BAC Information

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BAC

Clone NameB6Ng01-123I16
Chromosome16 (Build37)
Map Location 70,488,466 - 70,621,657
singlet/doubletdoublet
Overlap geneGbe1, D16Ertd519e
Upstream geneSpeer2, EG664930
Downstream geneLOC100039231
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123I16.bB6Ng01-123I16.g
ACCDH926680DH926681
length1,133568
definitionDH926680|Mus musculus domesticus DNA, BAC clone: B6Ng01-123I16, 5' end.DH926681|Mus musculus domesticus DNA, BAC clone: B6Ng01-123I16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,620,514 - 70,621,657)(70,488,466 - 70,489,039)
sequence
gaattcaaaggtccagtttgaatacaaataattagaattttggggtgctg
ggaatgacagtttggtcaatgaagggcttgacttccaagcacaaagaact
gaattccatccctagagccaacaataagataaatgccagaagtggtggca
tttacctgtagtgccagctccagggaggtcaagttagatgggtccctggg
actcaccggccatccagtggagcctgcttgatgacttccaggtcaatcca
agaatttgtcttaaagaaacaagatgacagctaaagagggagagacaaga
ttgtcggttttggtccacaagcacatctacacacatatattcacaataga
catatatatgtgtactttcaagatgaacacacaaataattagagtttgaa
taaacagaatacatactctttaactgtgaatgaataaaggaacagatgat
tctctatcattcgatgatttaaatgtatttttttcccttttcatccaaat
tccattctatggcaaggaaaatggatgaagggtccattttatagaaggca
gtacttgagaacccatgattccagcctcaatcacctctttaagtcaatta
attgtcttttagtctataacaggtttcagtgaagcaatgactgaggacat
tcataatgaggtgcataaatccatatagaaagctgatctggggagccttt
tctaacttacctggtagaaagcaacaagagctgcagatttgcacttttat
acaaatttacatgagctgtgcatatcaagtttgaagtgttttcacaaata
tttagttttaccttaaggcattgacagttatttgtttcctccttaattca
aaatagttaaccaaagtatttatttttctaaattaaaataaaatatgtga
aagaaataagctttaaattttaagttaatttatagtgcttctatggcctt
aacatcatgtcaagagtacacaattatgtttgtgaagacttggaactata
aactctaggaaaccattcagggtttgttaaaaaaaaaaaaaacacaaaca
acaacaacaaaaccaatgtggccatatgcttgttgctgtaatttcattgc
tgattttgaaactgggatgaagcctttggaaat
tcctgcaaatgcattagtcttgtggttttttaaataaggtggttctcaaa
actttgaagaagtattccaaagctttcacatgtctattattcaggcaaga
gaaattaatattaataaaatgttgagtggaattttgctttataaatatag
atttgtgaaactgtagtagtctgcacttaaaacacattgagctttatcaa
aacacttattcctattcataatcatctaatgatgtagaaattacttaatt
tcttgtacttactacagaatgtggtctttcagttaccaaatctcggacac
ttatgcctttattcaataatccttaccacatctcaatcagtaaaatggag
taatctggatggtagctacattttcttctcaatgtacttttatttatttt
aataattaaattaatttaggttccctctacccctctctttattccctctc
tgtgtctctctgtatccgtctctcagtttctctctctttctctctttatg
tttctctctctctctctctctctctctctctctctgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_70620514_70621657
seq2: B6Ng01-123I16.b_45_1177 (reverse)

seq1  ATTTCCAAAGGGCTTCATCACAGTTTTCAAAATCAGCAATGAAATAACAG  50
      ||||||||| ||||||||| ||| ||||||||||||||||||||| ||||
seq2  ATTTCCAAA-GGCTTCATCCCAG-TTTCAAAATCAGCAATGAAATTACAG  48

seq1  CAACAAAGCATTATGGCACCATTGGGTTTTGTTTGTTTGTTTGTTTGTG-  99
      |||| ||||| ||||||  |||| ||||||| |||||   ||||||||| 
seq2  CAAC-AAGCA-TATGGCCACATT-GGTTTTG-TTGTT--GTTGTTTGTGT  92

seq1  TTTTTTTTTTTTTAACAAACCCTGAATGGTTTCCTAGAGTTTATTAGTTC  149
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTTTTTTTTTTTTAACAAACCCTGAATGGTTTCCTAGAGTTTA-TAGTTC  141

seq1  CAAGTCTTCAACAAACATAATTGTGTACTCTTGACATGATGTTAAGGCCA  199
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCTTC-ACAAACATAATTGTGTACTCTTGACATGATGTTAAGGCCA  190

seq1  TAGAAGCACTATAAAATTAACTTAAAATTTAAAGCTTATTTCTTTCACAT  249
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TAGAAGCACTAT-AAATTAACTTAAAATTTAAAGCTTATTTCTTTCACAT  239

seq1  ATTTTATTTTAATTTAGAAAAATAAATACTTTGGTTAACTATTTTGAATT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTTTAATTTAGAAAAATAAATACTTTGGTTAACTATTTTGAATT  289

seq1  AAGGAGGAAACAAAATAACTGTCAATGCCTTAAGGTAAAACTAAATATTT  349
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGGAAAC-AAATAACTGTCAATGCCTTAAGGTAAAACTAAATATTT  338

seq1  GTGAAAACACTTCAAACTTGATATGCACAGCTCATGTAAATTTGTATAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAACACTTCAAACTTGATATGCACAGCTCATGTAAATTTGTATAAA  388

seq1  AGTGCAAATCTGCAGCTCTTGTTGCTTTCTACCAGGTAAGTTAGAAAAGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCAAATCTGCAGCTCTTGTTGCTTTCTACCAGGTAAGTTAGAAAAGG  438

