BAC Information

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BAC

Clone NameB6Ng01-125J20
Chromosome16 (Build37)
Map Location 25,284,396 - 25,285,474
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666580, LOC100043564, 1110054M08Rik, Lpp, A730098P11Rik
Downstream gene5430420C16Rik, Trp63, LOC100043571, Leprel1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125J20.bB6Ng01-125J20.g
ACCDH928201DH928202
length1,070379
definitionDH928201|Mus musculus domesticus DNA, BAC clone: B6Ng01-125J20, 5' end.DH928202|Mus musculus domesticus DNA, BAC clone: B6Ng01-125J20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacaaacacagaggacagagttaggaatgactctcttctacatg
gtgcactgagctacattaactgatttatgttcccctctaccacccacccc
tgtggctgtagaagagctttcacagaactgccacctaggtcacaccacaa
aataaggtaataatgaggaactgcaatataagtgtcatccccagtcagac
aggggcaaatagaggttagagcagagggatgctgggtgccaccctcttaa
gagtaggaacagtggaactactgctatttcaaccactaatgtttaagggc
aagcacctgagaaagctgttgcctgtcattggcttcccagtggtcactgg
gtacctctcagcttgggctaagaggtcagtcttgccactgcctagctttc
aaatgctggggtggcaaacactgtatgccctggaggagcacaatagaaaa
acaccaagcaagaaagctggtccctgttcccacgcctgccattcactgat
gagaggtacaaggaacctagtctcctatgcctcagctgcctcttttctac
agagtgggagtcccacacccagctgttgagagaggacgtgagactgtggg
gcaataggagctctgtaaattagagtcactgacattaatatgaagtacat
gtgactacacctgacaaaggactaaaggctgtacacaggctgcccaagaa
gaagcagagtcacagaacacatgtatagggacatttaagtctttgcctct
gaagttgagagtgaaatcacagcttcatgcatgctaggcaagaaactcat
tgagctatgtgtatggcccattgtaggaatcaagagaacatttctcatgg
tgtcttatctaacatctttcttctgtgataatctggcaacttgccctccc
cttctcactccccttctgtcccagtgtccataagaaaggatggaaatgag
tgatctctagttcattacaccagcttcagtcatttcctggaaggtgacaa
ggtgctatgcatgatcacacagcatcctctccctcatagcaggttgttct
cttactgcttctgggcacag

aagtctatttcccactttcttttctaccatattcagtgtatctgatgccc
tgtggaggtttttgatccattaagagttaagtcatgttcaggatgataag
tatggatctacttggattttccttcatggggccattcagttttaccagag
tcatttgctgaagatgctgtcttttttttttttcagtgtgtatttctgaa
tttataaaaattctggtatcagtaggtgtgtggatttatatttaggtttt
aaatttcattccattaatcaaattgtctttttcttgccaataccattttg
tttttattatgattgttctgtcataaaatttaaggtccgaggtggtgata
ctgcagcaatttttcttctccctccccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_25284396_25285474
seq2: B6Ng01-125J20.b_49_1118 (reverse)

seq1  CTGTGCCCAGAAGGCAAGTAAGAGAACAACCCTGCTAATGAGGGAGAGGA  50
      |||||||||||||   ||||||||||||| |||||| |||||||||||||
seq2  CTGTGCCCAGAAG--CAGTAAGAGAACAA-CCTGCT-ATGAGGGAGAGGA  46

seq1  TTGGCTGTGTGATCATGCATAGGCAACTTTGTCACCTTCCAGGAAATGAC  100
      |  |||||||||||||||||||   || ||||||||||||||||||||||
seq2  T--GCTGTGTGATCATGCATAG--CACCTTGTCACCTTCCAGGAAATGAC  92

seq1  TGGAAGGCTGGTGTAATGAACTAGAGATCACTCATTTCCATTCCTTCTTA  150
      ||  | ||||||||||||||||||||||||||||||||||| | ||||||
seq2  TG--AAGCTGGTGTAATGAACTAGAGATCACTCATTTCCATCCTTTCTTA  140

seq1  TGGACACTGGGACAGAAGGGGAGTGGGAAGGGGAGGGCAAGTTGCCAGAT  200
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TGGACACTGGGACAGAAGGGGAGTGAGAAGGGGAGGGCAAGTTGCCAGAT  190

