BAC Information

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BAC

Clone NameB6Ng01-132G22
Chromosome16 (Build37)
Map Location 75,901,771 - 76,076,749
singlet/doubletdoublet
Overlap geneSamsn1
Upstream geneLOC665042, D930038D03Rik, Rbm11, Stch, LOC546667
Downstream gene4930578N18Rik, LOC100039457, Nrip1, LOC100039316, 1700063K16Rik, LOC665120, Usp25
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132G22.bB6Ng01-132G22.g
ACCDH933236DH933237
length1,1561,070
definitionDH933236|Mus musculus domesticus DNA, BAC clone: B6Ng01-132G22, 5' end.DH933237|Mus musculus domesticus DNA, BAC clone: B6Ng01-132G22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,901,771 - 75,902,932)(76,075,668 - 76,076,749)
sequence
gaattcttaatattagcaaataaggagaaatgcctcactttgacgagata
tgatctggaaatttagatatattgtttatgcacttggttccattgtttga
aaatacattccctgtggataatgaagtcatttttttctctaaatcaggga
aagacaagagacaaatggttaagtaagtcgagttttaaaagacaaagtgt
gttagtagtccgggtagtgtctcttcattcttcctataggatataaaata
ttcaatgttataccaaggggaagccacattctcttcagtcactatctttg
gatttttctgcatgctgacttagtactttctaaatattggcaatatattt
ggcaccaaagtttttctacttgcttgagattaaattttggttttggattt
acattctataagatgggaaaatctaaaacaagttagtgatttgctggaaa
gaatattcttcattaaaaacagctaataattttaatcattttaacagtta
attgaatgagttatgaattcatccatcaaattaatgtattttgaaggaag
agagaaaagccctccaaaagttgggtataaattatgggtgattcctttga
accagtgaacagtaaacttgagccatttcttagaatatagacacaagttg
aataaaaggatagtataggatattagtagtcttagtgtttgctgcattta
aagtgtgactacattgaaagggatgtcatctgtccaaagagatgacagat
tctaagtcttgtccacagcacattcatactccttcccttcatgaaaccat
agtttttcaactcctattatttgaaacactaaacagtggactgaatttat
ctaaatgaatatattaaaatttaatccaaaaagaaactgcagcaacagta
gagtacagatctggttatagaaacgctgttatgtaacattcaaacctttc
ttaaccttggggtgaaatacttcacgtgtacagaattacactgctctcta
taaattaacggatatagtgctatgtcatcgaggctttggaaggattttta
aagttaatggaacttgtgtgaatcattccttgaagttgtggatcagagaa
gttactgttacccaccagccaacaatagagttctgttgtctaccgaaact
tatgat
gaattctcatctcaaaagtacctctttccgcggtggtgtcgacagctgat
tttgctttgatcattttttttaaagacaatctaagtaattgcccacattt
ttcactttcaatagacacagcttgattgttattagaagcaaatgcatacg
gttgagcacaatccaaggtacgaggctgaagtgaagacattagctatgga
aagtggtgcttaggggacaattaaaagatttgttcaagttatatttatca
ctgttccttcttgcataagaattggtgatttatttttaatgaaagcttaa
atttttaccaaacgttggcattttggacagtgccaagcgaagcaaatgaa
aattccatctggcctgacttcagtccttaaaaactttttatttgtctcct
aacgacaacaaatgctcggcctgggccagtttgtttagttacttaatatt
ttaaatagattaaaaatatgtggcagaataccatttcttggctttggaaa
attaagcccttggttctgttcctactttagaggaaggtcctgtacttttt
tgacaggcagagtaagaaaagaagattaaaactgctttcctgggtcctca
actttgtcagggataacacagaaatctctatcattcatgcagcataggga
gttctaaagcattaacaatttatctcgcttatgtattataaaaactggaa
agtatatatttttcataccaatcaccaaatccagctataatgcaaaagca
tattgcaagtttgattggtacaattcctgctgaatgaataaaacagggca
tggacctgggaaagctgctgcccaataaactcgacaatgtaaatctcatc
caaatgggagaaaaaggagtttggggaaatgtgctactttgcaagaaagg
tactatcttcgatgtgtaaatgttttccttctgaacagcataaagtagag
catttgctgctctctctgtttgtgtgtgatcatatattcctagagctatt
tcactattcctatcattgtcaggagagaacagcttaagaagctgggctaa
ataggctcaagtggatggcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_75901771_75902932
seq2: B6Ng01-132G22.b_49_1204

seq1  GAATTCTTAATATTAGCAAATAAGGAGAAATGCCTCACTTTGACGAGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAATATTAGCAAATAAGGAGAAATGCCTCACTTTGACGAGATA  50

seq1  TGATCTGGAAATTTAGATATATTGTTTATGCACTTGGTTCCATTGTTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTGGAAATTTAGATATATTGTTTATGCACTTGGTTCCATTGTTTGA  100

seq1  AAATACATTCCCTGTGGATAATGAAGTCATTTTTTTCTCTAAATCAGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACATTCCCTGTGGATAATGAAGTCATTTTTTTCTCTAAATCAGGGA  150

