BAC Information

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BAC

Clone NameB6Ng01-123K07
Chromosome16 (Build37)
Map Location 33,478,945 - 33,608,535
singlet/doubletdoublet
Overlap geneZfp148, Slc12a8
Upstream geneOsta, Zdhhc19, LOC385820, Tfrc, Tnk2, ENSMUSG00000075265, LOC672302, Muc4, Muc20, 1700021K19Rik, Fyttd1, Lrch3, EG625660, Iqcg, Rpl35a, Lmln, LOC638791, Osbpl11, Snx4
Downstream gene4632417D23Rik, Heg1, Muc13, Itgb5, Umps, Kalrn, LOC100043670
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123K07.bB6Ng01-123K07.g
ACCDH926754DH926755
length1,0081,030
definitionDH926754|Mus musculus domesticus DNA, BAC clone: B6Ng01-123K07, 5' end.DH926755|Mus musculus domesticus DNA, BAC clone: B6Ng01-123K07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(33,478,945 - 33,479,646)(33,607,537 - 33,608,535)
sequence
gaattcagaaatccgcctgcctctgcctcctgagcactaggattaaaagt
gtgcaccacaaggcccagctagcagagagccttttcttttaatagtgtta
gttgtccttttttgaaaaacacatacatctttgtagccacactcttgttt
gttggtagagaaggtctgttcaaaatttttctgtcccatttaataggcag
agctatattttctgtcttgttttgcttcttccagatattatttaagagaa
aatatgtgatgtgtagtcctaaatctgaattccctcatcagtaaatttga
gtcttttgtgtttttgatgaattggtaatttgttcctttttgttgctttc
cattttatggatataagcacttgtagaagcatatatagggttgttcaatg
gtaaaaatagtatacatgggctagcgagagatagctcagtggttaggagc
acttgttggaagacccaggttcagttcccagtacccacatcgccactcac
aaccatctttaactccagtttcaggaaatctgataccctctgacttccaa
ggcaccagacggcacatggtacatagataaacaagtagacaaacatcctt
gcatataaaataaaattagtattttttaaagttgcatacagctttttggt
caacatgtgtttcacttttgaaaatatcttaggatggaatatctagttta
tattgcaaatggatatttggttttataggaaaccagtaaattactctaaa
atgattgtgctattttatatttttatagtaactgatgaactttcaatttg
ttctgtagcgtgtagattttgctatcctgctttaaggtctggaagtgggc
ctggctacaagccctcacccagagaatattagatccgtgagtgaaaaaca
cagacacatgtttttcaatttcaacctgccttattggctcaattactggg
cactactatggctaacctgcccttccaatactcttagctcagcacctctt
aacctgct
gaattcatgtccctctttggatgctggaatctgaacgccattatgaggat
ccacagagagatgttgcacattctccatatgccagcacccaaaacctcca
acttggtcctgggctgaaggcaatacagattctcagacagagctgcaaga
ggaggctgttgggtgttgggtgttcatggaacaagtaagccctttgggca
gcacaggatgcacccaccttttcagctatcaggaagtcagagcggagggc
ctctcgggtacagacggcaccaagcaggaaggcaaagatgatgtagagaa
accacctgcaaaatccaagagaaagagctgccatattgtccagccccaat
cccaccaagcctcagttttctatgggaacctgagtcatgaaagaaggcca
gccatggagccatggagaagcctgggaaggtgcattttgtactctttcta
ctctatagtgtatttcttggccaaaagaaaccaaggtagcagtggtttta
atcttatattaagaaagggtattgaagtggggaaatgggaagcccagctt
cccggacttggccagggttgacctgctgtcctgcagtccatctatcttcc
tccagtagaagaattacccagtcatgtgttggacctctccggtctctaga
ccacaggcaacagtgtacttaagtgcttttgttaacttggcacaagctag
gatcacctgaaaagaaggaacctcaactgagaaaatgtctctgtaagatt
tggcctgtgacccgtaggtgagtatagcccggcattttcttgattaagga
ttgatagcggagggtacagcccactgtgggtggtaccatccctaggcaga
atggtctgtaagaaagcagctgagcaagccaagtaagcagcattcccttc
atctatcatctctgctttccgctcctgctccagtctgactttccgccaag
gatgaatgtatactgagtttaactggttttcctccccaaggtccagcaaa
cagaaaagcatatgaaatacaccaaagggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_33478945_33479646
seq2: B6Ng01-123K07.b_46_747

