BAC Information

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BAC

Clone NameB6Ng01-132O05
Chromosome16 (Build37)
Map Location 81,993,623 - 81,994,546
singlet/doubletsinglet
Overlap genenone
Upstream geneNcam2, LOC621470, LOC435484, Pgk1-ps1
Downstream geneEG665260
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132O05.bB6Ng01-132O05.g
ACCDH933579DH933580
length1,238941
definitionDH933579|Mus musculus domesticus DNA, BAC clone: B6Ng01-132O05, 5' end.DH933580|Mus musculus domesticus DNA, BAC clone: B6Ng01-132O05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttataagaacaccaaactattcagccataacttatatgcagagg
acccaggtcagacccttacaggctccataaccactaaaagttcacatgac
ttccagtcagttgattctgtgttccaggttctcttggtgtgtccctgacc
actctggttgctcagatccttctgttcccttcaccacaggaccagagctg
ggcctaatgtttggctgtgtgactcttcaatgaagtgtttctggactctt
tgatgacaaatgtgctattgtgtggtctgagaatactgtgcaggcaggac
aaactttaggttgaaggtttgtggctgagttatggcccagctgaagcctt
gcctgattacaaaagacagctggtgcattctgcctgtccagcattactaa
tgttgctctaatagattccacaaggtttccatttcacgaaatttccaact
tgcctcctaaatacctctaattccagccatttctcttggtattgtatcca
tccttccataaatctgatcactcctgttctcaagcctatctttcatctgt
ataccccaaaattttatttctctccccttcccagggagattcttgattac
cccaatcacccgttcttgttacttagtctcttgagtctgtagatcataac
atgattgtggtttttttatgagtttaattatttttatacattttacttcc
aatcacagcccacctatctcatcccctcccagtcacaccctctcactccc
tttctcccattttcttctctgctcccccccccttttttttaaaagaagcc
attgccctccattcccaggtaccaattcaccctgacatatgaagcatcta
ctggactatgtccatcgtttcccactgaggccagacaagacagcccacct
agggaaaaacagttcaaaggcagacaacacagtctgagtcatagacagtc
tctgatccaattgttggggactcacatgaagacacgtgtacatctgccac
atattttaggggcttagtttagcccatacctgctctttggtggtggtcat
tctctgtgagaattcatgggcccaggttttgggctaatagtttattgtgg
ttctgacctctttcccaatctccctgaacctttcccagagacgttgacct
ggctaacgttggttggatttcgccttcgttctacatctgatagtttccaa
ggtggctagcttatggatcgcagccaatcgcgaatact
gaattccttctttacctttgtttgttttgcttaataattagtgtctctca
ttggtatctaatgtgaatttattatatatgctactgaaaatatttatctc
ttctgagtctgttgtaatttttggtggagacttctcagatcttatatatg
gaattacactgacataatgaaatactttgagctcttttcctgcttatatt
ctttaatttcccttattctacaaatatcttcaaatgctatacagaataga
aatattaatgtgggtacatctgaccttagtggagatattttgagtttctc
tagcagcatgtaacatatatacttcttatgaattaggacttgaagggaaa
atgaaacaacaggttaatttttgacagggtgtttacaaatatgtgagaca
gcaggcaggatgttctagggctaggtaaaacattccattctgcatggaag
ccacaacaagacaagaagtaagaaagacaaaatagctgcaaaagacctag
aaactagcccagttctctagggccctttccgctcaagagtctataagcag
gaaaacctactgaaagccattctcagttgaaccaagctgcaaagaagatt
ctcagacaatctgagtagcctggaaaaagatgaattctaaatacttggta
gataccatgaccagatctgaggcttggggaaggctctgaccggccaagca
acatggagaagacactgtccaacctgctaagctatctgcagcctgtatag
tgtgttccagctatcagtctttggtgagctgtcattcattcccctatgag
ctttgtgtatgcagttgtgtttgcattatttttctctcataagtagccct
caactacatttcctaaggaagcctcaaataaaatttattggttcatcagt
tatacactggtgtgattacaaacagttctgtgtttggggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_81993623_81994546
seq2: B6Ng01-132O05.g_67_990

