BAC Information

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BAC

Clone NameB6Ng01-128D12
Chromosome16 (Build37)
Map Location 94,430,940 - 94,606,725
singlet/doubletdoublet
Overlap geneHlcs, LOC622832, LOC100040857, Dscr6, LOC545178, Pigp, Ttc3
Upstream geneSetd4, LOC670912, Cbr1, EG435489, Cbr3, Dopey2, Morc3, Chaf1b, Cldn14, Sim2
Downstream geneDscr3, Dyrk1a, Kcnj6, LOC666201, Kcnj15, Erg
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128D12.bB6Ng01-128D12.g
ACCDH930131DH930132
length1,140954
definitionDH930131|Mus musculus domesticus DNA, BAC clone: B6Ng01-128D12, 5' end.DH930132|Mus musculus domesticus DNA, BAC clone: B6Ng01-128D12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,605,582 - 94,606,725)(94,430,940 - 94,431,909)
sequence
gaattcattaaaggcttgtaattaatcatttatacccaaatcccaagtct
ttacttttctatctgattaagcaaagataacattctagaaggaggcacga
gcctcccactgtacttggtatttctcagtactgtacaacatgctaacaca
gttcttaaacgactattattatatagtaacttacatggcttctacacagg
ggtgcaatcttgatattatagaactgtgttgatgttgaaaaagaagtggc
cagaagatgtacagcttaatggcatcacagtaatcttgcaggatggagag
tggcttactgcaccagatattgcagatgtcatattcttaattaaattaaa
aagtttaaaattagcattttcaaatgaatctataccattaatagagaaaa
agtaacaataggtataaaaagggtaaaaattgaaggagtaaaatattcaa
ctattagatattaagaaaatttaggaactggctgtagctttacaaaagat
tagtttctagtctgagacaagagtctcagcatgctgatcaaagctggcct
ggagcttctaatccttctgcctcaacctccttcccaaatgctgggattac
aggcctatataaccaaatcaagctaaaaatacatattaaaagataaattt
gttatgttggtatgactggatggatagacctcccttaatagtcttgcaac
aaattagcattaaagtattaatatactcacctaaatttttctcactttgg
gcataatctttatattgcataccctaaaagaagaaaattattctgatttt
tatctggtaaaaggtgaaagtatgtatggtttgtggtttcggaactcatc
tcgggctttttcattggattgctctgagtttgttcctttttctcaggagc
ctggttgatctccagtctaagtaactagttctcaccactctggcgacaca
gcccttccctttctgcaatcatctcttcagagcacacgtacttgtccttt
tcataccatatggcacaaaactgctctaaggtagagttcacaagcctaac
tcatccacgcctcataagtagctgggttactcgacataatcgtcagggtt
aagtcaggaacagatacgactatccctctaagggtatctt
gaattcactactctgttatctaccttcaaaatacacaagcaaacccctga
agcctgccagggcccactcttctgttcgccccagaatcacaccctaactc
tgcttgatgatcttaagccctgctttccaattgcccatattacaaatact
tattttaaaaagtgctttaaatgatcttatctccattctgtcaattttta
accgagcctcgatttggttctaatcattaatagcaaataactgcttaaag
catataaatgtttccaattttgattaaaatgttaaccaaaacttgaaaga
cactggaaatcatatttttatatatattttttaaaactctgagaatctgt
tactggtctgtgtgtgtgcatgtcgtggtatctgggtgtgtgtgcgtgct
atgtgtgcctgttgactctgtgtgtgtgtgtgtgtgtgcctgctgactgt
gtgtgcctgctaactgtgtgtgcctgctgagtcatctttccagcctggag
atctatttctgaattagacaaaagggcctttagataattatagccatgga
ggaatgctactgttgccaggaagagagagagagagagacatcatcaggac
tgtcccatttttgttagactggcaaatcactcgccatccttgcctttgtg
ggaagacaggttttattatggcaacacttctcattttctaaaccccttcc
aacgtacctacctaaaccgcaccctcctctgtcacttgagtctctctaaa
ggatgtgtcagccacagattgtcagatcctccttcgatttgtcctaaagc
aaaagagacctagctgagagcaagggaattgtcactcagggtcacttcca
gggccttttctatgggacactagaggtggctcattcagagaagctggtgc
tacagattaaaaggtaaagaggcaccgatgcagggtgaatggggactggg
cggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_94605582_94606725
seq2: B6Ng01-128D12.b_48_1187 (reverse)

seq1  AAGATTACCCTTATGAGGATGACTGTATCTGTACTCCTGACTTTACCACT  50
      |||| ||||||||   ||||    ||||||||  ||||||||| ||| ||
seq2  AAGA-TACCCTTAGAGGGATAGTCGTATCTGT--TCCTGACTTAACC-CT  46

seq1  GACGATTATGTTCGAGTAACCCAGCTTTAC-TATGAAGGCGTGG-TGAG-  97
      |||||||||| ||||||||||||||  ||| |||| |||||||| |||| 
seq2  GACGATTATG-TCGAGTAACCCAGC--TACTTATG-AGGCGTGGATGAGT  92

