BAC Information

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BAC

Clone NameB6Ng01-130C22
Chromosome16 (Build37)
Map Location 58,606,071 - 58,744,713
singlet/doubletdoublet
Overlap geneGm813, E330017A01Rik, Cpox, LOC100043790, Gpr15, Cldnd1
Upstream gene2610528E23Rik, Col8a1, LOC435480, LOC629342, LOC100043477, Dcbld2, St3gal6, LOC100043480
Downstream geneOlfr172, Olfr173, Olfr174, Olfr178, Olfr180, Olfr1563-ps1, Olfr181, Olfr182-ps1, Olfr183, Olfr185-ps1, Olfr186, Olfr187, Olfr188-ps1, Olfr189-ps1, Olfr190, Olfr191, Olfr192, Olfr193, Olfr1540-ps1, Olfr194, Olfr195, Olfr196, Olfr197, Olfr198, Olfr199, Olfr200-ps1, Olfr201, Olfr202, Olfr203, Olfr204, Olfr205, GA_x5J8B7U0478-6-340, Olfr206, Olfr207, Gabrr3, LOC100043803, Mina, BC043118, LOC672884, Arl6, Epha6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130C22.bB6Ng01-130C22.g
ACCDH931561DH931562
length1,189963
definitionDH931561|Mus musculus domesticus DNA, BAC clone: B6Ng01-130C22, 5' end.DH931562|Mus musculus domesticus DNA, BAC clone: B6Ng01-130C22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,743,514 - 58,744,713)(58,606,071 - 58,606,776)
sequence
gaattccaagtgtatctctcatacatctaaactctctgatgttctctatc
tcaattccaataaactcatgaatttcaactcagttggcttgttatatccg
gaaagcctctcaaagctttgccttcccacattaccaagcttacatggata
cgatttgactaagatgtacataaaaatgatttcatgtttccctcactgaa
accttaggcagctaagagaacaaagctcaatgtgcttgagtcactttctc
atgttctgcagtggtctctctaatctaacttcaggctgcctaattgtaga
actgacatcctcagctatcacataagaaattacagaggattcccaagggt
tgtattaggattgttcagctaatccattgtaaaggaattttaatccagca
gagttagtttgaggccaaacagaggaggaattctcttctctctctcatga
gagaagtcagattgaatcagtcagcttggagaagagtttgatctagaaga
gctgagcttaagctgcaagccagagttcagaaagagctacaaagggtaat
cttacacagcaaaataatcctcagagatgacagttacattgggcaaacaa
aagttatttttataatccatgcaatacaggacaatacattgttttttaga
aaaataaattttaaatactcaaaacaggagaatttttcgaaaggaaaatt
taacatctgaaaagtaaaggaacctgatagcaattagttcttttcctcct
gggtaaccccacaaactatttggatataactttgcattgtaagctacttt
ctgtcatcatgcttcatttttagtgcctatgttcagtaaaaaaacaaaca
aaacacacacaaaaaaaaaaacccaaagtttaaactgttacatctaaatt
agtatacaattgaaataaggtaaatacttattatagactacagaatatac
tgatttgaacaaattttcactctgccagttgattttttaaaatcaggtaa
aagtgaccaaaagcttagggagaaactttaattaatcatgatgtgtctta
tacatgctcgtaataaatttaaatagtaattctaataacataataaaaat
catgattaattaaagagaaaatttataaggttacacagagtgtgattcta
cttctgtaaagtggtggtgaacatgatcaaaatttggac
gaattctccatagattgaagtggaggtccatatgaaagatctatacactt
cgttagaggaatttatcccttagaaaacaacatggacaactgacactgac
acaaacatacatggagcaacaacaaaaacagccaatgtaaaaatatagag
tgaaaagaagtatggccaagctgacgactcatgaaacactcatgtttttg
atttaccctttgttgtggtttgaataggtatggcacctatgtgtttgaat
gcctgacccatatgaagtagcactattagaggtgtggccttgctggagta
gatatggccttgttggaggaagtatgtcactgtggggtgagctttgagct
attctatgctcaagctatgcccaatgtagtatatagttttcctcctgctt
cctgtgtgtcaagatgtagagcactgaacttcttctccagcaccatgtct
gcctacatgttgccatgcttcctgccatgctaataaaggactcaacctct
aagctgcaagccagccccaattaaatgttgtcatttatcagttgccatgg
tcatgtgcttcttcacagcaataaaaccctaactaagacagaagttggta
ccaggcaggagtagggtattcatgagtttctttggaccaatgtggatttt
gagactttggattaggaaagcaatgggatgctttaatcagggtttaatgg
atcataatagtaggaacatggaagatagtggtgctgagggtgatttgaac
tgtgggggcctagctcaagaagattcagagaagaattttagtatgtggcc
tagagactgttcttgtgagattttgactaagaatatggctgcttttgccc
ttttcagaaaagtctgcctgagtctaatgtgatagttttggattaattca
ctggcagaggaaatctcaaaatagcctatactgactctgttgtgtggtat
ttatgttcattcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_58743514_58744713
seq2: B6Ng01-130C22.b_44_1232 (reverse)

