BAC Information

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BAC

Clone NameB6Ng01-129A07
Chromosome16 (Build37)
Map Location 21,969,255 - 22,112,945
singlet/doubletdoublet
Overlap geneLiph, Senp2, EG239760, Igf2bp2
Upstream geneLOC625123, LOC676915, 2310042E22Rik, Ephb3, 6430590I03Rik, Vps8, 2510009E07Rik, Ehhadh, LOC100043489, LOC546659, Map3k13, LOC624037, Tmem41a
Downstream geneEG545152, EG666421, Sfrs10, LOC100043507, Etv5, Dgkg, LOC671242, LOC666459, Crygs, Tbccd1, Dnajb11, Ahsg, Fetub, Hrg, Kng2, LOC624311, LOC666486, LOC666489, Kng1, LOC666493, Eif4a2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129A07.bB6Ng01-129A07.g
ACCDH930714DH930715
length7861,140
definitionDH930714|Mus musculus domesticus DNA, BAC clone: B6Ng01-129A07, 5' end.DH930715|Mus musculus domesticus DNA, BAC clone: B6Ng01-129A07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,969,255 - 21,970,040)(22,111,799 - 22,112,945)
sequence
gaattcatgggcagtgctagtcaaaaggtcaccaaaaggtgattttccat
caaaatcattatccaaagaacaactcagggctggcaagatgactgaacag
gcaaagacacttgtcatcaaggctgatggcttgaattccaacactgggtc
ccacatggtggaaaaagataattgtgctctacaggctattttctaacatc
tgggcacacatgaccatacacatacatttttttaaaaaaaatgtaataga
aatctaaattagtcattattactttttttccttatctattatttagaggg
agagtgaaacaaaattggccttggtcatggatttgccttattatttggga
aattgttaacagaaacaaaatttgaaaggccaatgtaaagagccattatt
aacatatccactctgataaacctattctgttacctaacccccgaccccta
tacatagtcctgggttgttcaagacaggatctcaatgtgttatccaaact
agccccaaccccatagtcctcctgcctctgcctcttgagtgcaagaatcc
caggagtatactaacacatctggccagcttgtgagctccccaaaaaactg
accattccccattaaatatcaacattagttctcatcaagagctactttct
agggctggagagtcgtctcaatggctaacagcacttcactgttcttgctg
tccttgccaaggacctgagtttagttcctaacacccatggcaggcaactc
acaactgcctgcacctccagctggggggggggggca
gaattcaaggtgaattcacttcagtctctgctccatttttgttcctgcat
ttcctttagacaggaacagttctgggtcagaaattttgaagatgggtgga
tggcctcatctctctacttgggggtcatgcctatctactggaggtggtct
ctttaattcagcagtgtaaattctttgataaaatcaagtgtattaagtca
ttgtcactttagccttgtcatccagtagttgtgtcctttcacatgctcag
tggaggcaggaactcttgagttttctatattgagtcagctagtgaccgag
agcccaggcatgctgctttgggtatactttcagctttctgtaggtctgta
tacttgtcctggtttatctcaggaacaggttgcttccctctgaactaaac
tagtttattttcttggcttgctatcaggaacctttggacataccatggct
tttcattgcagtagagcatttgccttttagtggaagcccacatacagact
tactctgcatctgatctctggctgggtaggaaaaggacttgaagattttc
cctgagacagaagagatgcccacaagaaataggcttgccgtaaggctgcg
gggcctgggaggaggtagccagccaggagtcaccataaagtcggaggcta
gcctgtcagagggaggacctctggccagtcttcattcactccttacatct
gtctccatgctaatagcttgtttgaactctggagttcattatcattgcga
gtgtctaaatagtggggattatgcattttaactccctattcaaccaaaga
cctcagcttcttagtgtttttttttttcctctatgatctatcttaaagtt
cagacaacttataaatagaccaataagacaattagaccaaccctggactt
gatatataaatgtttagagtaaattgctgatctttggtttggcaagtaac
ttcatgggtgaagtgccttgagaacctgagttgagccctatagcctgtgt
gctggagaaagcatagactccagttccctgggtaatcctcagacctaaca
tcggtctgcaccccaagtacaggtgtgactgcccaatataagcaatgaaa
attccatgactcagctggggaaaggatatttcttaggtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_21969255_21970040
seq2: B6Ng01-129A07.b_50_835

seq1  GAATTCATGGGCAGTGCTAGTCAAAAGGTCACCAAAAGGTGATTTTCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGGCAGTGCTAGTCAAAAGGTCACCAAAAGGTGATTTTCCAT  50

seq1  CAAAATCATTATCCAAAGAACAACTCAGGGCTGGCAAGATGACTGAACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATCATTATCCAAAGAACAACTCAGGGCTGGCAAGATGACTGAACAG  100

