BAC Information

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BAC

Clone NameB6Ng01-133C07
Chromosome16 (Build37)
Map Location 66,096,986 - 66,098,164
singlet/doubletsinglet
Overlap genenone
Upstream geneHtr1f, LOC672931, Pou1f1, Chmp2b, EG383186, Vgll3, LOC664846
Downstream geneLOC100039035, Cadm2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133C07.bB6Ng01-133C07.g
ACCDH933770DH933771
length1,2011,157
definitionDH933770|Mus musculus domesticus DNA, BAC clone: B6Ng01-133C07, 5' end.DH933771|Mus musculus domesticus DNA, BAC clone: B6Ng01-133C07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattctttttaatagctgagtagtactccattgtgtaaatgtacc
acattttttgtatccattccactcttgaggggaatctgggttctttccag
cttctggctattataaataaggctgctatgaacatagtggagcatgtgtc
cttcttaccggttgggacatcttctggatatacgcccaggagaggtattg
ctggatcctccggtagtactatgtccaattttcgggggaaccgccagacg
gattttcagagtggttgtaccagcttgcaatcccaccaacgatggaggaa
tgttcctctttctccacatcctcgccagcatctgctgtcacctgaatttt
tgatcttagccattctgactggtgtgagatggaatctcagggttgttttg
atttgcatttctttgatgattaaggatgttgaacttttttcaggtgtttc
tcagcctttcggtattcctcgggtgagaattctttgttcagctctgagac
ccatcttttaatggggctatttgattttctggagtccaccctcttgagtt
ctttgtatatattggatattagtcccctatctgatttaagataggtaaag
atcctttcccaatctgttggtggtctttttgtcttattgacagtgtcttt
tgcgttgcagaaactttgcagtttcatgaggtcccatttgtcaatcctcg
atcttaaagcacaagccattattgttctattcaggaattttttccctgtg
cccatatcttcgagacttcccccactttctcctctataagtttcagtgtc
tctggttttatgtgaagttccttgatccacttagatttgaccttagtaga
agaagagaggaatgggtcgatttgcattcttctacatgataacaaccagt
tgtgccagcaccaattgttgaaaatgctgtctttttccactggatggttt
tagctcccttgtcgaagatcaagtgaccataggtgtgtgggtcatttctg
ggtcttcaatctatccattgtttactgtctgtcactataccagtaccatg
cagtttttatcaaaatgctccttgagtctcagtccgcgccgattggatga
agcagatgttgggttcctctcaccggaatcttaaatgctgaaggtgttgg
atagattgccgatgtcaaagagactgtgagccctatctacccccagtcgc
t
gaattcaacagcagatgaggattcacaaccttccctctttcccccattat
gtatcaacacaaccacacaaatgagtgggaaaaaatatacagaacaacct
gagagttatgaattagcagcaaagttcagataaagaatcagaaatgacaa
ccggggactcaaaaagtagaaatgaacatgatgtctcattgactcaggca
ttcctttgacatctggatcagcgagtcagacataatataaaccatagcaa
tgatttaatttttccataactagttagcagtgtttctgagttgctattgt
tgaattaccatgtctcagtcataaacatgttgtgactctttgtcctctca
attacattaggaacattgtttagaaagggaaataaggtaggttccaacta
aaagtggagtgccatattgaatatgatggcccacatcctgtttcaaattt
ctatcttgtaatgttgttagtaattagataatttctacaagagaaagtct
taacaaactatatgttctaaaaagtgctttaagtttctgtttatttttgt
gaggataagtcaaacaaaaccaacaagacacagggatatgttgttctcaa
tattaatatatactttataaaaatccgttaagttctcttgcttttaattc
agtcgatttttccttttttccccctgaggaataaagaatttcaatatggt
tattactaagttgtctgcatagacttgaagcatcttgaacaggaaggtat
caattgatcctctgatttgcttatagctcccatacaagtcatttacaatc
tacagcatcacatgactcttctgaggacggtttgttgccgtcataagggc
aagtcagatctacagactttcaatattttcacagcatgttctcattaact
tggagtgtgcgtgtataaaatactttgcttacacctaagtcactgtgtaa
tagagaatttggggatcactttgaaattatgataatttggtattgttata
tgctaggagtctatatacttgtaatatttctcagtctctacttaaaataa
aattaagagaaagtaagaaatatattggctcagaatctctcgaaccttcc
atctgtatgtgagcaaagaaactgctcattaagatagattcctattgcac
aaagaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_66096986_66098164
seq2: B6Ng01-133C07.g_67_1223

seq1  GAATTCAACAGCAGATGAGGATTCACAACCTTCCCTCTTTCCCCCATTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAGCAGATGAGGATTCACAACCTTCCCTCTTTCCCCCATTAT  50

seq1  GTATCAACACAACCACACAAATGAGTGGGAAAAAATATACAGAACAACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAACACAACCACACAAATGAGTGGGAAAAAATATACAGAACAACCT  100

seq1  GAGAGTTATGAATTAGCAGCAAAGTTCAGATAAAGAATCAGAAATGACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTTATGAATTAGCAGCAAAGTTCAGATAAAGAATCAGAAATGACAA  150

