BAC Information

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BAC

Clone NameB6Ng01-129M11
Chromosome16 (Build37)
Map Location 32,077,114 - 32,176,265
singlet/doubletdoublet
Overlap genePak2, Pigx, 1500031L02Rik, Lrrc33
Upstream geneAI480653, Centb2, Ppp1r2, Apod, 1700007E05Rik, Bdh1, Gm536, Dlg1, Mfi2, LOC677155, Pigz, 0610012G03Rik, Ncbp2, Senp5
Downstream geneBex6, Fbxo45, Wdr53, 2310010M20Rik, Rnf168, LOC666966, Ubxd7, Tm4sf19, 0610012D17Rik, Pcyt1a, Osta, Zdhhc19, LOC385820, Tfrc, Tnk2, ENSMUSG00000075265, LOC672302, Muc4, Muc20, 1700021K19Rik, Fyttd1, Lrch3, EG625660, Iqcg, Rpl35a, Lmln, LOC638791
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129M11.bB6Ng01-129M11.g
ACCDH931274DH931275
length1,15963
definitionDH931274|Mus musculus domesticus DNA, BAC clone: B6Ng01-129M11, 5' end.DH931275|Mus musculus domesticus DNA, BAC clone: B6Ng01-129M11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,077,114 - 32,078,272)(32,176,180 - 32,176,265)
sequence
gaattctctttttaaaaacatgtctgcttgcccaacacaatggtaatctc
actggctaggattctgacgcagatcttaagtccagaagtttgaaacaaac
ctgggtatcatagaaagaggctgtctccaaagaaaaacaaacaaatacct
gcttttggaaacaaatgagatattctgcaggcacaggcttgcaatcccag
ctactagggaggttgagaagaaaaccccagttcaaggcttacctggtagg
gaagagattcaataccagcctgggaaacagtgagactgtctgcacagaga
agagagggctgggcttgtaactcagtgctgcaaagaacacttgcctagca
tcacagggaggtctgcggttcaatccggtacaaggggttaaaaaggagaa
agaaacagcagaaactaacttcaaggtactttttcattccctgacattcc
tccctagtgtcaagacaactcactaacctaagaacaacccacagtaccaa
aggatggcagtacttgatactaatccatttcccccatagcctggcagagg
gaaaggtaataatgtactagtgaaaacaagaagaaaacatttttaatttt
gggcaacctcttttaccaaaacccaaaagttacattttctatctatctaa
gcaacaatataaaattcagtttccctgatgtaaatgtacaatagtgttcc
tggctaattaatctctagaaagacctaaaaagagaggctaccaaatatgt
tggctaacacgtgtaatcccagcacacaaggctgagacaggaagagtgtc
acaacagcctgagctggaatgaggccctgtctaggaaaggcagaggatgg
gtataaaagtatacgaaaaaggctttccttcacacacacacacacacacc
cccaactgatgaactgggggtagagacaaggcaagaatgttctacaaatg
ccacaggagctttcttggcaaagttgacgtgccctaacctgttttaaaaa
ttactacctcactgccttcatcccacctaatttattcatacttatctttt
ggatactctaccaaaaaaaaaataaaaatccccagaggcaatcttgtggt
attatttcaatatcctgcctacttttaagagcggaagtctgtaatacgtc
aggggaaaa
ctacagggaggatgtgggactgggggtaggaggaggtgggaaggggatgt
aaaagggggaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_32077114_32078272
seq2: B6Ng01-129M11.b_47_1205

seq1  GAATTCTCTTTTTAAAAACATGTCTGCTTGCCCAACACAATGGTAATCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTTTAAAAACATGTCTGCTTGCCCAACACAATGGTAATCTC  50

seq1  ACTGGCTAGGATTCTGACGCAGATCTTAAGTCCAGAAGTTTGAAACAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCTAGGATTCTGACGCAGATCTTAAGTCCAGAAGTTTGAAACAAAC  100

seq1  CTGGGTATCATAGAAAGAGGCTGTCTCCAAAGAAAAACAAACAAATACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTATCATAGAAAGAGGCTGTCTCCAAAGAAAAACAAACAAATACCT  150

seq1  GCTTTTGGAAACAAATGAGATATTCTGCAGGCACAGGCTTGCAATCCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGGAAACAAATGAGATATTCTGCAGGCACAGGCTTGCAATCCCAG  200

seq1  CTACTAGGGAGGTTGAGAAGAAAACCCCAGTTCAAGGCTTACCTGGTAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTAGGGAGGTTGAGAAGAAAACCCCAGTTCAAGGCTTACCTGGTAGG  250

seq1  GAAGAGATTCAATACCAGCCTGGGAAACAGTGAGACTGTCTGCACAGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGATTCAATACCAGCCTGGGAAACAGTGAGACTGTCTGCACAGAGA  300

seq1  AGAGAGGGCTGGGCTTGTAACTCAGTGCTGCAAAGAACACTTGCCTAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGGCTGGGCTTGTAACTCAGTGCTGCAAAGAACACTTGCCTAGCA  350