seq1  GCAAAGACACTTGTCATCAAGGCTGATGGCTTGAATTCCAACACTGGGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGACACTTGTCATCAAGGCTGATGGCTTGAATTCCAACACTGGGTC  150

seq1  CCACATGGTGGAAAAAGATAATTGTGCTCTACAGGCTATTTTCTAACATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGGTGGAAAAAGATAATTGTGCTCTACAGGCTATTTTCTAACATC  200

seq1  TGGGCACACATGACCATACACATACATTTTTTTAAAAAAAATGTAATAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCACACATGACCATACACATACATTTTTTTAAAAAAAATGTAATAGA  250

seq1  AATCTAAATTAGTCATTATTACTTTTTTTCCTTATCTATTATTTAGAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAAATTAGTCATTATTACTTTTTTTCCTTATCTATTATTTAGAGGG  300

seq1  AGAGTGAAACAAAATTGGCCTTGGTCATGGATTTGCCTTATTATTTGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGAAACAAAATTGGCCTTGGTCATGGATTTGCCTTATTATTTGGGA  350

seq1  AATTGTTAACAGAAACAAAATTTGAAAGGCCAATGTAAAGAGCCATTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTTAACAGAAACAAAATTTGAAAGGCCAATGTAAAGAGCCATTATT  400

seq1  AACATATCCACTCTGATAAACCTATTCTGTTACCTAACCCCCGACCCCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATCCACTCTGATAAACCTATTCTGTTACCTAACCCCCGACCCCTA  450

seq1  TACATAGTCCTGGGTTGTTCAAGACAGGATCTCAATGTGTTATCCAAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAGTCCTGGGTTGTTCAAGACAGGATCTCAATGTGTTATCCAAACT  500

seq1  AGCCCCAACCCCATAGTCCTCCTGCCTCTGCCTCTTGAGTGCAAGAATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCAACCCCATAGTCCTCCTGCCTCTGCCTCTTGAGTGCAAGAATCC  550

seq1  CAGGAGTATACTAACACATCTGGCCAGCTTGTGAGCTCCCCAAAAAACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGTATACTAACACATCTGGCCAGCTTGTGAGCTCCCCAAAAAACTG  600

seq1  ACCATTCCCCATTAAATATCAACATTAGTTCTCATCAAGAGCTACTTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTCCCCATTAAATATCAACATTAGTTCTCATCAAGAGCTACTTTCT  650

seq1  AGGGCTGGAGAGTCGTCTCAATGGCTAACAGCACTTCACTGTTCTTGCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTGGAGAGTCGTCTCAATGGCTAACAGCACTTCACTGTTCTTGCTG  700

seq1  TCCTTGCCAAGGACCTGAGTTTAGTTCCTAACACCCATGGCAGGCAACTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGCCAAGGACCTGAGTTTAGTTCCTAACACCCATGGCAGGCAACTC  750

seq1  ACAACTGCCTGCACCTCCAGCTGGGGGGGGGGGGCA  786
      ||||||||||||||||||||||||||||||||||||
seq2  ACAACTGCCTGCACCTCCAGCTGGGGGGGGGGGGCA  786

seq1: chr16_22111799_22112945
seq2: B6Ng01-129A07.g_70_1209 (reverse)

seq1  TAACCTAAGAACTTCTCTTTCCCCAGCCTGAGCTCATTGAGAAATTTATC  50
      ||||||||||| |   |||||||||| ||||| ||||   | ||||| ||
seq2  TAACCTAAGAAATATCCTTTCCCCAG-CTGAG-TCAT---GGAATTT-TC  44

seq1  ATTGCTTTATATGGGCCTGTGCACACCTGT-CCTGTGGTGCAGGCCCGAT  99
      ||||| |||||| || | || ||||||||| | || |||||| | |||||
seq2  ATTGC-TTATATTGGGCAGT-CACACCTGTACTTGGGGTGCA-GACCGAT  91

seq1  GGTTAGGTCTGAGGA-TACCCAGGGAACTGGGAGTCTATGCTTTCCTTCC  148
       |||||||||||||| ||||||||||||| |||||||||||||||  |||
seq2  -GTTAGGTCTGAGGATTACCCAGGGAACT-GGAGTCTATGCTTTC--TCC  137

seq1  AGCACACAGGCTATAGGGCTCAAACTCAGG-TCTCCAGGCACCTTCACCC  197
      ||||||||||||||||||||| |||||||| |||| ||||| ||||||||
seq2  AGCACACAGGCTATAGGGCTC-AACTCAGGTTCTCAAGGCA-CTTCACCC  185