seq1  TAGGCTTGTGAACTCTACTTTAGAGCAGTTTTTGTGGCATAT-GTATTGA  146
      |||||||||||||||||| ||||||||| ||||||| ||||| ||||  |
seq2  TAGGCTTGTGAACTCTACCTTAGAGCAG-TTTTGTGCCATATGGTATGAA  141

seq1  CAGGAC-AGTACGTGTGCTTCTGAAGAGATGATTGCAG-AAGGGAAGGGC  194
       ||||| ||||||||||| ||||||||||||||||||| |||||||||||
seq2  AAGGACAAGTACGTGTGC-TCTGAAGAGATGATTGCAGAAAGGGAAGGGC  190

seq1  TGTGTCGCCAGAGTGGTGAGAACTAGTTACTTAGACTGGAGATCAACCAG  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCGCCAGAGTGGTGAGAACTAGTTACTTAGACTGGAGATCAACCAG  240

seq1  GCTCCTGAGGAAAAGGAACAAACTCAGAGCAATCCAATGAGAAAGCCCGA  294
      ||||||||| |||||||||||||||||||||||||||||| |||||||||
seq2  GCTCCTGAGAAAAAGGAACAAACTCAGAGCAATCCAATGAAAAAGCCCGA  290

seq1  GATGAGTTCCGAAACCACAAACCATACATACTTTCACCTTTTACCAGATA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGTTCCGAAACCACAAACCATACATACTTTCACCTTTTACCAGATA  340

seq1  AAAATCAGAATAATTTTCTTCTTTTAGGGTATGCAATATAAAGATTATGC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAGAATAATTTTCTTCTTTTAGGGTATGCAATATAAAGATTATGC  390

seq1  CCAAAGTGAGAAAAATTTAGGTGAGTATATTAATACTTTAATGCTAATTT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGTGAGAAAAATTTAGGTGAGTATATTAATACTTTAATGCTAATTT  440

seq1  GTTGCAAGACTATTAAGGGAGGTCTATCCATCCAGTCATACCAACATAAC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCAAGACTATTAAGGGAGGTCTATCCATCCAGTCATACCAACATAAC  490

seq1  AAATTTATCTTTTAATATGTATTTTTAGCTTGATTTGGTTATATAGGCCT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTATCTTTTAATATGTATTTTTAGCTTGATTTGGTTATATAGGCCT  540

seq1  GTAATCCCAGCATTTGGGAAGGAGGTTGAGGCAGAAGGATTAGAAGCTCC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCCCAGCATTTGGGAAGGAGGTTGAGGCAGAAGGATTAGAAGCTCC  590

seq1  AGGCCAGCTTTGATCAGCATGCTGAGACTCTTGTCTCAGACTAGAAACTA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGCTTTGATCAGCATGCTGAGACTCTTGTCTCAGACTAGAAACTA  640

seq1  ATCTTTTGTAAAGCTACAGCCAGTTCCTAAATTTTCTTAATATCTAATAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTGTAAAGCTACAGCCAGTTCCTAAATTTTCTTAATATCTAATAG  690

seq1  TTGAATATTTTACTCCTTCAATTTTTACCCTTTTTATACCTATTGTTACT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATATTTTACTCCTTCAATTTTTACCCTTTTTATACCTATTGTTACT  740

seq1  TTTTCTCTATTAATGGTATAGATTCATTTGAAAATGCTAATTTTAAACTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCTATTAATGGTATAGATTCATTTGAAAATGCTAATTTTAAACTT  790

seq1  TTTAATTTAATTAAGAATATGACATCTGCAATATCTGGTGCAGTAAGCCA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTAATTAAGAATATGACATCTGCAATATCTGGTGCAGTAAGCCA  840

seq1  CTCTCCATCCTGCAAGATTACTGTGATGCCATTAAGCTGTACATCTTCTG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCATCCTGCAAGATTACTGTGATGCCATTAAGCTGTACATCTTCTG  890

seq1  GCCACTTCTTTTTCAACATCAACACAGTTCTATAATATCAAGATTGCACC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTTCTTTTTCAACATCAACACAGTTCTATAATATCAAGATTGCACC  940

seq1  CCTGTGTAGAAGCCATGTAAGTTACTATATAATAATAGTCGTTTAAGAAC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTAGAAGCCATGTAAGTTACTATATAATAATAGTCGTTTAAGAAC  990

seq1  TGTGTTAGCATGTTGTACAGTACTGAGAAATACCAAGTACAGTGGGAGGC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTAGCATGTTGTACAGTACTGAGAAATACCAAGTACAGTGGGAGGC  1040

seq1  TCGTGCCTCCTTCTAGAATGTTATCTTTGCTTAATCAGATAGAAAAGTAA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGCCTCCTTCTAGAATGTTATCTTTGCTTAATCAGATAGAAAAGTAA  1090

seq1  AGACTTGGGATTTGGGTATAAATGATTAATTACAAGCCTTTAATGAATTC  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGGGATTTGGGTATAAATGATTAATTACAAGCCTTTAATGAATTC  1140