seq1  TCACAGGGAGGTCTGCGGTTCAATCCGGTACAAGGGGTTAAAAAGGAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGGGAGGTCTGCGGTTCAATCCGGTACAAGGGGTTAAAAAGGAGAA  400

seq1  AGAAACAGCAGAAACTAACTTCAAGGTACTTTTTCATTCCCTGACATTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAGCAGAAACTAACTTCAAGGTACTTTTTCATTCCCTGACATTCC  450

seq1  TCCCTAGTGTCAAGACAACTCACTAACCTAAGAACAACCCACAGTACCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAGTGTCAAGACAACTCACTAACCTAAGAACAACCCACAGTACCAA  500

seq1  AGGATGGCAGTACTTGATACTAATCCATTTCCCCCATAGCCTGGCAGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGGCAGTACTTGATACTAATCCATTTCCCCCATAGCCTGGCAGAGG  550

seq1  GAAAGGTAATAATGTACTAGTGAAAACAAGAAGAAAACATTTTTAATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGTAATAATGTACTAGTGAAAACAAGAAGAAAACATTTTTAATTTT  600

seq1  GGGCAACCTCTTTTACCAAAACCCAAAAGTTACATTTTCTATCTATCTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAACCTCTTTTACCAAAACCCAAAAGTTACATTTTCTATCTATCTAA  650

seq1  GCAACAATATAAAATTCAGTTTCCCTGATGTAAATGTACAATAGTGTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACAATATAAAATTCAGTTTCCCTGATGTAAATGTACAATAGTGTTCC  700

seq1  TGGCTAATTAATCTCTAGAAAGACCTAAAAAGAGAGGCTACCAAATATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTAATTAATCTCTAGAAAGACCTAAAAAGAGAGGCTACCAAATATGT  750

seq1  TGGCTAACACGTGTAATCCCAGCACACAAGGCTGAGACAGGAAGAGTGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTAACACGTGTAATCCCAGCACACAAGGCTGAGACAGGAAGAGTGTC  800

seq1  ACAACAGCCTGAGCTGGAATGAGGCCCTGTCTAGGAAAGGCAGAGGATGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAGCCTGAGCTGGAATGAGGCCCTGTCTAGGAAAGGCAGAGGATGG  850

seq1  GTATAAAAGTATACGAAAAAGGC-TTCCTTCACACACACACACACACA-C  898
      ||||||||||||||||||||||| |||||||||||||||||||||||| |
seq2  GTATAAAAGTATACGAAAAAGGCTTTCCTTCACACACACACACACACACC  900

seq1  CCCAACTGAAGAACT-GGGGTAGAGACAA-GCAAGAATGTTCTACAAATG  946
      ||||||||| ||||| ||||||||||||| ||||||||||||||||||||
seq2  CCCAACTGATGAACTGGGGGTAGAGACAAGGCAAGAATGTTCTACAAATG  950

seq1  CCACA-GAGCTT--CTGGCAAAGTTGACGTGCCCTAACCTGTTTTAAAAA  993
      ||||| ||||||   |||||||||||||||||||||||||||||||||||
seq2  CCACAGGAGCTTTCTTGGCAAAGTTGACGTGCCCTAACCTGTTTTAAAAA  1000

seq1  TTACTA-CTCACTGCCTTCATCCCAACCTAATTTTATTCATACTATTCTT  1042
      |||||| ||||||||||||||||| |||||| ||||||||||||  ||||
seq2  TTACTACCTCACTGCCTTCATCCC-ACCTAA-TTTATTCATACTTATCTT  1048

seq1  TTGGATAGCTCTACCAAAAAAAAAAAAAAAAAAATCCCCAGAGCAAATTC  1092
      ||||||| |||||||   |||||||||| ||||||||||||||  || ||
seq2  TTGGATA-CTCTACC---AAAAAAAAAATAAAAATCCCCAGAGGCAA-TC  1093

seq1  TTGTGTATTTATTTCAATATCCTGCCTACTTTATAAGAGCGGAAGAGTCG  1142
      |||||   |||||||||||||||||||||||| ||||||||||||  |  
seq2  TTGTGGTATTATTTCAATATCCTGCCTACTTT-TAAGAGCGGAAGTCTGT  1142

seq1  AATACAGCAGGGGAAAA  1159
      |||||  ||||||||||
seq2  AATACGTCAGGGGAAAA  1159

seq1: chr16_32176180_32176265
seq2: B6Ng01-129M11.g_74_136 (reverse)

seq1  CCTTCCCCCTTCCTCTTCCCCTGCCTTCCCCCTTCTACATCCCCTTCCCA  50
                             ||||||||||| |||||||||||||||
seq2  -----------------------CCTTCCCCCTTTTACATCCCCTTCCCA  27

seq1  CCTCCTCCTACCCCCAGTCCCACATCCTCCCTGTAG  86
      ||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCTACCCCCAGTCCCACATCCTCCCTGTAG  63