seq1  GAATTCCTTCTTTACCTTTGTTTGTTTTGCTTAATAATTAGTGTCTCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCTTTACCTTTGTTTGTTTTGCTTAATAATTAGTGTCTCTCA  50

seq1  TTGGTATCTAATGTGAATTTATTATATATGCTACTGAAAATATTTATCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTATCTAATGTGAATTTATTATATATGCTACTGAAAATATTTATCTC  100

seq1  TTCTGAGTCTGTTGTAATTTTTGGTGGAGACTTCTCAGATCTTATATATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGTCTGTTGTAATTTTTGGTGGAGACTTCTCAGATCTTATATATG  150

seq1  GAATTACACTGACATAATGAAATACTTTGAGCTCTTTTCCTGCTTATATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTACACTGACATAATGAAATACTTTGAGCTCTTTTCCTGCTTATATT  200

seq1  CTTTAATTTCCCTTATTCTACAAATATCTTCAAATGCTATACAGAATAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATTTCCCTTATTCTACAAATATCTTCAAATGCTATACAGAATAGA  250

seq1  AATATTAATGTGGGTACATCTGACCTTAGTGGAGATATTTTGAGTTTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTAATGTGGGTACATCTGACCTTAGTGGAGATATTTTGAGTTTCTC  300

seq1  TAGCAGCATGTAACATATATACTTCTTATGAATTAGGACTTGAAGGGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGCATGTAACATATATACTTCTTATGAATTAGGACTTGAAGGGAAA  350

seq1  ATGAAACAACAGGTTAATTTTTGACAGGGTGTTTACAAATATGTGAGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAACAACAGGTTAATTTTTGACAGGGTGTTTACAAATATGTGAGACA  400

seq1  GCAGGCAGGATGTTCTAGGGCTAGGTAAAACATTCCATTCTGCATGGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCAGGATGTTCTAGGGCTAGGTAAAACATTCCATTCTGCATGGAAG  450

seq1  CCACAACAAGACAAGAAGTAAGAAAGACAAAATAGCTGCAAAAGACCTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAACAAGACAAGAAGTAAGAAAGACAAAATAGCTGCAAAAGACCTAG  500

seq1  AAACTAGCCCAGTTCTCTAGGGCCCTTTCCGCTCAAGAGTCTATAAGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAGCCCAGTTCTCTAGGGCCCTTTCCGCTCAAGAGTCTATAAGCAG  550

seq1  GAAAACCTACTGAAAGCCATTCTCAGTTGAACCAAGCTGCAAAGAAGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACCTACTGAAAGCCATTCTCAGTTGAACCAAGCTGCAAAGAAGATT  600

seq1  CTCAGACAATCTGAGTAGCCTGGAAAAAGATGAATTCTAAATACTTGGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGACAATCTGAGTAGCCTGGAAAAAGATGAATTCTAAATACTTGGTA  650

seq1  GATACCATGACCAGATCTGAGGCTTGGGGAAGGCTCTGACCGGCCAAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCATGACCAGATCTGAGGCTTGGGGAAGGCTCTGACCGGCCAAGCA  700

seq1  ACATGGAGAAGACACTGTCCAACCTGCTAAGCTATCTGCAGCCTGTATAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGAGAAGACACTGTCCAACCTGCTAAGCTATCTGCAGCCTGTATAG  750

seq1  TGTGTTCCAGCTATCAGTCTTTGGTGAGCTGTCATTCATTCCCCTATGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCCAGCTATCAGTCTTTGGTGAGCTGTCATTCATTCCCCTATGAG  800

seq1  CTTTGTGTATGCAGTTGTGTTTGCATTATTTTTCTCTCATAAGTAGCCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGTATGCAGTTGTGTTTGCATTATTTTTCTCTCATAAGTAGCCCT  850

seq1  CAACTACATTTCCTAAGGAAGCCTCAAATAAAATTTATTGGTTCATCAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTACATTTCCTAAGGAAGCCTCAAATAAAATTTATTGGTTCATCAGT  900

seq1  TATACACTGGTGTGATTACAAACA  924
      ||||||||||||||||||||||||
seq2  TATACACTGGTGTGATTACAAACA  924