seq1  TATCACAGAAGAAAGATGTTAGATAAGACACCATGAGAAATGTTCTCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACAGAAGAAAGATGTTAGATAAGACACCATGAGAAATGTTCTCTTG  240

seq1  ATTCCTACAATGGGCCATACACATAGCTCAATGAG-TTCTTGCCTAGCAT  299
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ATTCCTACAATGGGCCATACACATAGCTCAATGAGTTTCTTGCCTAGCAT  290

seq1  GCATGAAGCTGTGATTTCACTCTCAACTTCAGAGGCAAAGACTTAAATGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAAGCTGTGATTTCACTCTCAACTTCAGAGGCAAAGACTTAAATGT  340

seq1  CCCTATACATGTGTTCTGTGACTCTGCTTCTTCTTGGGCAGCCTGTGTAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATACATGTGTTCTGTGACTCTGCTTCTTCTTGGGCAGCCTGTGTAC  390

seq1  AGCCTTTAGTCCTTTGTCAGGTGTAGTCACATGTACTTCATATTAATGTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTTAGTCCTTTGTCAGGTGTAGTCACATGTACTTCATATTAATGTC  440

seq1  AGTGACTCTAATTTACAGAGCTCCTATTGCCCCACAGTCTCACGTCCTCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACTCTAATTTACAGAGCTCCTATTGCCCCACAGTCTCACGTCCTCT  490

seq1  CTCAACAGCTGGGTGTGGGACTCCCACTCTGTAGAAAAGAGGCAGCTGAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACAGCTGGGTGTGGGACTCCCACTCTGTAGAAAAGAGGCAGCTGAG  540

seq1  GCATAGGAGACTAGGTTCCTTGTACCTCTCATCAGTGAATGGCAGGCGTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGGAGACTAGGTTCCTTGTACCTCTCATCAGTGAATGGCAGGCGTG  590

seq1  GGAACAGGGACCAGCTTTCTTGCTTGGTGTTTTTCTATTGTGCTCCTCCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAGGGACCAGCTTTCTTGCTTGGTGTTTTTCTATTGTGCTCCTCCA  640

seq1  GGGCATACAGTGTTTGCCACCCCAGCATTTGAAAGCTAGGCAGTGGCAAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATACAGTGTTTGCCACCCCAGCATTTGAAAGCTAGGCAGTGGCAAG  690

seq1  ACTGACCTCTTAGCCCAAGCTGAGAGGTACCCAGTGACCACTGGGAAGCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACCTCTTAGCCCAAGCTGAGAGGTACCCAGTGACCACTGGGAAGCC  740

seq1  AATGACAGGCAACAGCTTTCTCAGGTGCTTGCCCTTAAACATTAGTGGTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACAGGCAACAGCTTTCTCAGGTGCTTGCCCTTAAACATTAGTGGTT  790

seq1  GAAATAGCAGTAGTTCCACTGTTCCTACTCTTAAGAGGGTGGCACCCAGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGCAGTAGTTCCACTGTTCCTACTCTTAAGAGGGTGGCACCCAGC  840

seq1  ATCCCTCTGCTCTAACCTCTATTTGCCCCTGTCTGACTGGGGATGACACT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTCTGCTCTAACCTCTATTTGCCCCTGTCTGACTGGGGATGACACT  890

seq1  TATATTGCAGTTCCTCATTATTACCTTATTTTGTGGTGTGACCTAGGTGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTGCAGTTCCTCATTATTACCTTATTTTGTGGTGTGACCTAGGTGG  940

seq1  CAGTTCTGTGAAAGCTCTTCTACAGCCACAGGGGTGGGTGGTAGAGGGGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTGTGAAAGCTCTTCTACAGCCACAGGGGTGGGTGGTAGAGGGGA  990

seq1  ACATAAATCAGTTAATGTAGCTCAGTGCACCATGTAGAAGAGAGTCATTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAATCAGTTAATGTAGCTCAGTGCACCATGTAGAAGAGAGTCATTC  1040

seq1  CTAACTCTGTCCTCTGTGTTTGTTGAATTC  1079
      ||||||||||||||||||||||||||||||
seq2  CTAACTCTGTCCTCTGTGTTTGTTGAATTC  1070


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