BAC Information

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BAC

Clone NameB6Ng01-127O19
Chromosome16 (Build37)
Map Location 53,108,132 - 53,108,991
singlet/doubletsinglet
Overlap genenone
Upstream geneCblb, Alcam, LOC100043430, LOC667895
Downstream geneLOC433027
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127O19.g
ACCDH929912
length899
definitionDH929912|Mus musculus domesticus DNA, BAC clone: B6Ng01-127O19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcgccagtcttaacttcaaaaagatactctgtgtgggtggggg
ggaagggcttgtttcagagaacagagtgtgagaggtggcaaacaataaag
gcgatcagtgtcaggcaagttgacagtacataaaagaagaattcttgaaa
agaaagcattcttgtgctgatctcgttggtaattattagtagtaatggat
atggaaaattgggtgaaaagtcataaatggagacttaaaatcattgtcag
tccaacaaaacaagggtaattttgagaaaaaccaagtgtggaggaacact
tggagactcttctaatgtggaattaagaacatgaggttctaaagaaaagt
ggcaggggtaggaaggatgggcacagacagtgaacactacatttgactat
cacataattcctagtaaactcctccataagccaaaataaaacttttctaa
cctgaagcatttaatgttttcatttacttcatttcctctcttgtgtcacc
actaattgaatctgggagacttctattcttttctgcttagaagagttagt
tcagtactataatatccaatttaagtgataaaccatctatgtaacactcc
aaatatttaaaaattgttaagcctatcatggaacaatagaaatatataaa
catcctaatatgaacagaagctaagaaattaatgcaatacaagagagaaa
gaatgtgaagataaggttaatgtagtttttaaaaaatatagtgtaattgt
ttcacttttacttaacgtattaaaagtggttaaatattacttttaattta
acattgagaagagttcccatacagaattttacaatgatggcattgaggga
ccagtcagatgaactgaagcctaaataaactggcgatcagggaaataaa
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_53108132_53108991
seq2: B6Ng01-127O19.g_118_966 (reverse)

seq1  TTTATTTTCCCCTGGATCGCCATGTTTTAATTTAGGGCTTTCAGTTCATT  50
      |||||||  |||| |||||||| ||||  |||||||   ||||||||| |
seq2  TTTATTT--CCCT-GATCGCCA-GTTT--ATTTAGG--CTTCAGTTCA-T  41

seq1  CTGACTTGGTTCCCTCAATGCCATCATTGTAAATTTCTGTTATTGGACTT  100
      ||||||  | ||||||||||||||||||||||| ||||| ||| |||  |
seq2  CTGACT--GGTCCCTCAATGCCATCATTGTAAAATTCTG-TATGGGAACT  88

seq1  CTTCTCATTGTTATATTAAAAGTAATATTTTAACACTTTT-ATACATTAG  149
      ||||||| ||||| |||||||||||||||| | ||||||| |||| ||| 
seq2  CTTCTCAATGTTAAATTAAAAGTAATATTTAACCACTTTTAATACGTTAA  138

seq1  GTAAAAGTGAAAC-ATTACACTATATTTTTTAAAAACTACATTAACCTTA  198
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTAAAAGTGAAACAATTACACTATATTTTTTAAAAACTACATTAACCTTA  188

seq1  TCTTCACATTCTTTCTCTCTTTGTATTGCATTAATTTCTTAGCTTCTGTT  248
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TCTTCACATTCTTTCTCTC-TTGTATTGCATTAATTTCTTAGCTTCTGTT  237

seq1  CATATTAGGATGTTTATATATTTCTATTGTTCCATGATAGGCTTAACAAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTAGGATGTTTATATATTTCTATTGTTCCATGATAGGCTTAACAAT  287

seq1  TTTTAAATATTTGGAGTGTTACATAGATGGTTTATCACTTAAATTGGATA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATATTTGGAGTGTTACATAGATGGTTTATCACTTAAATTGGATA  337

seq1  TTATAGTACTGAACTAACTCTTCTAAGCAGAAAAGAATAGAAGTCTCCCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGTACTGAACTAACTCTTCTAAGCAGAAAAGAATAGAAGTCTCCCA  387

seq1  GATTCAATTAGTGGTGACACAAGAGAGGAAATGAAGTAAATGAAAACATT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAATTAGTGGTGACACAAGAGAGGAAATGAAGTAAATGAAAACATT  437

seq1  AAATGCTTCAGGTTAGAAAAGTTTTATTTTGGCTTATGGAGGAGTTTACT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTTCAGGTTAGAAAAGTTTTATTTTGGCTTATGGAGGAGTTTACT  487

seq1  AGGAATTATGTGATAGTCAAATGTAGTGTTCACTGTCTGTGCCCATCCTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATTATGTGATAGTCAAATGTAGTGTTCACTGTCTGTGCCCATCCTT  537

seq1  CCTACCCCTGCCACTTTTCTTTAGAACCTCATGTTCTTAATTCCACATTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCCCTGCCACTTTTCTTTAGAACCTCATGTTCTTAATTCCACATTA  587

seq1  GAAGAGTCTCCAAGTGTTCCTCCACACTTGGTTTTTCTCAAAATTACCCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGTCTCCAAGTGTTCCTCCACACTTGGTTTTTCTCAAAATTACCCT  637

seq1  TGTTTTGTTGGACTGACAATGATTTTAAGTCTCCATTTATGACTTTTCAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTTGGACTGACAATGATTTTAAGTCTCCATTTATGACTTTTCAC  687

seq1  CCAATTTTCCATATCCATTACTACTAATAATTACCAACGAGATCAGCACA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTTTCCATATCCATTACTACTAATAATTACCAACGAGATCAGCACA  737

seq1  AGAATGCTTTCTTTTCAAGAATTCTTCTTTTATGTACTGTCAACTTGCCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGCTTTCTTTTCAAGAATTCTTCTTTTATGTACTGTCAACTTGCCT  787

seq1  GACACTGATCGCCTTTATTGTTTGCCACCTCTCACACTCTGTTCTCTGAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGATCGCCTTTATTGTTTGCCACCTCTCACACTCTGTTCTCTGAA  837

seq1  ACAAGCGCTTCC  860
      |||||| |||||
seq2  ACAAGCCCTTCC  849