seq1  CTCCCCAGATCAGCTTTCTATATGGATTTATGCACCTCATTATGAATGTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCAGATCAGCTTTCTATATGGATTTATGCACCTCATTATGAATGTC  488

seq1  CTCAGTCATTGCTTCACTGAAACCTGTTATAGACTAAAAGACAATTAATT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTCATTGCTTCACTGAAACCTGTTATAGACTAAAAGACAATTAATT  538

seq1  GACTTAAAGAGGTGATTGAGGCTGGAATCATGGGTTCTCAAGTACTGCCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTAAAGAGGTGATTGAGGCTGGAATCATGGGTTCTCAAGTACTGCCT  588

seq1  TCTATAAAATGGACCCTTCATCCATTTTCCTTGCCATAGAATGGAATTTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAAAATGGACCCTTCATCCATTTTCCTTGCCATAGAATGGAATTTG  638

seq1  GATGAAAAGGGAAAAAAATACATTTAAATCATCGAATGATAGAGAATCAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAAAGGGAAAAAAATACATTTAAATCATCGAATGATAGAGAATCAT  688

seq1  CTGTTCCTTTATTCATTCACAGTTAAAGAGTATGTATTCTGTTTATTCAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCCTTTATTCATTCACAGTTAAAGAGTATGTATTCTGTTTATTCAA  738

seq1  ACTCTAATTATTTGTGTGTTCATCTTGAAAGTACACATATATATGTCTAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAATTATTTGTGTGTTCATCTTGAAAGTACACATATATATGTCTAT  788

seq1  TGTGAATATATGTGTGTAGATGTGCTTGTGGACCAAAACCGACAATCTTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATATATGTGTGTAGATGTGCTTGTGGACCAAAACCGACAATCTTG  838

seq1  TCTCTCCCTCTTTAGCTGTCATCTTGTTTCTTTAAGACAAATTCTTGGAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCCTCTTTAGCTGTCATCTTGTTTCTTTAAGACAAATTCTTGGAT  888

seq1  TGACCTGGAAGTCATCAAGCAGGCTCCACTGGATGGCCGGTGAGTCCCAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTGGAAGTCATCAAGCAGGCTCCACTGGATGGCCGGTGAGTCCCAG  938

seq1  GGACCCATCTAACTTGACCTCCCTGGAGCTGGCACTACAGGTAAATGCCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCATCTAACTTGACCTCCCTGGAGCTGGCACTACAGGTAAATGCCA  988

seq1  CCACTTCTGGCATTTATCTTATTGTTGGCTCTAGGGATGGAATTCAGTTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTCTGGCATTTATCTTATTGTTGGCTCTAGGGATGGAATTCAGTTC  1038

seq1  TTTGTGCTTGGAAGTCAAGCCCTTCATTGACCAAACTGTCATTCCCAGCA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGCTTGGAAGTCAAGCCCTTCATTGACCAAACTGTCATTCCCAGCA  1088

seq1  CCCCAAAATTCTAATTATTTGTATTCAAACTGGACCTTTGAATTC  1144
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAAATTCTAATTATTTGTATTCAAACTGGACCTTTGAATTC  1133

seq1: chr16_70488466_70489039
seq2: B6Ng01-123I16.g_68_641

seq1  GAATTCTCCTGCAAATGCATTAGTCTTGTGGTTTTTTAAATAAGGTGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTGCAAATGCATTAGTCTTGTGGTTTTTTAAATAAGGTGGTT  50

seq1  CTCAAAACTTTGAAGAAGTATTCCAAAGCTTTCACATGTCTATTATTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAACTTTGAAGAAGTATTCCAAAGCTTTCACATGTCTATTATTCAG  100

seq1  GCAAGAGAAATTAATATTAATAAAATGTTGAGTGGAATTTTGCTTTATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAGAAATTAATATTAATAAAATGTTGAGTGGAATTTTGCTTTATAA  150

seq1  ATATAGATTTGTGAAACTGTAGTAGTCTGCACTTAAAACACATTGAGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGATTTGTGAAACTGTAGTAGTCTGCACTTAAAACACATTGAGCTT  200

seq1  TATCAAAACACTTATTCCTATTCATAATCATCTAATGATGTAGAAATTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAAACACTTATTCCTATTCATAATCATCTAATGATGTAGAAATTAC  250

seq1  TTAATTTCTTGTACTTACTACAGAATGTGGTCTTTCAGTTACCAAATCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTCTTGTACTTACTACAGAATGTGGTCTTTCAGTTACCAAATCTC  300

seq1  GGACACTTATGCCTTTATTCAATAATCCTTACCACATCTCAATCAGTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACTTATGCCTTTATTCAATAATCCTTACCACATCTCAATCAGTAAA  350

seq1  ATGGAGTAATCTGGATGGTAGCTACATTTTCTTCTCAATGTACTTTTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGTAATCTGGATGGTAGCTACATTTTCTTCTCAATGTACTTTTATT  400

seq1  TATTTTAATAATTAAATTAATTTAGGTTCCCTCTACCCCTCTCTTTATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAATAATTAAATTAATTTAGGTTCCCTCTACCCCTCTCTTTATTC  450

seq1  CCTCTCTGTGTCTCTCTGTATCCGTCTCTCAGTTTCTCTCTCTTTCTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTGTGTCTCTCTGTATCCGTCTCTCAGTTTCTCTCTCTTTCTCTC  500

seq1  TTTATGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTG  550

seq1  TGTGTGTGTGTGTGTGTGTGTGTG  574
      ||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTG  574