seq1  GTCCAATATTTTGATCATGGTCA-CACAACTTTTACAGAAGTAGAATACA  49
      |||||| |||||||||||| ||| ||| || ||||||||||||||||   
seq2  GTCCAA-ATTTTGATCATGTTCACCACCAC-TTTACAGAAGTAGAATCAC  48

seq1  ACTCTGTGTAA-CTTATAAAATTTTCTCTTTAAATTAATACATTGAATTA  98
      ||||||||||| ||||| ||||||||||||| ||||||| |||   ||| 
seq2  ACTCTGTGTAACCTTAT-AAATTTTCTCTTT-AATTAAT-CAT--GATTT  93

seq1  TTATTATTGTTATTAGAATTACTATTTTAATTTTATTACGAGCATGTAT-  147
      |||||| ||||||||||||||||| ||||| |||||||||||||||||| 
seq2  TTATTA-TGTTATTAGAATTACTA-TTTAAATTTATTACGAGCATGTATA  141

seq1  AGACACATCATGAATTAATTAAAGTTTCTCCCCTAAGCTTTTTGGTCACT  197
      |||||||||||| |||||||||||||||| |||||||| |||||||||| 
seq2  AGACACATCATG-ATTAATTAAAGTTTCT-CCCTAAGC-TTTTGGTCAC-  187

seq1  TTTTACCTGATTTTAAAAAAATCAACTGGCAGAGTGAAAATTTGTTCAAA  247
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTTTACCTGATTTT-AAAAAATCAACTGGCAGAGTGAAAATTTGTTCAAA  236

seq1  TCAGTATATTCTGTAGTCTATAATAAGTATTTACCTTATTTCAATTGTAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTATATTCTGTAGTCTATAATAAGTATTTACCTTATTTCAATTGTAT  286

seq1  ACTAATTTAGATGTAACAGTTTTAAACTTTGGG-TTTTTTTTTTGTGTGT  346
      ||||||||||||||||||| ||||||||||||| ||||||||||||||||
seq2  ACTAATTTAGATGTAACAG-TTTAAACTTTGGGTTTTTTTTTTTGTGTGT  335

seq1  GTTTTGTTTGTTTTTTTACTGAACATAGGCACTAAAAATGAAGCATGATG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTGTTTTTTTACTGAACATAGGCACTAAAAATGAAGCATGATG  385

seq1  ACAGAAAGTAGCTTACAATGCAAAGTTATATCCAAATAGTTTGTGGGGTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAGTAGCTTACAATGCAAAGTTATATCCAAATAGTTTGTGGGGTT  435

seq1  ACCCAGGAGGAAAAGAACTAATTGCTATCAGGTTCCTTTACTTTTCAGAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGGAGGAAAAGAACTAATTGCTATCAGGTTCCTTTACTTTTCAGAT  485

seq1  GTTAAATTTTCCTTTCGAAAAATTCTCCTGTTTTGAGTATTTAAAATTTA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAATTTTCCTTTCGAAAAATTCTCCTGTTTTGAGTATTTAAAATTTA  535

seq1  TTTTTCTAAAAAACAATGTATTGTCCTGTATTGCATGGATTATAAAAATA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTAAAAAACAATGTATTGTCCTGTATTGCATGGATTATAAAAATA  585

seq1  ACTTTTGTTTGCCCAATGTAACTGTCATCTCTGAGGATTATTTTGCTGTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTGTTTGCCCAATGTAACTGTCATCTCTGAGGATTATTTTGCTGTG  635

seq1  TAAGATTACCCTTTGTAGCTCTTTCTGAACTCTGGCTTGCAGCTTAAGCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATTACCCTTTGTAGCTCTTTCTGAACTCTGGCTTGCAGCTTAAGCT  685

seq1  CAGCTCTTCTAGATCAAACTCTTCTCCAAGCTGACTGATTCAATCTGACT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCTTCTAGATCAAACTCTTCTCCAAGCTGACTGATTCAATCTGACT  735

seq1  TCTCTCATGAGAGAGAGAAGAGAATTCCTCCTCTGTTTGGCCTCAAACTA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCATGAGAGAGAGAAGAGAATTCCTCCTCTGTTTGGCCTCAAACTA  785

seq1  ACTCTGCTGGATTAAAATTCCTTTACAATGGATTAGCTGAACAATCCTAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGCTGGATTAAAATTCCTTTACAATGGATTAGCTGAACAATCCTAA  835

seq1  TACAACCCTTGGGAATCCTCTGTAATTTCTTATGTGATAGCTGAGGATGT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACCCTTGGGAATCCTCTGTAATTTCTTATGTGATAGCTGAGGATGT  885

