BAC Information

Click to search

BAC

Clone NameB6Ng01-131F12
Chromosome16 (Build37)
Map Location 23,603,954 - 23,760,007
singlet/doubletdoublet
Overlap geneRtp4, EG625969
Upstream geneDgkg, LOC666459, Crygs, Tbccd1, Dnajb11, Ahsg, Fetub, Hrg, Kng2, LOC624311, LOC666486, LOC666489, Kng1, LOC666493, Eif4a2, Rfc4, Adipoq, LOC100043541, EG625835, BC106179, St6gal1, Rtp1, Masp1, LOC100043018
Downstream geneLOC100043023, Sst, Rtp2, Bcl6, EG433009, LOC666580, LOC100043564, 1110054M08Rik, Lpp, A730098P11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131F12.bB6Ng01-131F12.g
ACCDH932424DH932425
length510717
definitionDH932424|Mus musculus domesticus DNA, BAC clone: B6Ng01-131F12, 5' end.DH932425|Mus musculus domesticus DNA, BAC clone: B6Ng01-131F12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,603,954 - 23,604,469)(23,759,291 - 23,760,007)
sequence
tttagttctgaaggactacattggcaaagtattcaacgtggctttccatc
ctggaaatagaattctccaaatgtcctaggtctaagtctatcttggaact
gagtcccctaaaaatttgattcccaacaatcaaggctgaggtgcttaaga
cacttgcatggctattcctgcccctcctaggattgtgtcttagtctgggt
ttctattcctgtacaaaaatcatgaccaagaagcaatttggggaggaagg
ggtttattcagcttacacttcatcaccaaaggaagtcaggacaggaagga
gtgttacttactggcttgcttcccctgtcttgttcagcttgctttcttat
agaacccaagactactgtcaagggatggcaccacccacagtgggctaggc
cttccccccttgatcacttattgagaaaatgccgtacatctgaatctcat
ggaggcatttcttaaaggaagactcctttctcagtgataacttcagcttg
tgtcaagttg
gaattccactcaaaccccaggatcttcataaaataaactgggacttcatt
cataagaatcccatgcagatttcccaatgtggtgtttcctcttaaggata
actctgagactgtcccaaacagcagcatcttagaatccacagactaactg
gcaggagatgggtttctgccatcacgactggacagaagcaaagacatata
gccatcctcttcagtgacatcatctatagaacctcaagcaagatctgtgg
agtcacagaggagcagtaattaattctggctgggtgggtcctacaaaaca
ttactgaaaagttaactttaagcccgagcctctgggagcagaaggcctgg
gagactagccagtagaaaataaatacagaaaagagttccgagaagagaga
gggacaatgaaccaaatagattttgggaagaatatgaatgtttagacact
tagaaggcaatgggaaggagatacacagtgtgaggcttcagaaaagtaga
actcatcagaaaggatgtagaacaatgtttggatgaagacggggctcttt
aaaggagagcacaaggagtctgaattttagaagaaaatgtcaagtagggg
tgtagaagcctagagggaaatcaaatggaaaaagttttgcattatattat
acgatatgtagatgatagatagatagatagatagatagatagatagatag
atagatagatagataga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_23603954_23604469
seq2: B6Ng01-131F12.b_49_564

seq1  GAATTCTTTAGTTCTGAAGGACTACATTGGCAAAGTATTCAACGTGGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAGTTCTGAAGGACTACATTGGCAAAGTATTCAACGTGGCTT  50

seq1  TCCATCCTGGAAATAGAATTCTCCAAATGTCCTAGGTCTAAGTCTATCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCTGGAAATAGAATTCTCCAAATGTCCTAGGTCTAAGTCTATCTT  100

seq1  GGAACTGAGTCCCCTAAAAATTTGATTCCCAACAATCAAGGCTGAGGTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTGAGTCCCCTAAAAATTTGATTCCCAACAATCAAGGCTGAGGTGC  150

seq1  TTAAGACACTTGCATGGCTATTCCTGCCCCTCCTAGGATTGTGTCTTAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGACACTTGCATGGCTATTCCTGCCCCTCCTAGGATTGTGTCTTAGT  200

seq1  CTGGGTTTCTATTCCTGTACAAAAATCATGACCAAGAAGCAATTTGGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTTCTATTCCTGTACAAAAATCATGACCAAGAAGCAATTTGGGGA  250