seq1  GAATTCAGAAATCCGCCTGCCTCTGCCTCCTGAGCACTAGGATTAAAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAATCCGCCTGCCTCTGCCTCCTGAGCACTAGGATTAAAAGT  50

seq1  GTGCACCACAAGGCCCAGCTAGCAGAGAGCCTTTTCTTTTAATAGTGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACCACAAGGCCCAGCTAGCAGAGAGCCTTTTCTTTTAATAGTGTTA  100

seq1  GTTGTCCTTTTTTGAAAAACACATACATCTTTGTAGCCACACTCTTGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCCTTTTTTGAAAAACACATACATCTTTGTAGCCACACTCTTGTTT  150

seq1  GTTGGTAGAGAAGGTCTGTTCAAAATTTTTCTGTCCCATTTAATAGGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTAGAGAAGGTCTGTTCAAAATTTTTCTGTCCCATTTAATAGGCAG  200

seq1  AGCTATATTTTCTGTCTTGTTTTGCTTCTTCCAGATATTATTTAAGAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATATTTTCTGTCTTGTTTTGCTTCTTCCAGATATTATTTAAGAGAA  250

seq1  AATATGTGATGTGTAGTCCTAAATCTGAATTCCCTCATCAGTAAATTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTGATGTGTAGTCCTAAATCTGAATTCCCTCATCAGTAAATTTGA  300

seq1  GTCTTTTGTGTTTTTGATGAATTGGTAATTTGTTCCTTTTTGTTGCTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTGTGTTTTTGATGAATTGGTAATTTGTTCCTTTTTGTTGCTTTC  350

seq1  CATTTTATGGATATAAGCACTTGTAGAAGCATATATAGGGTTGTTCAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTATGGATATAAGCACTTGTAGAAGCATATATAGGGTTGTTCAATG  400

seq1  GTAAAAATAGTATACATGGGCTAGCGAGAGATAGCTCAGTGGTTAGGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAATAGTATACATGGGCTAGCGAGAGATAGCTCAGTGGTTAGGAGC  450

seq1  ACTTGTTGGAAGACCCAGGTTCAGTTCCCAGTACCCACATCGCCACTCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTTGGAAGACCCAGGTTCAGTTCCCAGTACCCACATCGCCACTCAC  500

seq1  AACCATCTTTAACTCCAGTTTCAGGAAATCTGATACCCTCTGACTTCCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATCTTTAACTCCAGTTTCAGGAAATCTGATACCCTCTGACTTCCAA  550

seq1  GGCACCAGACGGCACATGGTACATAGATAAACAAGTAGACAAACATCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCAGACGGCACATGGTACATAGATAAACAAGTAGACAAACATCCTT  600

seq1  GCATATAAAATAAAATTAGTATTTTTTAAAGTTGCATACAGCTTTTTGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATAAAATAAAATTAGTATTTTTTAAAGTTGCATACAGCTTTTTGGT  650

seq1  CAACATGTGTTTCACTTTTGAAAATATCTTAGGATGGAATATCTAGTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATGTGTTTCACTTTTGAAAATATCTTAGGATGGAATATCTAGTTTA  700

seq1  TA  702
      ||
seq2  TA  702

seq1: chr16_33607537_33608535
seq2: B6Ng01-123K07.g_67_1072 (reverse)

seq1  TTTCTG-TTGCTGGACCTTGGGGAGGAAA--CAGTTAATCTCAGTATACA  47
      |||||| ||||||||||||||||||||||  ||||||| |||||||||||
seq2  TTTCTGTTTGCTGGACCTTGGGGAGGAAAACCAGTTAAACTCAGTATACA  50

seq1  TTCAT-CATGGCGGAAAGTCAGACTGGAGGCAGGAGCGGAAAGCAGAGAT  96
      ||||| | |||||||||||||||||||| |||||||||||||||||||||
seq2  TTCATCCTTGGCGGAAAGTCAGACTGGA-GCAGGAGCGGAAAGCAGAGAT  99

