BAC Information

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BAC

Clone NameB6Ng01-123I03
Chromosome16 (Build37)
Map Location 63,085,559 - 63,086,431
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043806, Nsun3, Arl13b, Stx19, Pros1
Downstream geneEpha3, LOC100043540
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123I03.bB6Ng01-123I03.g
ACCDH926654DH926655
length1,253975
definitionDH926654|Mus musculus domesticus DNA, BAC clone: B6Ng01-123I03, 5' end.DH926655|Mus musculus domesticus DNA, BAC clone: B6Ng01-123I03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgccaatttctgagtatatctatcccaattatacattctggaac
tggggaaatcaccacaggatgtgtccggggacctactggacctactgtga
gtcggacatcagtcaaaactccattaatcacctgccctccataagcccct
actttaactggagggccacaatgtttcttgggatcccctgggatcagtgt
caactcagaaccagtatccagcagaccccgaaaagtctgattatttcctt
ttccccagtgtacagttacccttgtaaaaggccgtaggtccctctgggga
agaactggagaaagggtaacagcaaaacctttgagtgtcttatcaagatc
cttcctcagaggaacctggccaccccttcattcaaggggttccggatctg
caaactggctcaagtctggaaattgattcactggccgagattgctgttta
ccacgatctaatgtagcctttctttcattgtgctgtttccctcgatctaa
tgtagcctttctttcatttgtttgagaatttttctgcttatacagatcaa
acaaatatgcagtaggcttcctatgtatttcattcctggaaacaccatga
ttggttagccagtaccaaaggtccaaccgagtcatgccattataaatttc
acctctcctgtgctgaccattactgggtatgttattataaacattctttt
gtctacgctgtccattataataactagaatcaccttgtctcgggcgattc
aatgctgccacctggcccttgttacctcggaatccaactaaacccagtga
atttaattcatctaattgagcagaagcatctccaatgctaagatctggca
caaggaaaagggaaagaacaaaacccttcaatgtgctggtgcccctctca
ccaatttgcgtcttatagagctggtgaaaggcatatcttctggaccttcc
cattgtggacattatgctttacacatatatccactctagcatgcatttcc
ctagtcttaaatcccttcatcacacctaagccatggaatatcaggcatcc
tccagtcatttccagtaggccatctttggataacccctcagcacattcca
acaaacctatgacacttttttactatgccgacttccgtataaactagaat
ctcactcgagagaaccagtccataagctcagcctcctagtttaggtcctt
ccacctattccgacttaatcattccccacatattacccacgggatctcgc
tga
gaattccctgttttaaaagcgatacacacacatatatatcctttttaagg
attcatatatacttaaggattacagaatacatttgttgatttctattttc
ttttggggggaatacaaatgagaaggtgagacacacacacacacacaaag
tgtttaagactctcatattattctctgtacattaccaacaaaacatttaa
atattttttgtagaacattggtacaaaaactgctcaatatcagcacaaca
aatatttagatggatcagagtaaaacacaccttttgtgtgaatgacaagt
taatgttctgatttctgggaataactatgtctcacatagaatgtgcccag
tgaaaaacaatgagataaaatgtgagtatttgactgcttcaggcttatct
tagcaagaacattctagatgcgctattctaatgttttgattctctgagaa
agaagtaaaagcataaagtattggaaagctaagctgagtaaggagaagag
atttggttagagctgaggagttctacatttcccagattgtttctaaactc
catctcatgtcagcctatgtttacttgtggacttcaaaggtatggtttct
atgttgaaggctgaaatggaaactatttgtaatggtaaactgtctctgta
taacgaattatccccaaatttaaaacttaaaacaacaaaaatacattatc
tccacttctacagatcacaaccttaagagtagctgaagtacatggccctg
gcggggctcaagtcaagttgtgcatggggctactgacatctgaaaactcg
accaaggctgtggggcccacttctgtaatggcttacttccataaatgttg
gcatcaggcctgatagtcttggcaagagaccttgttcccagccacgggcc
cctgcacgagctgctggagagtcctcatggcaggacatcaagtttctacc
atgtgagtgatccattaaattctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_63085559_63086431
seq2: B6Ng01-123I03.g_67_939

