BAC Information

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BAC

Clone NameB6Ng01-131J18
Chromosome16 (Build37)
Map Location 63,244,570 - 63,245,714
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043806, Nsun3, Arl13b, Stx19, Pros1
Downstream geneEpha3, LOC100043540
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131J18.bB6Ng01-131J18.g
ACCDH932622DH932623
length1,142111
definitionDH932622|Mus musculus domesticus DNA, BAC clone: B6Ng01-131J18, 5' end.DH932623|Mus musculus domesticus DNA, BAC clone: B6Ng01-131J18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgggctttctaccatatagtccagaaggcaatctgcaatatgt
taccaaagtaccaacttcacacagttgtaccatttccctctttcactgtt
ttctgcttcctactgattcactacaacttaatttaatggctgtctatagg
ggctggagagatggctccataggtaagagctggatgttcttcaaagggat
atgcgtttgattccccaaactgacatagatgtttacaatgggggatgcta
ccaactgaagggcctgcatacatatgctacacagacatacaaaagttgac
aaaacacaaaacacccacattcatgtaaatgacaattaaaaagtacttaa
agtacagtaacatagatatagaatttctcaaatgaaatcaggatcaagtg
agtagttaagaatataactcctcacttgggtacaggtggctgattgatga
cagaatctagtgaacaagtaatcagttgttttaaaatatgctaagaacag
tccgtcataaaaaagtggactgttgattcaccctagctggagctttggcc
cactaaatgaaaactagagaaaagggtacaaagagttgtgcttataacag
tggatgatgggatataaattaattagagcaatgaatgacagtgtgagttg
gagaatggagagaatgtggacgaagctttccactgacctgcaaagtttta
acttgatttctttagttgtgcttcccgggaaaagcataaaaaaattggat
gataaggtcacagaattagatgtatgaaatcaagattttgggcgccatgt
aattatctagcaaaggtctagagaacagtcagaggagagaattggaaaat
aaatatattccagttggttttaaaaattcttggtttgtaaaaacacctcc
ttcacaacaaatggtctcagagctacatgctgtttcatacccaaaccaaa
tatttcttcaatgtgttttttacttcattatctcacacatcctagagtga
acaatctgtatttgtaatctcagttgttttttcatagactatgagatctt
gttcatgtgcacaatttccttgtaaatgtatttacttacaaaaaaagcca
tgttaaaaaattgggaggatcatttcactgaaacttactgtt
aagattaagtgaccagcaaatcttttgtcaggcgaagatcagttgcctca
tttaaaaatagcttttctttatgagagagggagagggagagggagaggga
gagggagaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_63244570_63245714
seq2: B6Ng01-131J18.b_42_1183

seq1  GAATTCATGGGCTTTCTACCATATAGTCCAGAAGGCAATCTGCAATATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGGCTTTCTACCATATAGTCCAGAAGGCAATCTGCAATATGT  50

seq1  TACCAAAGTACCAACTTCACACAGTTGTACCATTTCCCTCTTTCACTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAAGTACCAACTTCACACAGTTGTACCATTTCCCTCTTTCACTGTT  100

seq1  TTCTGCTTCCTACTGATTCACTACAACTTAATTTAATGGCTGTCTATAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTTCCTACTGATTCACTACAACTTAATTTAATGGCTGTCTATAGG  150

seq1  GGCTGGAGAGATGGCTCCATAGGTAAGAGCTGGATGTTCTTCAAAGGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGAGAGATGGCTCCATAGGTAAGAGCTGGATGTTCTTCAAAGGGAT  200

seq1  ATGCGTTTGATTCCCCAAACTGACATAGATGTTTACAATGGGGGATGCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGTTTGATTCCCCAAACTGACATAGATGTTTACAATGGGGGATGCTA  250

seq1  CCAACTGAAGGGCCTGCATACATATGCTACACAGACATACAAAAGTTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTGAAGGGCCTGCATACATATGCTACACAGACATACAAAAGTTGAC  300

seq1  AAAACACAAAACACCCACATTCATGTAAATGACAATTAAAAAGTACTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACAAAACACCCACATTCATGTAAATGACAATTAAAAAGTACTTAA  350