seq1  AAGACAAGAGACAAATGGTTAAGTAAGTCGAGTTTTAAAAGACAAAGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAAGAGACAAATGGTTAAGTAAGTCGAGTTTTAAAAGACAAAGTGT  200

seq1  GTTAGTAGTCCGGGTAGTGTCTCTTCATTCTTCCTATAGGATATAAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTAGTCCGGGTAGTGTCTCTTCATTCTTCCTATAGGATATAAAATA  250

seq1  TTCAATGTTATACCAAGGGGAAGCCACATTCTCTTCAGTCACTATCTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATGTTATACCAAGGGGAAGCCACATTCTCTTCAGTCACTATCTTTG  300

seq1  GATTTTTCTGCATGCTGACTTAGTACTTTCTAAATATTGGCAATATATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTCTGCATGCTGACTTAGTACTTTCTAAATATTGGCAATATATTT  350

seq1  GGCACCAAAGTTTTTCTACTTGCTTGAGATTAAATTTTGGTTTTGGATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCAAAGTTTTTCTACTTGCTTGAGATTAAATTTTGGTTTTGGATTT  400

seq1  ACATTCTATAAGATGGGAAAATCTAAAACAAGTTAGTGATTTGCTGGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCTATAAGATGGGAAAATCTAAAACAAGTTAGTGATTTGCTGGAAA  450

seq1  GAATATTCTTCATTAAAAACAGCTAATAATTTTAATCATTTTAACAGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTCTTCATTAAAAACAGCTAATAATTTTAATCATTTTAACAGTTA  500

seq1  ATTGAATGAGTTATGAATTCATCCATCAAATTAATGTATTTTGAAGGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAATGAGTTATGAATTCATCCATCAAATTAATGTATTTTGAAGGAAG  550

seq1  AGAGAAAAGCCCTCCAAAAGTTGGGTATAAATTATGGGTGATTCCTTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAAGCCCTCCAAAAGTTGGGTATAAATTATGGGTGATTCCTTTGA  600

seq1  ACCAGTGAACAGTAAACTTGAGCCATTTCTTAGAATATAGACACAAGTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTGAACAGTAAACTTGAGCCATTTCTTAGAATATAGACACAAGTTG  650

seq1  AATAAAAGGATAGTATAGGATATTAGTAGTCTTAGTGTTTGCTGCATTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAGGATAGTATAGGATATTAGTAGTCTTAGTGTTTGCTGCATTTA  700

seq1  AAGTGTGACTACATTGAAAGGGATGTCATCTGTCCAAAGAGATGACAGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGACTACATTGAAAGGGATGTCATCTGTCCAAAGAGATGACAGAT  750

seq1  TCTAAGTCTTGTCCACAGCACATTCATACTCCTTCCCTTCATGAAACCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGTCTTGTCCACAGCACATTCATACTCCTTCCCTTCATGAAACCAT  800

seq1  AGTTTTTCAACTCCTATTATTTGAAACACTAAACAGTGGACTGAATTTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTCAACTCCTATTATTTGAAACACTAAACAGTGGACTGAATTTAT  850

seq1  CTAAATGAATATATTAAAATTTAATCCAAAAAGAAACTGCAGCAACAGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATGAATATATTAAAATTTAATCCAAAAAGAAACTGCAGCAACAGTA  900

seq1  GAGTACAGATCTGGTTATAGAAACGCTGTTATGTAACATTCAAACCTTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACAGATCTGGTTATAGAAACGCTGTTATGTAACATTCAAACCTTTC  950

seq1  TTAACCTT-GGGTGAAATACTTCACGTGTACAGAATTACACTGCTCTCTA  999
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCTTGGGGTGAAATACTTCACGTGTACAGAATTACACTGCTCTCTA  1000

seq1  TAAATTAACGGAATATAGTGCTATGTCATCGAGGCTTTGGAAGGATTTTT  1049
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAACGG-ATATAGTGCTATGTCATCGAGGCTTTGGAAGGATTTTT  1049

seq1  AAAGTTAATGGAACCTGGTGTGGAATACATTCCTTG-AGTTGTTGATCAG  1098
      ||||||||||||| || |||| |||| ||||||||| |||||| ||||||
seq2  AAAGTTAATGGAA-CTTGTGT-GAAT-CATTCCTTGAAGTTGTGGATCAG  1096

seq1  GAGAGTTACTGTTACCCACCAGCCAAACACTAGAGTTCTTGTTTGTCTAC  1148
         ||||||||||||||||||||| |||| |||||||||   ||||||||
seq2  AGAAGTTACTGTTACCCACCAGCC-AACAATAGAGTTCT--GTTGTCTAC  1143

seq1  CAGAACTTAATGAT  1162
      |  ||||| |||||
seq2  CGAAACTT-ATGAT  1156

seq1: chr16_76075668_76076749
seq2: B6Ng01-132G22.g_66_1135 (reverse)

seq1  GGCCAT-CACTGTGAGCCCTATTTTAGCCCAGCTCTTTAAAGCTGTTCTT  49
      |||||| |||| |||| |||| |||||||||||| | | ||||||||| |
seq2  GGCCATCCACT-TGAG-CCTA-TTTAGCCCAGCT-TCTTAAGCTGTTC-T  45