seq1: chr16_94430940_94431909
seq2: B6Ng01-128D12.g_68_1021

seq1  GAATTCACTACTCTGTTATCTACCTTCAAAATACACAAGCAAACCCCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTACTCTGTTATCTACCTTCAAAATACACAAGCAAACCCCTGA  50

seq1  AGCCTGCCAGGGCCCACTCTTCTGTTCGCCCCAGAATCACACCCTAACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGCCAGGGCCCACTCTTCTGTTCGCCCCAGAATCACACCCTAACTC  100

seq1  TGCTTGATGATCTTAAGCCCTGCTTTCCAATTGCCCATATTACAAATACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGATGATCTTAAGCCCTGCTTTCCAATTGCCCATATTACAAATACT  150

seq1  TATTTTAAAAAGTGCTTTAAATGATCTTATCTCCATTCTGTCAATTTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAAAAAGTGCTTTAAATGATCTTATCTCCATTCTGTCAATTTTTA  200

seq1  ACCGAGCCTCGATTTGGTTCTAATCATTAATAGCAAATAACTGCTTAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGAGCCTCGATTTGGTTCTAATCATTAATAGCAAATAACTGCTTAAAG  250

seq1  CATATAAATGTTTCCAATTTTGATTAAAATGTTAACCAAAACTTGAAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAAATGTTTCCAATTTTGATTAAAATGTTAACCAAAACTTGAAAGA  300

seq1  CACTGGAAATCATATTTTTATATATATTTTTTAAAACTCTGAGAATCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGAAATCATATTTTTATATATATTTTTTAAAACTCTGAGAATCTGT  350

seq1  TACTGGTCTGTGTGTGTGCATGTCGTGGTATCTGGGTGTGTGTGCGTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGTCTGTGTGTGTGCATGTCGTGGTATCTGGGTGTGTGTGCGTGCT  400

seq1  ATGTGTGCCTGTTGACTCTGTGTGTGTGTGTGTGTGTGCCTGCTGACTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGCCTGTTGACTCTGTGTGTGTGTGTGTGTGTGCCTGCTGACTGT  450

seq1  GTGTGCCTGCTAACTGTGTGTGCCTGCTGAGTCATCTTTCCAGCCTGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCCTGCTAACTGTGTGTGCCTGCTGAGTCATCTTTCCAGCCTGGAG  500

seq1  ATCTATTTCTGAATTAGACAAAAGGGCCTTTAGATAATTATAGCCATGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATTTCTGAATTAGACAAAAGGGCCTTTAGATAATTATAGCCATGGA  550

seq1  GGAATGCTACTGTTGCCAGGAAGAGAGAGAGAGAGAGACATCATCAGGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGCTACTGTTGCCAGGAAGAGAGAGAGAGAGAGACATCATCAGGAC  600

seq1  TGTCCCA-TTTTGTTAGACTGGCAAATCACTCGCCATCCTTGCCTTTGTG  649
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCATTTTTGTTAGACTGGCAAATCACTCGCCATCCTTGCCTTTGTG  650

seq1  GGAAGACAGGTTTTATTATGGCAACACTTCTCCATTTTCTAAACCCCTTC  699
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GGAAGACAGGTTTTATTATGGCAACACTTCT-CATTTTCTAAACCCCTTC  699

seq1  CAACGTACCTACCTAAACCGCACCCTCCTCTGTCACTTGAGTCTCTCTAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACGTACCTACCTAAACCGCACCCTCCTCTGTCACTTGAGTCTCTCTAA  749

seq1  AGGATGTGTCAGGCCACAGATTGTCCAGATCCTCCTTCGATTTGTCCTAG  799
      ||||||||||| |||||||||||| |||||||||||||||||||||||| 
seq2  AGGATGTGTCA-GCCACAGATTGT-CAGATCCTCCTTCGATTTGTCCTA-  796

seq1  AAGCAAAAGGAGACCCTAGCTGAGGAGCAAAGGGAATTGTCACTCAGGGT  849
      |||||||| |||| ||||||||| |||| |||||||||||||||||||||
seq2  AAGCAAAA-GAGA-CCTAGCTGA-GAGC-AAGGGAATTGTCACTCAGGGT  842

seq1  CACCTCCCAGGGCCTTTTCTATGGGACACCTAGAGGTGGCTCCATTCAGA  899
      || || |||||||||||||||||||||| |||||||||||| ||||||||
seq2  CA-CTTCCAGGGCCTTTTCTATGGGACA-CTAGAGGTGGCT-CATTCAGA  889

seq1  GAAGCTGGGTGCTACAAGATTAGAAGGGTAAAGAGGCACCGATGCAGGGG  949
      |||||| |||||||| |||||| || |||||||||||||||||||| |||
seq2  GAAGCT-GGTGCTAC-AGATTA-AAAGGTAAAGAGGCACCGATGCA-GGG  935

seq1  TGAATGGGGACCTGGGGCGGG  970
      |||||||||||   |||||||
seq2  TGAATGGGGAC--TGGGCGGG  954