seq1  CCGGGGACTCAAAAAGTAGAAATGAACATGATGTCTCATTGACTCAGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGGACTCAAAAAGTAGAAATGAACATGATGTCTCATTGACTCAGGCA  200

seq1  TTCCTTTGACATCTGGATCAGCGAGTCAGACATAATATAAACCATAGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTGACATCTGGATCAGCGAGTCAGACATAATATAAACCATAGCAA  250

seq1  TGATTTAATTTTTCCATAACTAGTTAGCAGTGTTTCTGAGTTGCTATTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTAATTTTTCCATAACTAGTTAGCAGTGTTTCTGAGTTGCTATTGT  300

seq1  TGAATTACCATGTCTCAGTCATAAACATGTTGTGACTCTTTGTCCTCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTACCATGTCTCAGTCATAAACATGTTGTGACTCTTTGTCCTCTCA  350

seq1  ATTACATTAGGAACATTGTTTAGAAAGGGAAATAAGGTAGGTTCCAACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATTAGGAACATTGTTTAGAAAGGGAAATAAGGTAGGTTCCAACTA  400

seq1  AAAGTGGAGTGCCATATTGAATATGATGGCCCACATCCTGTTTCAAATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGGAGTGCCATATTGAATATGATGGCCCACATCCTGTTTCAAATTT  450

seq1  CTATCTTGTAATGTTGTTAGTAATTAGATAATTTCTACAAGAGAAAGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTTGTAATGTTGTTAGTAATTAGATAATTTCTACAAGAGAAAGTCT  500

seq1  TAACAAACTATATGTTCTAAAAAGTGCTTTAAGTTTCTGTTTATTTTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAACTATATGTTCTAAAAAGTGCTTTAAGTTTCTGTTTATTTTTGT  550

seq1  GAGGATAAGTCAAACAAAACCAACAAGACACAGGGATATGTTGTTCTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATAAGTCAAACAAAACCAACAAGACACAGGGATATGTTGTTCTCAA  600

seq1  TATTAATATATACTTTATAAAAATCCGTTAAGTTCTCTTGCTTTTAATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATATATACTTTATAAAAATCCGTTAAGTTCTCTTGCTTTTAATTC  650

seq1  AGTCGATTTTTCCTTTTTTCCCCCTGAGGAATAAAGAATTTCAATATGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCGATTTTTCCTTTTTTCCCCCTGAGGAATAAAGAATTTCAATATGGT  700

seq1  TATTACTAAGTTGTCTGCATAGACTTGAAGCATCTTGAACAGGAAGGTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACTAAGTTGTCTGCATAGACTTGAAGCATCTTGAACAGGAAGGTAT  750

seq1  CAATTGATCCTCTGATTTGCTTATAGCTCCCATACAAGTCATTTACAATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGATCCTCTGATTTGCTTATAGCTCCCATACAAGTCATTTACAATC  800

seq1  TACAGCATCACATGACTCTTCTGAGGACGGTTTGTTGCCGTCATAAGGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCATCACATGACTCTTCTGAGGACGGTTTGTTGCCGTCATAAGGGC  850

seq1  AAGTCAGATCTACAGACTTTCAATATTTTCACAGCATGTTCTCATTAACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAGATCTACAGACTTTCAATATTTTCACAGCATGTTCTCATTAACT  900

seq1  TGGAGGTGTGCGTGTATAAAATACTTTGCTTAACACCTAAGTCACTGTGT  950
      |||| |||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGGA-GTGTGCGTGTATAAAATACTTTGCTT-ACACCTAAGTCACTGTGT  948

seq1  AATAGAGAAATTTGGGGAATCACTTTTGAAATTAGGATAATTTGGTAATT  1000
      ||||||| ||||||||| ||||| |||||||||| ||||||||||| |||
seq2  AATAGAG-AATTTGGGG-ATCAC-TTTGAAATTATGATAATTTGGT-ATT  994

seq1  GTTAATATGCTAGGAGTCTAATTATACTTGTAATATTTTCTCAAGTCTCT  1050
      ||| ||||||||||||||||  ||||||||||||| |||||| |||||||
seq2  GTT-ATATGCTAGGAGTCTA--TATACTTGTAATA-TTTCTC-AGTCTCT  1039

seq1  ACTTAAAATAAAAATTAAAGAGAACAGTAAGGAACATATATTGGCTCAGA  1100
      |||||||||||||  | ||||||| ||||||  | |||||||||||||||
seq2  ACTTAAAATAAAA--TTAAGAGAA-AGTAAG--AAATATATTGGCTCAGA  1084

seq1  ATCTCACAGACACTCACATCTGTATGT-AGCAAAGAACACTGGCTCATTA  1149
      ||||| | ||  ||  ||||||||||| ||||||||| ||| ||||||||
seq2  ATCTCTC-GAACCTTCCATCTGTATGTGAGCAAAGAA-ACT-GCTCATTA  1131

seq1  AG-TAGATTTCCTAATTTGCAACAAAAGAAT  1179
      || |||| ||||||  |||||   |||||||
seq2  AGATAGA-TTCCTA--TTGCA--CAAAGAAT  1157