BAC Information

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BAC

Clone NameB6Ng01-127C19
Chromosome16 (Build37)
Map Location 43,271,701 - 43,272,239
singlet/doubletsinglet
Overlap genenone
Upstream geneGap43, BC002163
Downstream geneLOC667484, Zbtb20, LOC100043314, Drd3, Qtrtd1, 2610015P09Rik, Zdhhc23, Gramd1c, Atp6v1a, Nat13, Gm608, Sidt1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127C19.bB6Ng01-127C19.g
ACCDH929359DH929360
length1,249533
definitionDH929359|Mus musculus domesticus DNA, BAC clone: B6Ng01-127C19, 5' end.DH929360|Mus musculus domesticus DNA, BAC clone: B6Ng01-127C19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagcccccttttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatgggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatgttggtcctgccaatccatgagcatgggagatctttccatct
tctgagatcttctttaatttctttcttcagggacttgaagtttttttcat
acagatctttcactttcttcgttagagtcacgccgagatattttatatta
tttgtggctattgagagggtgttgtttccctaattctttcttcagcctgt
tttttcttttgttgtagagaagggccattgacttgtttgagttaattttg
tattccagctacttcaccgaagctgtttatcaggctagagttcttgtggg
aaattttaagggtcacttatatataccatcaatatcatcgcaaaaggaga
aatttgccttcctcttccaattgataccctgaatccttgtgtcaatgacc
tggctaatctctcaggtacgtagtgtaaagggaggattgacaagttatg
atgtgttcagaatggtgacttagaaataaccaataccatcatttatatat
agctagggaacggacaacctcattgtgatgaaaaaaatcaagttgaactt
tgaaaaaatgtgtaagagttgggtggtggtgatgagattcaggtgtgtga
gggtatgagcaagagcacagaagcagaaaactgaaagatgcatttgtagc
aacaagtgaacatgttggcagggattgtataggagacagtactgagagat
cagctgacggtggaaggggaaagggctccgtgaactctatgctgaaagat
ctacttttgtcctgtggaaaaagacatgaattaaagccttgcaaattggg
cagtggcctgatcaaagtcctatcttgttatcaataattagaaactagaa
taaaggaggcacaagcagagcatgcagaatctgccatgataacccagcaa
ttatatgatctgactgatcgggatcaatagcagagtacagtgatgatgat
gatgtatatgtatatgtatatgtatacgtatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_43271701_43272239
seq2: B6Ng01-127C19.g_67_605 (reverse)

seq1  ATATACATATACATATACATATACATATACATCATCATCATCACTGTACT  50
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACGTATACATATACATATACATATACATCATCATCATCACTGTACT  50

seq1  CTGCTATTGATCCCGATCAGTCAGATCATATAATTGCTGGGTTATCATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTATTGATCCCGATCAGTCAGATCATATAATTGCTGGGTTATCATGG  100

seq1  CAGATTCTGCATGCTCTGCTTGTGCCTCCTTTATTCTAGTTTCTAATTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTCTGCATGCTCTGCTTGTGCCTCCTTTATTCTAGTTTCTAATTAT  150

seq1  TGATAACAAGATAGGACTTTGATCAGGCCACTGCCCAATTTGCAAGGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAACAAGATAGGACTTTGATCAGGCCACTGCCCAATTTGCAAGGCTT  200

seq1  TAATTCATGTCTTTTTCCACAGGACAAAAGTAGATCTTTCAGCATAGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCATGTCTTTTTCCACAGGACAAAAGTAGATCTTTCAGCATAGAGT  250

seq1  TCACGGAGCCCTTTCCCCTTCCACCGTCAGCTGATCTCTCAGTACTGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGGAGCCCTTTCCCCTTCCACCGTCAGCTGATCTCTCAGTACTGTCT  300

seq1  CCTATACAATCCCTGCCAACATGTTCACTTGTTGCTACAAATGCATCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATACAATCCCTGCCAACATGTTCACTTGTTGCTACAAATGCATCTTT  350

seq1  CAGTTTTCTGCTTCTGTGCTCTTGCTCATACCCTCACACACCTGAATCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTCTGCTTCTGTGCTCTTGCTCATACCCTCACACACCTGAATCTC  400

seq1  ATCACCACCACCCAACTCTTACACATTTTTTCAAAGTTCAACTTGATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCACCACCCAACTCTTACACATTTTTTCAAAGTTCAACTTGATTTT  450

seq1  TTTCATCACAATGAGGTTGTCCGTTCCCTAGCTATATATAAATGATGGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATCACAATGAGGTTGTCCGTTCCCTAGCTATATATAAATGATGGTA  500

seq1  TTGGTTATTTCTAAGTCACCATTCTGAACACATGAATTC  539
      |||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTATTTCTAAGTCACCATTCTGAACACATGAATTC  539