seq1  AGTACAGTAACATAGATATAGAATTTCTCAAATGAAATCAGGATCAAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAGTAACATAGATATAGAATTTCTCAAATGAAATCAGGATCAAGTG  400

seq1  AGTAGTTAAGAATATAACTCCTCACTTGGGTACAGGTGGCTGATTGATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTTAAGAATATAACTCCTCACTTGGGTACAGGTGGCTGATTGATGA  450

seq1  CAGAATCTAGTGAACAAGTAATCAGTTGTTTTAAAATATGCTAAGAACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATCTAGTGAACAAGTAATCAGTTGTTTTAAAATATGCTAAGAACAG  500

seq1  TCCGTCATAAAAAAGTGGACTGTTGATTCACCCTAGCTGGAGCTTTGGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTCATAAAAAAGTGGACTGTTGATTCACCCTAGCTGGAGCTTTGGCC  550

seq1  CACTAAATGAAAACTAGAGAAAAGGGTACAAAGAGTTGTGCTTATAACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAATGAAAACTAGAGAAAAGGGTACAAAGAGTTGTGCTTATAACAG  600

seq1  TGGATGATGGGATATAAATTAATTAGAGCAATGAATGACAGTGTGAGTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGATGGGATATAAATTAATTAGAGCAATGAATGACAGTGTGAGTTG  650

seq1  GAGAATGGAGAGAATGTGGACGAAGCTTTCCACTGACCTGCAAAGTTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGGAGAGAATGTGGACGAAGCTTTCCACTGACCTGCAAAGTTTTA  700

seq1  ACTTGATTTCTTTAGTTGTGCTTCCCGGGAAAAGCATAAAAAAATTGGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGATTTCTTTAGTTGTGCTTCCCGGGAAAAGCATAAAAAAATTGGAT  750

seq1  GATAAGGTCACAGAATTAGATGTATGAAATCAAGATTTTGGGCGCCATGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGGTCACAGAATTAGATGTATGAAATCAAGATTTTGGGCGCCATGT  800

seq1  AATTATCTAGCAAAGGTCTAGAGAACAGTCAGAGGAGAGAATTGGAAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCTAGCAAAGGTCTAGAGAACAGTCAGAGGAGAGAATTGGAAAAT  850

seq1  AAATATATTCCAGTTGGTTTTAAAAATTCTTGGTTTGTAAAAACACCTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATATTCCAGTTGGTTTTAAAAATTCTTGGTTTGTAAAAACACCTCC  900

seq1  TTCACAACAAATGGTCTCAGAGCTACATGCTGTTTCATACCCAAACCAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAACAAATGGTCTCAGAGCTACATGCTGTTTCATACCCAAACCAAA  950

seq1  TATTCCTTCAATGTGTTTTTTACTTCAATTATCTCACACATCCTAGAGTG  1000
      |||| ||||||||||||||||||||| |||||||||||||||||||||||
seq2  TATTTCTTCAATGTGTTTTTTACTTC-ATTATCTCACACATCCTAGAGTG  999

seq1  AACAATCTGTATTTGTAATCTCAGTTG-TTTATCATAGACTATGAGAATC  1049
      ||||||||||||||||||||||||||| ||| |||||||||||||| |||
seq2  AACAATCTGTATTTGTAATCTCAGTTGTTTTTTCATAGACTATGAG-ATC  1048

seq1  TGGTCCATGGTGCACAA-TTCCCTGTAAATTGTAATTACATACAAAATAA  1098
      | || ||| |||||||| |||| |||||| |||| |||| ||||||| ||
seq2  TTGTTCAT-GTGCACAATTTCCTTGTAAA-TGTATTTACTTACAAAAAAA  1096

seq1  GCACATG-TAAAAAAATGGGAGGATTCATTCCACTGAAACTTACTGTT  1145
      || |||| ||||||| |||||||| ||||| |||||||||||||||||
seq2  GC-CATGTTAAAAAATTGGGAGGA-TCATTTCACTGAAACTTACTGTT  1142