seq1  CAGTTCTACAATTAGGCAGCCTGAAGTTAGATTAGAGAGACCACTGCAGA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTACAATTAGGCAGCCTGAAGTTAGATTAGAGAGACCACTGCAGA  935

seq1  ACATGAGAAAGTGACTCAAGCACATTGAGCTTTGTTCTCTTAGCTGCCTA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAGAAAGTGACTCAAGCACATTGAGCTTTGTTCTCTTAGCTGCCTA  985

seq1  AGGTTTCAGTGAGGGAAACATGAAATCATTTTTATGTACATCTTAGTCAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTCAGTGAGGGAAACATGAAATCATTTTTATGTACATCTTAGTCAA  1035

seq1  ATCGTATCCATGTAAGCTTGGTAATGTGGGAAGGCAAAGCTTTGAGAGGC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTATCCATGTAAGCTTGGTAATGTGGGAAGGCAAAGCTTTGAGAGGC  1085

seq1  TTTCCGGATATAACAAGCCAACTGAGTTGAAATTCATGAGTTTATTGGAA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCGGATATAACAAGCCAACTGAGTTGAAATTCATGAGTTTATTGGAA  1135

seq1  TTGAGATAGAGAACATCAGAGAGTTTAGATGTATGAGAGATACACTTGGA  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGATAGAGAACATCAGAGAGTTTAGATGTATGAGAGATACACTTGGA  1185

seq1  ATTC  1200
      ||||
seq2  ATTC  1189

seq1: chr16_58606071_58606776
seq2: B6Ng01-130C22.g_67_772

seq1  GAATTCTCCATAGATTGAAGTGGAGGTCCATATGAAAGATCTATACACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATAGATTGAAGTGGAGGTCCATATGAAAGATCTATACACTT  50

seq1  CGTTAGAGGAATTTATCCCTTAGAAAACAACATGGACAACTGACACTGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTAGAGGAATTTATCCCTTAGAAAACAACATGGACAACTGACACTGAC  100

seq1  ACAAACATACATGGAGCAACAACAAAAACAGCCAATGTAAAAATATAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACATACATGGAGCAACAACAAAAACAGCCAATGTAAAAATATAGAG  150

seq1  TGAAAAGAAGTATGGCCAAGCTGACGACTCATGAAACACTCATGTTTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGAAGTATGGCCAAGCTGACGACTCATGAAACACTCATGTTTTTG  200

seq1  ATTTACCCTTTGTTGTGGTTTGAATAGGTATGGCACCTATGTGTTTGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACCCTTTGTTGTGGTTTGAATAGGTATGGCACCTATGTGTTTGAAT  250

seq1  GCCTGACCCATATGAAGTAGCACTATTAGAGGTGTGGCCTTGCTGGAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGACCCATATGAAGTAGCACTATTAGAGGTGTGGCCTTGCTGGAGTA  300

seq1  GATATGGCCTTGTTGGAGGAAGTATGTCACTGTGGGGTGAGCTTTGAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGGCCTTGTTGGAGGAAGTATGTCACTGTGGGGTGAGCTTTGAGCT  350

seq1  ATTCTATGCTCAAGCTATGCCCAATGTAGTATATAGTTTTCCTCCTGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTATGCTCAAGCTATGCCCAATGTAGTATATAGTTTTCCTCCTGCTT  400

seq1  CCTGTGTGTCAAGATGTAGAGCACTGAACTTCTTCTCCAGCACCATGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTGTCAAGATGTAGAGCACTGAACTTCTTCTCCAGCACCATGTCT  450

seq1  GCCTACATGTTGCCATGCTTCCTGCCATGCTAATAAAGGACTCAACCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTACATGTTGCCATGCTTCCTGCCATGCTAATAAAGGACTCAACCTCT  500

seq1  AAGCTGCAAGCCAGCCCCAATTAAATGTTGTCATTTATCAGTTGCCATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGCAAGCCAGCCCCAATTAAATGTTGTCATTTATCAGTTGCCATGG  550

seq1  TCATGTGCTTCTTCACAGCAATAAAACCCTAACTAAGACAGAAGTTGGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGCTTCTTCACAGCAATAAAACCCTAACTAAGACAGAAGTTGGTA  600

seq1  CCAGGCAGGAGTAGGGTATTCATGAGTTTCTTTGGACCAATGTGGATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCAGGAGTAGGGTATTCATGAGTTTCTTTGGACCAATGTGGATTTT  650

seq1  GAGACTTTGGATTAGGAAAGCAATGGGATGCTTTAATCAGGGTTTAATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTTTGGATTAGGAAAGCAATGGGATGCTTTAATCAGGGTTTAATGG  700

seq1  ATCATA  706
      ||||||
seq2  ATCATA  706