seq1  GATAGATGAA-GGAATGCTGCTTAC-TGGCTTGCTCAGCTTGCTTTCTTA  144
      |||||||||| |||||||||||||| ||||||||||||| ||||||||||
seq2  GATAGATGAAGGGAATGCTGCTTACTTGGCTTGCTCAGC-TGCTTTCTTA  148

seq1  CAGACCA-TCTGCCTAGGGATGGTACCACCCACAGTGGGCTGTACCCTCC  193
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCATTCTGCCTAGGGATGGTACCACCCACAGTGGGCTGTACCCTCC  198

seq1  GCTATCAATCCTTAATCAAGAAAATGCC-GGCTATACTCACCTACGGGTC  242
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GCTATCAATCCTTAATCAAGAAAATGCCGGGCTATACTCACCTACGGGTC  248

seq1  ACAGGCC-AATCTTACAGAGACATTTTCTCAGTTGAGGTTCCTTCTTTTC  291
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCCAAATCTTACAGAGACATTTTCTCAGTTGAGGTTCCTTCTTTTC  298

seq1  AGGTGATCCTAGCTTGTGCCAAGTTAACAAAAGCACTTAAGTACACTGTT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGATCCTAGCTTGTGCCAAGTTAACAAAAGCACTTAAGTACACTGTT  348

seq1  GCCTGTGGTCTAGAGACCGGAGAGGTCCAACACATGACTGGGTAATTCTT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTGGTCTAGAGACCGGAGAGGTCCAACACATGACTGGGTAATTCTT  398

seq1  CTACTGGAGGAAGATAGATGGACTGCAGGACAGCAGGTCAACCCTGGCCA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGGAGGAAGATAGATGGACTGCAGGACAGCAGGTCAACCCTGGCCA  448

seq1  AGTCCGGGAAGCTGGGCTTCCCATTTCCCCACTTCAATACCCTTTCTTAA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCGGGAAGCTGGGCTTCCCATTTCCCCACTTCAATACCCTTTCTTAA  498

seq1  TATAAGATTAAAACCACTGCTACCTTGGTTTCTTTTGGCCAAGAAATACA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGATTAAAACCACTGCTACCTTGGTTTCTTTTGGCCAAGAAATACA  548

seq1  CTATAGAGTAGAAAGAGTACAAAATGCACCTTCCCAGGCTTCTCCATGGC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGAGTAGAAAGAGTACAAAATGCACCTTCCCAGGCTTCTCCATGGC  598

seq1  TCCATGGCTGGCCTTCTTTCATGACTCAGGTTCCCATAGAAAACTGAGGC  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGGCTGGCCTTCTTTCATGACTCAGGTTCCCATAGAAAACTGAGGC  648

seq1  TTGGTGGGATTGGGGCTGGACAATATGGCAGCTCTTTCTCTTGGATTTTG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGGGATTGGGGCTGGACAATATGGCAGCTCTTTCTCTTGGATTTTG  698

seq1  CAGGTGGTTTCTCTACATCATCTTTGCCTTCCTGCTTGGTGCCGTCTGTA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGGTTTCTCTACATCATCTTTGCCTTCCTGCTTGGTGCCGTCTGTA  748

seq1  CCCGAGAGGCCCTCCGCTCTGACTTCCTGATAGCTGAAAAGGTGGGTGCA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGAGAGGCCCTCCGCTCTGACTTCCTGATAGCTGAAAAGGTGGGTGCA  798

seq1  TCCTGTGCTGCCCAAAGGGCTTACTTGTTCCATGAACACCCAACACCCAA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGCTGCCCAAAGGGCTTACTTGTTCCATGAACACCCAACACCCAA  848

seq1  CAGCCTCCTCTTGCAGCTCTGTCTGAGAATCTGTATTGCCTTCAGCCCAG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTCCTCTTGCAGCTCTGTCTGAGAATCTGTATTGCCTTCAGCCCAG  898

seq1  GACCAAGTTGGAGGTTTTGGGTGCTGGCATATGGAGAATGTGCAACATCT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAGTTGGAGGTTTTGGGTGCTGGCATATGGAGAATGTGCAACATCT  948

seq1  CTCTGTGGATCCTCATAATGGCGTTCAGATTCCAGCATCCAAAGAGGGAC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGGATCCTCATAATGGCGTTCAGATTCCAGCATCCAAAGAGGGAC  998

seq1  ATGAATTC  999
      ||||||||
seq2  ATGAATTC  1006