BAC Information

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BAC

Clone NameB6Ng01-131D20
Chromosome16 (Build37)
Map Location 64,296,011 - 64,297,118
singlet/doubletsinglet
Overlap genenone
Upstream geneEpha3, LOC100043540
Downstream geneCkt2, 4930453N24Rik, Zfp654, LOC433036, Cggbp1, LOC668242, LOC100043815, LOC677448, Htr1f, LOC668247, LOC672931
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131D20.bB6Ng01-131D20.g
ACCDH932347DH932348
length1,1051,166
definitionDH932347|Mus musculus domesticus DNA, BAC clone: B6Ng01-131D20, 5' end.DH932348|Mus musculus domesticus DNA, BAC clone: B6Ng01-131D20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctggtgggtttacacaaaacaatacacgtgaaattaatttgggc
atagatggataactccatgaaactttataatgcactcacaggggaaaagt
atgattctttaccattacctgtgtctcttacattttttttacttgacttt
taaaaatcgtggcctcagtgggacaggatgtccctaatcctgtagagact
taatgccccagggtgaggaaatatggagtaagggcataccctctcagagg
taagaggaagtgagaggagaaggggaaagaaatctatgtgggggggaccg
ggagcgggaacaacagttggaatgtaaataaataaagtaataaatctaaa
aaaaaaaaggtgttttaaaagaatatttttagaataacaggtatttttaa
agtactctgaaatcaaaacaaatgaaattttacctagttgagaaaatatt
aataattgaatcaataacaaatgaataaaatgtggatgatccctgtgtaa
tttttagtatcaaagctgtgggccttgcccagtactatcagattagcagg
aactggttagttagctggctgcacacctatacattatctttctgttgttc
tttgcacacctatacattatctttctgttgttctttgcacacctatacat
tatctttctgttgttctttgcacacctatacattatctttctgttgttct
ttgcacacctatacattatctttccgttgttctttgcacacctatacatt
atctttccgttgttctttgcacacctatacattatctttccgttgttctt
tgcacacctatacattatctttccgttgttctttgcaaggttcaagtctc
tctagactgtgttttgatcatattcaccccctcccaacttttcataaatc
catcctcccttccgaacctacccagctggatatttcagttttgacccttt
aagacaattggtttctatccaatttttgtgtatgtgcggtttacacacca
ccagagtattggtcagctatcagcactttcacttctcagaaaatgtttct
actttactcagcagctacagttgacatttcactttatacttattcttagc
cgcat
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctccagggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaaccgaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactattcccctccttagatttgggaa
caaaacacccatggaaggagttacagagagggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atgagagctagagaaagtagccaggagctaagggatctgcaaccctatag
tgacacattatgagctaacagtaccccggagctcttgacctttagctgct
atattttcaaagatgtctaagtcggcatcactgtaagagagcccattgac
tttcactttaatgcccagttaaggatttcaggcccaaaggggagtggtgg
gcgcagggagatgtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_64296011_64297118
seq2: B6Ng01-131D20.b_44_1148

seq1  GAATTCCTGGTGGGTTTACACAAAACAATACACGTGAAATTAATTTGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGTGGGTTTACACAAAACAATACACGTGAAATTAATTTGGGC  50

seq1  ATAGATGGATAACTCCATGAAACTTTATAATGCACTCACAGGGGAAAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATGGATAACTCCATGAAACTTTATAATGCACTCACAGGGGAAAAGT  100

seq1  ATGATTCTTTACCATTACCTGTGTCTCTTACATTTTTTTTACTTGACTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTCTTTACCATTACCTGTGTCTCTTACATTTTTTTTACTTGACTTT  150

seq1  TAAAAATCGTGGCCTCAGTGGGACAGGATGTCCCTAATCCTGTAGAGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATCGTGGCCTCAGTGGGACAGGATGTCCCTAATCCTGTAGAGACT  200

seq1  TAATGCCCCAGGGTGAGGAAATATGGAGTAAGGGCATACCCTCTCAGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCCCCAGGGTGAGGAAATATGGAGTAAGGGCATACCCTCTCAGAGG  250

