGTAAATGATTGGCATAAGCAATCCAAGGGTTTTTTTCTAA  1042

seq1  AAATAAGCTTTTTTTTTATTCAAGATATAATCTTTATTCAGTTCTACATA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGCTTTTTTTTTATTCAAGATATAATCTTTATTCAGTTCTACATA  1092

seq1  TCCAATGGTCTGCTTTAGTCAGTCATTACCCTAAAAGAAGCCTGTTTACC  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATGGTCTGCTTTAGTCAGTCATTACCCTAAAAGAAGCCTGTTTACC  1142

seq1  AACTGGCTATTTGGGGGGGGGATTATACTGCTATAATGAAATCACTTGAA  1191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGCTATTTGGGGGGGGGATTATACTGCTATAATGAAATCACTTGAA  1192

seq1  AGTTGTCAATCAAGGAAGAATTC  1214
      |||||||||||||||||||||||
seq2  AGTTGTCAATCAAGGAAGAATTC  1215

seq1: chr16_77465427_77466464
seq2: B6Ng01-123G24.g_67_1097

seq1  GAATTCATGGAAGGAACTTGACAGTAAGACTTCAGCCTAGATCATGCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGAAGGAACTTGACAGTAAGACTTCAGCCTAGATCATGCTGG  50

seq1  GTCTGAAAACTCAAAGTTCTCTACTTTCAGTAATAAACTTCTAATGTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAAAACTCAAAGTTCTCTACTTTCAGTAATAAACTTCTAATGTTTC  100

seq1  AGGTACAGTTGAATAACTAAGTATCTTCATAATATCTGTATACTAACTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACAGTTGAATAACTAAGTATCTTCATAATATCTGTATACTAACTTT  150

seq1  ATATTATATCTCCTCTGTTCTTGAGAAAACAGTTTTCACAATATATGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATATCTCCTCTGTTCTTGAGAAAACAGTTTTCACAATATATGCAA  200

seq1  AAATAAGTTGATAAGAGAAGATCAGAGATTTTATTATAGGTCATTTGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGTTGATAAGAGAAGATCAGAGATTTTATTATAGGTCATTTGCAT  250

seq1  GAAATATTCACATGTTCAATCTTTACTCCACAATGAATCTCTTTAATATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATTCACATGTTCAATCTTTACTCCACAATGAATCTCTTTAATATT  300

seq1  CTGTAATATTTATTTATTTGTTCATGGGCATATATGTGTGTGGTATATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAATATTTATTTATTTGTTCATGGGCATATATGTGTGTGGTATATAG  350

seq1  CAGGATGCATGTTTAGAGGTCAAACGACAACTTGTAGGTGTTAGCCCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATGCATGTTTAGAGGTCAAACGACAACTTGTAGGTGTTAGCCCTTT  400

seq1  CCCACCATTATGTGGGATCTGGGACTGAGTTCAGGTCTCAGACTAAAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCATTATGTGGGATCTGGGACTGAGTTCAGGTCTCAGACTAAAGAC  450

seq1  TTGATGGCAAGTGCCTGTACCCTGAAGACATCTCATCCGACATGTCTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGGCAAGTGCCTGTACCCTGAAGACATCTCATCCGACATGTCTTGT  500

seq1  AGATAGATTTCATAGTAAAATTCAAGTCCTGATAAGAAATGGCTAGGTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGATTTCATAGTAAAATTCAAGTCCTGATAAGAAATGGCTAGGTTA  550

seq1  CCATAATATAAAATTCTGCTGAATTTTATTTAATGTTTGAGTAAAAAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAATATAAAATTCTGCTGAATTTTATTTAATGTTTGAGTAAAAAATT  600

seq1  ATAGGTAATTTAAAAGCATAAAATCTGTGAGATCCCAGGTAATAAACAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTAATTTAAAAGCATAAAATCTGTGAGATCCCAGGTAATAAACAGT  650

seq1  AAATAGAATAAAATAATTGTATTTAAGAAAAGATTCCAGGAAATAAAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGAATAAAATAATTGTATTTAAGAAAAGATTCCAGGAAATAAAAGA  700

seq1  AAAGAGAATAAAATAATTGTATTAAGGGAAAAGGATATTAATATAATT-A  749
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AAAGAGAATAAAATAATTGTATTAAGGGAAAAGGATATTAATATAATTAA  750

seq1  GATCCAAAATAA-GGAATTAGTTGAGAAATTTTTAACAG-AAAAGCTCAG  797
      |||||||||||| |||||||||||||| | ||||||||| ||||||||||
seq2  GATCCAAAATAAGGGAATTAGTTGAGATA-TTTTAACAGAAAAAGCTCAG  799

seq1  TATAGTAAACG-TTCATTAAATAAACAATTCTCTATCAGTACAAACTCAC  846
      |||||||| || ||||||||||||||||||||||||||||||||||||||
seq2  TATAGTAACCGTTTCATTAAATAAACAATTCTCTATCAGTACAAACTCAC  849

seq1  CAGTGTACAAGAAGGACAAAGAGGAACAAGACACTGTCAGCTACAATCAG  896
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CAGTGTACAAGAAGGACAAAGAGGAACAAGACACTGTCAGCTTCAATCAG  899

seq1  AGGCCTGAGAAGGGAATGCTAAACCCCAAAGAATGCAATTCAATCAGGAG  946
      ||||||||||| || |||||||| |||||||| |||||||||||||||||
seq2  AGGCCTGAGAAAGG-ATGCTAAA-CCCAAAGATTGCAATTCAATCAGGAG  947

seq1  CCCTAGGAAGAAAACTATTACCCTGAACATGACCTGCTAAAACCCAAATG  996
      |||||||||| |||||||   ||||||||||||||||| |||||||||||
seq2  CCCTAGGAAG-AAACTAT--ACCTGAACATGACCTGCT-AAACCCAAATG  993

seq1  AGGGGACCAGCACATGGGTGCAGCACACAAACACATGCACGC  1038
      | ||||||||| ||  |||||||||| |||| ||||||||||
seq2  A-GGGACCAGC-CAATGGTGCAGCAC-CAAA-ACATGCACGC  1031