seq1  ACTGAGCTATCTTGCCAAACC-AAGATCAGCAATTTACTCTAAACATTTA  246
      | |||  |  ||||||||||| ||||||||||||||||||||||||||||
seq2  A-TGAAGTTACTTGCCAAACCAAAGATCAGCAATTTACTCTAAACATTTA  234

seq1  TATATCAAGTCCA-GGTTGGTCT-ATTGTC-TATTGGTCTATTTATGAGT  293
      ||||||||||||| ||||||||| |||||| ||||||||||||||| |||
seq2  TATATCAAGTCCAGGGTTGGTCTAATTGTCTTATTGGTCTATTTATAAGT  284

seq1  TGTCTGAAC-TTAAGATAGATCATAGAGGAAAAAAAAAAACACTAAGAAG  342
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGAACTTTAAGATAGATCATAGAGGAAAAAAAAAAACACTAAGAAG  334

seq1  CTGAGGTCCTTGGTTGAATAGGGAGTT-AAATGCATAATCCCCACTATTT  391
      |||||||| |||||||||||||||||| ||||||||||||||||||||||
seq2  CTGAGGTCTTTGGTTGAATAGGGAGTTAAAATGCATAATCCCCACTATTT  384

seq1  AGACACTCGCAATGATAATGAACTCCAGAGTTCAAACAAGCTATTAGCAT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACTCGCAATGATAATGAACTCCAGAGTTCAAACAAGCTATTAGCAT  434

seq1  GGAGACAGATGTAAGGAGTGAATGAAGACTGGCCAGAGGTCCTCCCTCTG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACAGATGTAAGGAGTGAATGAAGACTGGCCAGAGGTCCTCCCTCTG  484

seq1  ACAGGCTAGCCTCCGACTTTATGGTGACTCCTGGCTGGCTACCTCCTCCC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCTAGCCTCCGACTTTATGGTGACTCCTGGCTGGCTACCTCCTCCC  534

seq1  AGGCCCCGCAGCCTTACGGCAAGCCTATTTCTTGTGGGCATCTCTTCTGT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCCGCAGCCTTACGGCAAGCCTATTTCTTGTGGGCATCTCTTCTGT  584

seq1  CTCAGGGAAAATCTTCAAGTCCTTTTCCTACCCAGCCAGAGATCAGATGC  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGGAAAATCTTCAAGTCCTTTTCCTACCCAGCCAGAGATCAGATGC  634

seq1  AGAGTAAGTCTGTATGTGGGCTTCCACTAAAAGGCAAATGCTCTACTGCA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAAGTCTGTATGTGGGCTTCCACTAAAAGGCAAATGCTCTACTGCA  684

seq1  ATGAAAAGCCATGGTATGTCCAAAGGTTCCTGATAGCAAGCCAAGAAAAT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAGCCATGGTATGTCCAAAGGTTCCTGATAGCAAGCCAAGAAAAT  734

seq1  AAACTAGTTTAGTTCAGAGGGAAGCAACCTGTTCCTGAGATAAACCAGGA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAGTTTAGTTCAGAGGGAAGCAACCTGTTCCTGAGATAAACCAGGA  784

seq1  CAAGTATACAGACCTACAGAAAGCTGAAAGTATACCCAAAGCAGCATGCC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTATACAGACCTACAGAAAGCTGAAAGTATACCCAAAGCAGCATGCC  834

seq1  TGGGCTCTCGGTCACTAGCTGACTCAATATAGAAAACTCAAGAGTTCCTG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTCTCGGTCACTAGCTGACTCAATATAGAAAACTCAAGAGTTCCTG  884

seq1  CCTCCACTGAGCATGTGAAAGGACACAACTACTGGATGACAAGGCTAAAG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCACTGAGCATGTGAAAGGACACAACTACTGGATGACAAGGCTAAAG  934

seq1  TGACAATGACTTAATACACTTGATTTTATCAAAGAATTTACACTGCTGAA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAATGACTTAATACACTTGATTTTATCAAAGAATTTACACTGCTGAA  984

seq1  TTAAAGAGACCACCTCCAGTAGATAGGCATGACCCCCAAGTAGAGAGATG  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAGACCACCTCCAGTAGATAGGCATGACCCCCAAGTAGAGAGATG  1034

seq1  AGGCCATCCACCCATCTTCAAAATTTCTGACCCAGAACTGTTCCTGTCTA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCATCCACCCATCTTCAAAATTTCTGACCCAGAACTGTTCCTGTCTA  1084

seq1  AAGGAAATGCAGGAACAAAAATGGAGCAGAGACTGAAGTGAATTCACCTT  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAATGCAGGAACAAAAATGGAGCAGAGACTGAAGTGAATTCACCTT  1134

seq1  GAATTC  1147
      ||||||
seq2  GAATTC  1140