BAC Information

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BAC

Clone NameB6Ng01-124E18
Chromosome16 (Build37)7 (Build37)
Map Location 30,642,483 - 30,643,22961,399,986 - 61,400,015
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneOpa1, Gm1968, LOC100043102, 9030404E10Rik, Hes1, EG547263, 1700025H01Rik, LOC100043110, Cpn2, Lrrc15, Gp5, Atp13a3, Tmem44, Lsg1, BC022623
Downstream geneLOC100043122, AI480653, Centb2, Ppp1r2, Apod, 1700007E05Rik, Bdh1, Gm536
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124E18.bB6Ng01-124E18.g
ACCDH927240DH927241
length747167
definitionDH927240|Mus musculus domesticus DNA, BAC clone: B6Ng01-124E18, 5' end.DH927241|Mus musculus domesticus DNA, BAC clone: B6Ng01-124E18, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(30,642,483 - 30,643,229)(61,399,986 - 61,400,015)
sequence
gaattccacagtacccacgtggcagtgcataaccatccccagtcccaggc
catccactgccctcttctggcctgcagaggtactgcacacatatggtgca
cacacacacacacgcaggcaaaacaaccaccaaccacataacttaaaaaa
aaaaaggttaaacaatttaaaaatcttaaatgctctctgattctttctca
atatttaaagggaaatgtaaggatataaaattaaaacaatatcaagaaca
gtttttggaaaacgaacagtttccaaaatcttgtttgtcgagaacaagcc
tgggaataaacacttaagttaaattcacttcttcctcttttctttttttt
tttttttaatatattgttatctccgtcttttccttctgaaaaatctcatt
taacccatgggccacaactaccaaccaactcgggaatgaagtattccagt
tggtagctaagagccagcacacagggatattacggtcccagcactgacag
cagggcctggaatacattagccactaagccagtcttcttgcagtctccat
acctgtgaaagctatttgtatcctgtcacaaggtattcacctgtgagggg
tgaagctcttaactgttcccgtgtgtcaaaaggtcaggagatgttactgt
tactgtaacatagttacgtcccattcttctatcccctggtcctggaaaaa
tgttgcaatagcagttatatcttttggtgtgtgtgtgtgtgtgtgtg
tgagagtaggagaaatagttttccgcaaggaagagcaccaagtggttgtc
caacagcaaacaaaaatccaattccctaaatgtatatacatacaagtaac
atacagaccgagcaggtgatacctatgtatgtaggattgtgtgtgtatat
gtatgtatgtatgtatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_30642483_30643229
seq2: B6Ng01-124E18.b_45_791

seq1  GAATTCCACAGTACCCACGTGGCAGTGCATAACCATCCCCAGTCCCAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAGTACCCACGTGGCAGTGCATAACCATCCCCAGTCCCAGGC  50

seq1  CATCCACTGCCCTCTTCTGGCCTGCAGAGGTACTGCACACATATGGTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCACTGCCCTCTTCTGGCCTGCAGAGGTACTGCACACATATGGTGCA  100

seq1  CACACACACACACGCAGGCAAAACAACCACCAACCACATAACTTAAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACGCAGGCAAAACAACCACCAACCACATAACTTAAAAAA  150

seq1  AAAAAGGTTAAACAATTTAAAAATCTTAAATGCTCTCTGATTCTTTCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGTTAAACAATTTAAAAATCTTAAATGCTCTCTGATTCTTTCTCA  200

seq1  ATATTTAAAGGGAAATGTAAGGATATAAAATTAAAACAATATCAAGAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTAAAGGGAAATGTAAGGATATAAAATTAAAACAATATCAAGAACA  250

seq1  GTTTTTGGAAAACGAACAGTTTCCAAAATCTTGTTTGTCGAGAACAAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGGAAAACGAACAGTTTCCAAAATCTTGTTTGTCGAGAACAAGCC  300

seq1  TGGGAATAAACACTTAAGTTAAATTCACTTCTTCCTCTTTTCTTTTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAATAAACACTTAAGTTAAATTCACTTCTTCCTCTTTTCTTTTTTTT  350

seq1  TTTTTTTAATATATTGTTATCTCCGTCTTTTCCTTCTGAAAAATCTCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAATATATTGTTATCTCCGTCTTTTCCTTCTGAAAAATCTCATT  400

seq1  TAACCCATGGGCCACAACTACCAACCAACTCGGGAATGAAGTATTCCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCATGGGCCACAACTACCAACCAACTCGGGAATGAAGTATTCCAGT  450

seq1  TGGTAGCTAAGAGCCAGCACACAGGGATATTACGGTCCCAGCACTGACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGCTAAGAGCCAGCACACAGGGATATTACGGTCCCAGCACTGACAG  500

seq1  CAGGGCCTGGAATACATTAGCCACTAAGCCAGTCTTCTTGCAGTCTCCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCCTGGAATACATTAGCCACTAAGCCAGTCTTCTTGCAGTCTCCAT  550

seq1  ACCTGTGAAAGCTATTTGTATCCTGTCACAAGGTATTCACCTGTGAGGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTGAAAGCTATTTGTATCCTGTCACAAGGTATTCACCTGTGAGGGG  600

seq1  TGAAGCTCTTAACTGTTCCCGTGTGTCAAAAGGTCAGGAGATGTTACTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCTCTTAACTGTTCCCGTGTGTCAAAAGGTCAGGAGATGTTACTGT  650

seq1  TACTGTAACATAGTTACGTCCCATTCTTCTATCCCCTGGTCCTGGAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTAACATAGTTACGTCCCATTCTTCTATCCCCTGGTCCTGGAAAAA  700

seq1  TGTTGCAATAGCAGTTATATCTTTTGGTGTGTGTGTGTGTGTGTGTG  747
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCAATAGCAGTTATATCTTTTGGTGTGTGTGTGTGTGTGTGTG  747

seq1: chr7_61399986_61400015
seq2: B6Ng01-124E18.g_210_239 (reverse)

seq1  CATACATACATACATACATATACACACACA  30
      ||||||||||||||||||||||||||||||
seq2  CATACATACATACATACATATACACACACA  30