seq1  GAATTCCCTGTTTTAAAAGCGATACACACACATATATATCCTTTTTAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGTTTTAAAAGCGATACACACACATATATATCCTTTTTAAGG  50

seq1  ATTCATATATACTTAAGGATTACAGAATACATTTGTTGATTTCTATTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATATATACTTAAGGATTACAGAATACATTTGTTGATTTCTATTTTC  100

seq1  TTTTGGGGGGAATACAAATGAGAAGGTGAGACACACACACACACACAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGGGGGAATACAAATGAGAAGGTGAGACACACACACACACACAAAG  150

seq1  TGTTTAAGACTCTCATATTATTCTCTGTACATTACCAACAAAACATTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAAGACTCTCATATTATTCTCTGTACATTACCAACAAAACATTTAA  200

seq1  ATATTTTTTGTAGAACATTGGTACAAAAACTGCTCAATATCAGCACAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTTGTAGAACATTGGTACAAAAACTGCTCAATATCAGCACAACA  250

seq1  AATATTTAGATGGATCAGAGTAAAACACACCTTTTGTGTGAATGACAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTAGATGGATCAGAGTAAAACACACCTTTTGTGTGAATGACAAGT  300

seq1  TAATGTTCTGATTTCTGGGAATAACTATGTCTCACATAGAATGTGCCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTCTGATTTCTGGGAATAACTATGTCTCACATAGAATGTGCCCAG  350

seq1  TGAAAAACAATGAGATAAAATGTGAGTATTTGACTGCTTCAGGCTTATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAACAATGAGATAAAATGTGAGTATTTGACTGCTTCAGGCTTATCT  400

seq1  TAGCAAGAACATTCTAGATGCGCTATTCTAATGTTTTGATTCTCTGAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAGAACATTCTAGATGCGCTATTCTAATGTTTTGATTCTCTGAGAA  450

seq1  AGAAGTAAAAGCATAAAGTATTGGAAAGCTAAGCTGAGTAAGGAGAAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTAAAAGCATAAAGTATTGGAAAGCTAAGCTGAGTAAGGAGAAGAG  500

seq1  ATTTGGTTAGAGCTGAGGAGTTCTACATTTCCCAGATTGTTTCTAAACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTTAGAGCTGAGGAGTTCTACATTTCCCAGATTGTTTCTAAACTC  550

seq1  CATCTCATGTCAGCCTATGTTTACTTGTGGACTTCAAAGGTATGGTTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCATGTCAGCCTATGTTTACTTGTGGACTTCAAAGGTATGGTTTCT  600

seq1  ATGTTGAAGGCTGAAATGGAAACTATTTGTAATGGTAAACTGTCTCTGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGAAGGCTGAAATGGAAACTATTTGTAATGGTAAACTGTCTCTGTA  650

seq1  TAACGAATTATCCCCAAATTTAAAACTTAAAACAACAAAAATACATTATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACGAATTATCCCCAAATTTAAAACTTAAAACAACAAAAATACATTATC  700

seq1  TCCACTTCTACAGATCACAACCTTAAGAGTAGCTGAAGTACATGGCCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTCTACAGATCACAACCTTAAGAGTAGCTGAAGTACATGGCCCTG  750

seq1  GCGGGGCTCAAGTCAAGTTGTGCATGGGGCTACTGACATCTGAAAACTCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGGGCTCAAGTCAAGTTGTGCATGGGGCTACTGACATCTGAAAACTCG  800

seq1  ACCAAGGCTGTGGGGCCCACTTCTGTAATGGCTTACTTCCATAAATGTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGGCTGTGGGGCCCACTTCTGTAATGGCTTACTTCCATAAATGTTG  850

seq1  GCATCAGGCCTGATAGTCTTGGC  873
      |||||||||||||||||||||||
seq2  GCATCAGGCCTGATAGTCTTGGC  873