seq1  GGAAGGGGTTTATTCAGCTTACACTTCATCACCAAAGGAAGTCAGGACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGGGTTTATTCAGCTTACACTTCATCACCAAAGGAAGTCAGGACAG  300

seq1  GAAGGAGTGTTACTTACTGGCTTGCTTCCCCTGTCTTGTTCAGCTTGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGTGTTACTTACTGGCTTGCTTCCCCTGTCTTGTTCAGCTTGCTT  350

seq1  TCTTATAGAACCCAAGACTACTGTCAAGGGATGGCACCACCCACAGTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATAGAACCCAAGACTACTGTCAAGGGATGGCACCACCCACAGTGGG  400

seq1  CTAGGCCTTCCCCCCTTGATCACTTATTGAGAAAATGCCGTACATCTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCCTTCCCCCCTTGATCACTTATTGAGAAAATGCCGTACATCTGAA  450

seq1  TCTCATGGAGGCATTTCTTAAAGGAAGACTCCTTTCTCAGTGATAACTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGGAGGCATTTCTTAAAGGAAGACTCCTTTCTCAGTGATAACTTC  500

seq1  AGCTTGTGTCAAGTTG  516
      ||||||||||||||||
seq2  AGCTTGTGTCAAGTTG  516

seq1: chr16_23759291_23760007
seq2: B6Ng01-131F12.g_69_785 (reverse)

seq1  TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC  50

seq1  TATCATCTACATATCGTATAATATAATGCAAAACTTTTTCCATTTGATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATCTACATATCGTATAATATAATGCAAAACTTTTTCCATTTGATTT  100

seq1  CCCTCTAGGCTTCTACACCCCTACTTGACATTTTCTTCTAAAATTCAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTAGGCTTCTACACCCCTACTTGACATTTTCTTCTAAAATTCAGAC  150

seq1  TCCTTGTGCTCTCCTTTAAAGAGCCCCGTCTTCATCCAAACATTGTTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTGCTCTCCTTTAAAGAGCCCCGTCTTCATCCAAACATTGTTCTA  200

seq1  CATCCTTTCTGATGAGTTCTACTTTTCTGAAGCCTCACACTGTGTATCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTTCTGATGAGTTCTACTTTTCTGAAGCCTCACACTGTGTATCTC  250

seq1  CTTCCCATTGCCTTCTAAGTGTCTAAACATTCATATTCTTCCCAAAATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCATTGCCTTCTAAGTGTCTAAACATTCATATTCTTCCCAAAATCT  300

seq1  ATTTGGTTCATTGTCCCTCTCTCTTCTCGGAACTCTTTTCTGTATTTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTTCATTGTCCCTCTCTCTTCTCGGAACTCTTTTCTGTATTTATT  350

seq1  TTCTACTGGCTAGTCTCCCAGGCCTTCTGCTCCCAGAGGCTCGGGCTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTGGCTAGTCTCCCAGGCCTTCTGCTCCCAGAGGCTCGGGCTTAA  400

seq1  AGTTAACTTTTCAGTAATGTTTTGTAGGACCCACCCAGCCAGAATTAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAACTTTTCAGTAATGTTTTGTAGGACCCACCCAGCCAGAATTAATT  450

seq1  ACTGCTCCTCTGTGACTCCACAGATCTTGCTTGAGGTTCTATAGATGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTCCTCTGTGACTCCACAGATCTTGCTTGAGGTTCTATAGATGATG  500

seq1  TCACTGAAGAGGATGGCTATATGTCTTTGCTTCTGTCCAGTCGTGATGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGAAGAGGATGGCTATATGTCTTTGCTTCTGTCCAGTCGTGATGGC  550

seq1  AGAAACCCATCTCCTGCCAGTTAGTCTGTGGATTCTAAGATGCTGCTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCCATCTCCTGCCAGTTAGTCTGTGGATTCTAAGATGCTGCTGTT  600

seq1  TGGGACAGTCTCAGAGTTATCCTTAAGAGGAAACACCACATTGGGAAATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACAGTCTCAGAGTTATCCTTAAGAGGAAACACCACATTGGGAAATC  650

seq1  TGCATGGGATTCTTATGAATGAAGTCCCAGTTTATTTTATGAAGATCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGGGATTCTTATGAATGAAGTCCCAGTTTATTTTATGAAGATCCTG  700

seq1  GGGTTTGAGTGGAATTC  717
      |||||||||||||||||
seq2  GGGTTTGAGTGGAATTC  717