BAC Information

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BAC

Clone NameB6Ng01-132C07
Chromosome16 (Build37)
Map Location 53,304,978 - 53,305,753
singlet/doubletsinglet
Overlap genenone
Upstream geneAlcam, LOC100043430, LOC667895
Downstream geneLOC433027, LOC100043442
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132C07.bB6Ng01-132C07.g
ACCDH933022DH933023
length1,136777
definitionDH933022|Mus musculus domesticus DNA, BAC clone: B6Ng01-132C07, 5' end.DH933023|Mus musculus domesticus DNA, BAC clone: B6Ng01-132C07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaacta
ttcaatatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccacttcattccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcaaggatgaggagaaagaggaacactcctccattgttggtg
ggaatgcaagcttgtacaaccactctggaaatcagtctggaggttcctca
gaaaaatggacatagtactaccggaggatcccgcaatacctctcttgggc
atatatccagaatatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacaaaaaatgtggtacatttacacaatg
gatttctactcagctatgaaaaaaatgaatttatgaaattcctaggcaaa
tggatgggcctggaatgcatcatcctgtgtgaggtaacacaatctcaaag
gaactcgcacaatatgcattcactgataagtggatattagcccagaaact
taggatacccaagatataagatacaatttgctaaatgcatgaaattcaag
aagaacgaagaccaaagtgtggatactttgccccttcttagaaatgggaa
ccaaacacccatggaaggagttacagagacaaaatttggagctttgatga
aaggatggaccatctagtgattgccatatgcagggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttgctgaag
gacccagatatagctgtctcttgtgagactatgctggggccttgcaaaca
cagaagtggatgctcacagtcagctattggatggatcacacggccccatg
gaggagctagagaagtacccatgagctaaaggactgcaccctataggtgg
acacatatgactacagtacccagagttcttgtctctagctgcatatgtat
caagatgctagtctgcatcctgtaaaaaaggccatggactgcaacctatg
tccagtcggacccagcaagattagtgtgttagaatt
gaattcctattttttttaatttaaaattttattatttttaatccacaagc
cttaaatagcctagtcaaaataaataaataaataaataaaacaaaacaaa
acaaaacaagtgaaaccaagacactgtccaggcccttccagcccgccaaa
cacatgagctcttcagttaccaactggaagagtaaggagaaacatgaatg
ggagtcaccgagttccataaacaaatttatataactgaagagtccatcct
gggttaagaaaatcacctttacaaaagaggaagaaaaggggcaaaggaaa
caaaataatgcaacctgaaggagaaaatccagagttccaaatcagcttag
gaactgtcccaaagggcagccctaaattcctactattccccagtataggg
caataccaggtccagggagcaggaggaggtaggttggggaacagggtggg
ggagaaaatatctaataaataaaaaaaaaaaaaagaaagaaaagaataac
attttgttggtccaagaaaaaaaattatccagttattattctactggaga
gctactactgaagtcttgctgacaggaatattttgcggctttttttctgg
gaggtgagcctgaccaataaagttgcttggagccaaccatcagactgagt
ttctgaacctgtgggggagctagcaaaaggattggaggagaggagagggg
aatgaattgcaaactcataggaaggaaagagagcgccgatgtgagatggg
tgcaggggctgtgggcattgtggaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_53304978_53305753
seq2: B6Ng01-132C07.g_67_843 (reverse)

seq1  CCCTCCACAATGCCCACTGCCCCTGC-CCCATCCCACATCGGCGCTCTCT  49
      ||||||||||||||||| |||||||| |||||| ||||||||||||||||
seq2  CCCTCCACAATGCCCACAGCCCCTGCACCCATCTCACATCGGCGCTCTCT  50

seq1  TTCCTTCCTATGAGTTTGCAATTCATTCCCCTCTCCTCTCCTCCAATCCT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCCTATGAGTTTGCAATTCATTCCCCTCTCCTCTCCTCCAATCCT  100

seq1  TTTGCTAGCTCCCCCACAGGTTCAGAAACTCAGTCTGATGGTTGGCTCCA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTAGCTCCCCCACAGGTTCAGAAACTCAGTCTGATGGTTGGCTCCA  150

seq1  AGCAACTTTATTGGTCAGGCTCACCTCCCAGAAAAAAAGCCGCAAAATAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACTTTATTGGTCAGGCTCACCTCCCAGAAAAAAAGCCGCAAAATAT  200

seq1  TCCTGTCAGCAAGACTTCAGTAGTAGCTCTCCAGTAGAATAATAACTGGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCAGCAAGACTTCAGTAGTAGCTCTCCAGTAGAATAATAACTGGA  250

seq1  TAATTTTTTTTCTTGGACCAACAAAATGTTATTCTTTTCTTTCTTTTTTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTTTTTCTTGGACCAACAAAATGTTATTCTTTTCTTTCTTTTTTT  300

seq1  TTTTTTTATTTATTAGATATTTTCTCCCCCACCCTGTTCCCCAACCTACC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTATTTATTAGATATTTTCTCCCCCACCCTGTTCCCCAACCTACC  350

seq1  TCCTCCTGCTCCCTGGACCTGGTATTGCCCTATACTGGGGAATAGTAGGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTGCTCCCTGGACCTGGTATTGCCCTATACTGGGGAATAGTAGGA  400

seq1  ATTTAGGGCTGCCCTTTGGGACAGTTCCTAAGCTGATTTGGAACTCTGGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGGGCTGCCCTTTGGGACAGTTCCTAAGCTGATTTGGAACTCTGGA  450

seq1  TTTTCTCCTTCAGGTTGCATTATTTTGTTTCCTTTGCCCCTTTTCTTCCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCCTTCAGGTTGCATTATTTTGTTTCCTTTGCCCCTTTTCTTCCT  500

seq1  CTTTTGTAAAGGTGATTTTCTTAACCCAGGATGGACTCTTCAGTTATATA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTAAAGGTGATTTTCTTAACCCAGGATGGACTCTTCAGTTATATA  550

seq1  AATTTGTTTATGGAACTCGGTGACTCCCATTCATGTTTCTCCTTACTCTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTTTATGGAACTCGGTGACTCCCATTCATGTTTCTCCTTACTCTT  600

seq1  CCAGTTGGTAACTGAAGAGCTCATGTGTTTGGCGGGCTGGAAGGGCCTGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTGGTAACTGAAGAGCTCATGTGTTTGGCGGGCTGGAAGGGCCTGG  650

seq1  ACAGTGTCTTGGTTTCACTTGTTTTGTTTTGTTTTGTTTTATTTATTTAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGTCTTGGTTTCACTTGTTTTGTTTTGTTTTGTTTTATTTATTTAT  700

seq1  TTATTTATTTTGACTAGGCTATTTAAGGCTTGTGGATTAAAAATAATAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATTTTGACTAGGCTATTTAAGGCTTGTGGATTAAAAATAATAAA  750

seq1  ATTTTAAATTAAAAAAAATAGGAATTC  776
      |||||||||||||||||||||||||||
seq2  ATTTTAAATTAAAAAAAATAGGAATTC  777