seq1  TAAGAGGAAGTGAGAGGAGAAGGGGAAAGAAATCTATGTGGGGGGGACCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGGAAGTGAGAGGAGAAGGGGAAAGAAATCTATGTGGGGGGGACCG  300

seq1  GGAGCGGGAACAACAGTTGGAATGTAAATAAATAAAGTAATAAATCTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCGGGAACAACAGTTGGAATGTAAATAAATAAAGTAATAAATCTAAA  350

seq1  AAAAAAAAGGTGTTTTAAAAGAATATTTTTAGAATAACAGGTATTTTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAGGTGTTTTAAAAGAATATTTTTAGAATAACAGGTATTTTTAA  400

seq1  AGTACTCTGAAATCAAAACAAATGAAATTTTACCTAGTTGAGAAAATATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTCTGAAATCAAAACAAATGAAATTTTACCTAGTTGAGAAAATATT  450

seq1  AATAATTGAATCAATAACAAATGAATAAAATGTGGATGATCCCTGTGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTGAATCAATAACAAATGAATAAAATGTGGATGATCCCTGTGTAA  500

seq1  TTTTTAGTATCAAAGCTGTGGGCCTTGCCCAGTACTATCAGATTAGCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGTATCAAAGCTGTGGGCCTTGCCCAGTACTATCAGATTAGCAGG  550

seq1  AACTGGTTAGTTAGCTGGCTGCACACCTATACATTATCTTTCTGTTGTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGTTAGTTAGCTGGCTGCACACCTATACATTATCTTTCTGTTGTTC  600

seq1  TTTGCACACCTATACATTATCTTTCTGTTGTTCTTTGCACACCTATACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCACACCTATACATTATCTTTCTGTTGTTCTTTGCACACCTATACAT  650

seq1  TATCTTTCTGTTGTTCTTTGCACACCTATACATTATCTTTCTGTTGTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTCTGTTGTTCTTTGCACACCTATACATTATCTTTCTGTTGTTCT  700

seq1  TTGCACACCTATACATTATCTTTCCGTTGTTCTTTGCACACCTATACATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACACCTATACATTATCTTTCCGTTGTTCTTTGCACACCTATACATT  750

seq1  ATCTTTCCGTTGTTCTTTGCACACCTATACATTATCTTTCCGTTGTTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTCCGTTGTTCTTTGCACACCTATACATTATCTTTCCGTTGTTCTT  800

seq1  TGCACACCTATACATTATCTTTCCGTTGTTCTTTGCAAGGTTCAAGTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACACCTATACATTATCTTTCCGTTGTTCTTTGCAAGGTTCAAGTCTC  850

seq1  TCTAGACTGTGTTTTGATCATATTCACCCCCTCCCAACTTTTCATAAATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGACTGTGTTTTGATCATATTCACCCCCTCCCAACTTTTCATAAATC  900

seq1  CATCCTCCCTTCCGAACCTACCCAGCTGGATATTTCAGGTTTTGACCCTT  950
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CATCCTCCCTTCCGAACCTACCCAGCTGGATATTTCA-GTTTTGACCCTT  949

seq1  TAAGAACAATTGG-TTCTATCCAAATATTTGTGTATGTGCGGTTTTACAC  999
      |||| |||||||| |||||||| ||| ||||||||||||||| |||||||
seq2  TAAG-ACAATTGGTTTCTATCC-AATTTTTGTGTATGTGCGG-TTTACAC  996

seq1  ACCACCAGAGTA-TGGTCAGCTAATCAGCACCTTCAC-TCTCAGGAAAAA  1047
      |||||||||||| ||||||||| |||||||| ||||| ||||||   |||
seq2  ACCACCAGAGTATTGGTCAGCT-ATCAGCACTTTCACTTCTCAG---AAA  1042

seq1  ATGTTTCTACTTTACCCAGCAGCTAACAGTTGACA-TTCAC-TTATACAT  1095
      ||||||||||||||| |||||||| |||||||||| ||||| |||||| |
seq2  ATGTTTCTACTTTACTCAGCAGCT-ACAGTTGACATTTCACTTTATACTT  1091

seq1  TATC-TAGCCGCAT  1108
        || |||||||||
seq2  ATTCTTAGCCGCAT  1105