seq1  CTTCTGGACAAATGATAAGGAATAGTGAAATAGCTCTAGGAATATTATGA  99
      || || ||| |||||| ||||||||||||||||||||||||||| |||||
seq2  CTCCT-GAC-AATGAT-AGGAATAGTGAAATAGCTCTAGGAATA-TATGA  91

seq1  TCAACACACAAACAGAGAGAGCAGCAAATGCCTCTACTTTATGCTGTTCA  149
      || ||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TC-ACACACAAACAGAGAGAGCAGCAAATG-CTCTACTTTATGCTGTTCA  139

seq1  GAAGGGAAAACATTTACACATCGAAGATAGTACCTTTCTTGCAAAGTAGC  199
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAA-GGAAAACATTTACACATCGAAGATAGTACCTTTCTTGCAAAGTAGC  188

seq1  ACATTTCCCCAAAACTCCTTTTTCTCCCATTTGGATGAGATTTACATTGT  249
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCCCC-AAACTCCTTTTTCTCCCATTTGGATGAGATTTACATTGT  237

seq1  CGAGTTTATTGGGCAGCAGCTTTCCCAGGTCCATGCCCTGTTTTATTCAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTTTATTGGGCAGCAGCTTTCCCAGGTCCATGCCCTGTTTTATTCAT  287

seq1  TCAGCAGGAATTGTACCAATCAAACTTGCAATATGCTTTTGCATTATAGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAGGAATTGTACCAATCAAACTTGCAATATGCTTTTGCATTATAGC  337

seq1  TGGATTTGGTGATTGGTATGAAAAATATATACTTTCCAGTTTTTATAATA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTTGGTGATTGGTATGAAAAATATATACTTTCCAGTTTTTATAATA  387

seq1  CATAAGCGAGATAAATTGTTAATGCTTTAGAACTCCCTATGCTGCATGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGCGAGATAAATTGTTAATGCTTTAGAACTCCCTATGCTGCATGAA  437

seq1  TGATAGAGATTTCTGTGTTATCCCTGACAAAGTTGAGGACCCAGGAAAGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGAGATTTCTGTGTTATCCCTGACAAAGTTGAGGACCCAGGAAAGC  487

seq1  AGTTTTAATCTTCTTTTCTTACTCTGCCTGTCAAAAAAGTACAGGACCTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTAATCTTCTTTTCTTACTCTGCCTGTCAAAAAAGTACAGGACCTT  537

seq1  CCTCTAAAGTAGGAACAGAACCAAGGGCTTAATTTTCCAAAGCCAAGAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAAAGTAGGAACAGAACCAAGGGCTTAATTTTCCAAAGCCAAGAAA  587

seq1  TGGTATTCTGCCACATATTTTTAATCTATTTAAAATATTAAGTAACTAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATTCTGCCACATATTTTTAATCTATTTAAAATATTAAGTAACTAAA  637

seq1  CAAACTGGCCCAGGCCGAGCATTTGTTGTCGTTAGGAGACAAATAAAAAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTGGCCCAGGCCGAGCATTTGTTGTCGTTAGGAGACAAATAAAAAG  687

seq1  TTTTTAAGGACTGAAGTCAGGCCAGATGGAATTTTCATTTGCTTCGCTTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAGGACTGAAGTCAGGCCAGATGGAATTTTCATTTGCTTCGCTTG  737

seq1  GCACTGTCCAAAATGCCAACGTTTGGTAAAAATTTAAGCTTTCATTAAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGTCCAAAATGCCAACGTTTGGTAAAAATTTAAGCTTTCATTAAAA  787

seq1  ATAAATCACCAATTCTTATGCAAGAAGGAACAGTGATAAATATAACTTGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCACCAATTCTTATGCAAGAAGGAACAGTGATAAATATAACTTGA  837

seq1  ACAAATCTTTTAATTGTCCCCTAAGCACCACTTTCCATAGCTAATGTCTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATCTTTTAATTGTCCCCTAAGCACCACTTTCCATAGCTAATGTCTT  887

seq1  CACTTCAGCCTCGTACCTTGGATTGTGCTCAACCGTATGCATTTGCTTCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCAGCCTCGTACCTTGGATTGTGCTCAACCGTATGCATTTGCTTCT  937

seq1  AATAACAATCAAGCTGTGTCTATTGAAAGTGAAAAATGTGGGCAATTACT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACAATCAAGCTGTGTCTATTGAAAGTGAAAAATGTGGGCAATTACT  987

seq1  TAGATTGTCTTTAAAAAAAATGATCAAAGCAAAATCAGCTGTCGACACCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTGTCTTTAAAAAAAATGATCAAAGCAAAATCAGCTGTCGACACCA  1037

seq1  CCGCGGAAAGAGGTACTTTTGAGATGAGAATTC  1082
      |||||||||||||||||||||||||||||||||
seq2  CCGCGGAAAGAGGTACTTTTGAGATGAGAATTC  1070