BAC Information

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BAC

Clone NameB6Ng01-132J03
Chromosome16 (Build37)
Map Location 95,277,417 - 95,430,617
singlet/doubletdoublet
Overlap geneLOC666201
Upstream geneSim2, Hlcs, LOC622832, LOC100040857, Dscr6, LOC545178, Pigp, Ttc3, Dscr3, Dyrk1a, Kcnj6
Downstream geneKcnj15, Erg, Ets2, LOC625548, LOC100040997, Dscr2, Brwd1, LOC100041318, Hmgn1, Wrb, 4921526F01Rik, Sh3bgr
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132J03.bB6Ng01-132J03.g
ACCDH933340DH933341
length99698
definitionDH933340|Mus musculus domesticus DNA, BAC clone: B6Ng01-132J03, 5' end.DH933341|Mus musculus domesticus DNA, BAC clone: B6Ng01-132J03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,277,417 - 95,278,149)(95,430,520 - 95,430,617)
sequence
gaattcagaaatgggatgatatcatttaatgttcttctcaaaagtttgtt
ttatacacttaatccctaggttcatgtgttgatggtatttggaggtgggg
ccttggggagctatggctaaactatcattagtgttagctgaagtaatgag
ggaggcgctcacaagctggcattagtggcattataagaaaaggaagagag
acttggactacccttctttctctgtcttaatggtgtatcctagcttcttt
tactgtggctgtgactgaaagctctgacaaaagcaacctaaggaatgtaa
aaatcgatttggctcacaatccaaagttatagccattactgtgtgtgtgt
gtgtgggggggtcacagatgtaggagctggagacagctggtgacactcta
aacagaaaagagacagagagaaacagagatccatctgtgcaggcacctca
gctcagctccctttcttctacaactaagatgggtaaaaataaaagaacat
catcaagatattgcccccgggcccccagtcagactctgaggcccatctcc
catgtgagtctcgatcctgtcaaactggtaattaacagcaacaatcacag
ctccactccttgtcaagctgacaaccaaacacatcactttaaatccatag
tcttctctaccccctatagccttatgaccatgttataaggtaaaatgcat
tcaacccccaaacgtttttcttatctaggacttttgtcataaagggacaa
tagcttgaaagctcttccacattccatgaacaaaacagttcaaagaccta
taaaccacatggtcagctttatcactacaatggccctacctcccagtacc
aaatttctgttcttgtatttttttcctgttactgtgaaaaattttttctg
aaaaggcaacttgaggcagaaaagtctgattttagctcacagtttaaagt
tatcattccatcattgcaagggaaacacagtggcagaagcttgggg
tcactcacagaggtgagccaggggcatcacagggtgccagtgctgtgtgt
gttcagtgaatgatttgacggagagggagagggagagggagagggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_95277417_95278149
seq2: B6Ng01-132J03.b_49_782

seq1  GAATTCAGAAATGGGATGATATCATTTAATGTTCTTCTCAAAAGTTTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAATGGGATGATATCATTTAATGTTCTTCTCAAAAGTTTGTT  50

seq1  TTATACACTTAATCCCTAGGTTCATGTGTTGATGGTATTTGGAGGTGGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACACTTAATCCCTAGGTTCATGTGTTGATGGTATTTGGAGGTGGGG  100

seq1  CCTTGGGGAGCTATGGCTAAACTATCATTAGTGTTAGCTGAAGTAATGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGGGAGCTATGGCTAAACTATCATTAGTGTTAGCTGAAGTAATGAG  150

seq1  GGAGGCGCTCACAAGCTGGCATTAGTGGCATTATAAGAAAAGGAAGAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCGCTCACAAGCTGGCATTAGTGGCATTATAAGAAAAGGAAGAGAG  200

seq1  ACTTGGACTACCCTTCTTTCTCTGTCTTAATGGTGTATCCTAGCTTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGACTACCCTTCTTTCTCTGTCTTAATGGTGTATCCTAGCTTCTTT  250

seq1  TACTGTGGCTGTGACTGAAAGCTCTGACAAAAGCAACCTAAGGAATGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTGGCTGTGACTGAAAGCTCTGACAAAAGCAACCTAAGGAATGTAA  300

seq1  AAATCGATTTGGCTCACAATCCAAAGTTATAGCCATTACTGTGTGTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCGATTTGGCTCACAATCCAAAGTTATAGCCATTACTGTGTGTGTGT  350

seq1  GTGTGGGGGGGTCACAGATGTAGGAGCTGGAGACAGCTGGTGACACTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGGGGGGTCACAGATGTAGGAGCTGGAGACAGCTGGTGACACTCTA  400

seq1  AACAGAAAAGAGACAGAGAGAAACAGAGATCCATCTGTGCAGGCACCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAAAGAGACAGAGAGAAACAGAGATCCATCTGTGCAGGCACCTCA  450

seq1  GCTCAGCTCCCTTTCTTCTACAACTAAGATGGGTAAAAATAAAAGAACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGCTCCCTTTCTTCTACAACTAAGATGGGTAAAAATAAAAGAACAT  500

seq1  CATCAAGATATTGCCCCCGGGCCCCCAGTCAGACTCTGAGGCCCATCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAGATATTGCCCCCGGGCCCCCAGTCAGACTCTGAGGCCCATCTCC  550

seq1  CATGTGAGTCTCGATCCTGTCAAACTGGTAATTAACAGCAACAATCACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGAGTCTCGATCCTGTCAAACTGGTAATTAACAGCAACAATCACAG  600

seq1  CTCCACTCCTTGTCAAGCTGACAACCAAACACATCACTTTAAATCCATAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACTCCTTGTCAAGCTGACAACCAAACACATCACTTTAAATCCATAG  650

seq1  TCTTCTCTACCCCCTATAGCCTTATGACCATGTTATAAGGTAAAATGCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCTACCCCCTATAGCCTTATGACCATGTTATAAGGTAAAATGCAT  700

seq1  TCAACCCC--AACGTTTTTTCTTATCTAGGACTTT  733
      ||||||||  |||| ||||||||||||||||||||
seq2  TCAACCCCCAAACG-TTTTTCTTATCTAGGACTTT  734

seq1: chr16_95430520_95430617
seq2: B6Ng01-132J03.g_75_172 (reverse)

seq1  TCTCCCTCTCCCTCTCCCTCTCCCTCTCCGTCAAATCATTCACTGAACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTCTCCCTCTCCCTCTCCCTCTCCGTCAAATCATTCACTGAACAC  50

seq1  ACACAGCACTGGCACCCTGTGATGCCCCTGGCTCACCTCTGTGAGTGA  98
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGCACTGGCACCCTGTGATGCCCCTGGCTCACCTCTGTGAGTGA  98