BAC Information

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BAC

Clone NameB6Ng01-134H21
Chromosome16 (Build37)
Map Location 74,162,568 - 74,227,567
singlet/doubletdoublet
Overlap geneRobo2
Upstream geneLOC100039326
Downstream geneLOC665042
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134H21.bB6Ng01-134H21.g
ACCDH934774DH934775
length1,222517
definitionDH934774|Mus musculus domesticus DNA, BAC clone: B6Ng01-134H21, 5' end.DH934775|Mus musculus domesticus DNA, BAC clone: B6Ng01-134H21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,226,327 - 74,227,567)(74,162,568 - 74,163,090)
sequence
gaattcttctgatttgaaaagctcagccactatatagatgccaaggtgat
aattgaacaagagtagaactgaatcttttcccagagtgctttgggttaat
aaaagataacacccctggttgaagaggatccttacaaccaagataaaaaa
tggctttgccaatggaaaacctaaagttggataaagccaaaggttccatt
tacgttgtaaagctttgtcatcctagctttcacaaacattactaatgttt
ctttcttgaaagaatgagaaataaatcagctttgctgccaacactgaggt
aagggtaaattgtcatgttccataatttctgtttctaccatggttcatta
ctgaagttctgcatgtgtataaagttgtctgtctataagtttattcagag
aaagatatccatatggacacagatgctcagaattctgagttcagcctaat
tgtctctaggtgccagtgtattaattctatcagagattggattgaaagat
catcgtcctataatggcagcaaaaggaaaattacaatggtgtattttttt
aaatcagcagactaatagttaaaataatatttaggaactggattttaata
atccacaatgttttttgaaatatcctttgctacaaacttgcctcccaaag
gcagaggatgtaactggtgaggattttgggagctcttttataaatgatga
acatgaggacattggagaaataaaaacggatagcagcagtcaagactcca
tgtccttctcagtagctctgtgtaaataggcattatcaggagcatcttga
catcttaaacctcacttcaattaaagatgatgggaggcattagcattagt
ctgaagtctattatatggtgctgtgttggtggagaagaccaatggacaaa
atcacaaagacagaaggccaatgctactagagctgtcaactgagaggaca
agccagagggttttagggaatgtcaaagaccacaactccagccaggaaga
ataaacctgggattgtatctacatcatgtgtgcatcctggtgattttcta
ggcaaattaaagccatttgacaaacgatccctgaataatacttactacat
cttctaacaaaggccctcaccctcccaagcagccaccctaggctctatgg
aattatttaagtcaacaaatttcacatctgctgggaacttgcaatgaacc
ttcacagctcaactccatattg
agacatagatggcgtttttactaaacatgaaagtttatattttgagtcct
gtttgtgttataatcagtacagggggcagaaccaaagaaacattataggc
aatttccatattaatggatttaatattttcctgtcattgcctacaagtcc
agtgaaaaattccaaatctagagtagagaatgagtattttggatgccttg
aagctctttgtcagattcaacagatgacttaatttttggaacacaaagca
aagttcttgaccctgagcatcacaatcaacctcacacaagtttctcccaa
ttatcgcaactcaccaaaatcatacacataaacaacaatatgagctaccc
agtaccccagagctcctgtctctagctgcatatgcagcagaagatgacct
agtagaccatcacagggaagggaggccccttggtattgcaaactttatat
gccccagtacaggggaacacaagggccaagaagtgggagtgggtgggaag
gggagcagggtgggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_74226327_74227567
seq2: B6Ng01-134H21.b_46_1267 (reverse)

seq1  CAATATGGAGGTTGAGCGTGGAGGGTGCATTGCCAGGTACCCAGCAGGAT  50
      ||||||||| |||||||   || ||| ||||| || || ||||||| |||
seq2  CAATATGGA-GTTGAGCTGTGAAGGTTCATTG-CAAGTTCCCAGCA-GAT  47

seq1  GGGTAGAAATGGTGGACTAGAATAAAT-CATAGGAGCTAAGGGGTGGCTG  99
        ||  || | || ||||  ||||| | |||||   |||  |||||||||
seq2  --GTGAAATTTGTTGACTTAAATAATTCCATAGAGCCTA--GGGTGGCTG  93

seq1  CTTGGGGGGGTGGGGGGCTTTGTTAGGAGATGTAGTTAAGGTATAATTCA  149
      |||||| ||||| ||| ||||||||| |||||||||  | |||| |||||
seq2  CTTGGGAGGGTGAGGGCCTTTGTTAGAAGATGTAGT--AAGTATTATTCA  141

seq1  GGGATCGTTTGTCAAAATGGCTTTAAAATTTGCCTAGAAAATCACCAGGG  199
      ||||||||||||| ||||||||||  ||||||||||||||||||||| ||
seq2  GGGATCGTTTGTC-AAATGGCTTT--AATTTGCCTAGAAAATCACCA-GG  187

seq1  ATGCCACAACATGATGTAGATAACAATCCCAGGTTTATTCTTCCCTGGCT  249
      ||| ||| ||||||||||||| |||||||||||||||||||| |||||||
seq2  ATG-CAC-ACATGATGTAGAT-ACAATCCCAGGTTTATTCTT-CCTGGCT  233

seq1  GGAGTTGTTGGTCTTTTGACATTCCCTAAAACCCTCTGGCTTTGTCCTCT  299
      ||||||| ||||| |||||||||||||||||||||||||| |||||||||
seq2  GGAGTTG-TGGTC-TTTGACATTCCCTAAAACCCTCTGGC-TTGTCCTCT  280

seq1  CAGTTGACAGCTCTAGTAGCATTGGCCTTCTGTCTTTGTGATTTTGTCCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGACAGCTCTAGTAGCATTGGCCTTCTGTCTTTGTGATTTTGTCCA  330

seq1  TTGGTCTTCTCCACCAACACAGCACCATATAATAGACTTCAGACTAATGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCTTCTCCACCAACACAGCACCATATAATAGACTTCAGACTAATGC  380

seq1  TAATGCCTCCCATCATCTTTAATTGAAGTGAGGTTTAAGATGTCAAGATG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCCTCCCATCATCTTTAATTGAAGTGAGGTTTAAGATGTCAAGATG  430

seq1  CTCCTGATAATGCCTATTTACACAGAGCTACTGAGAAGGACATGGAGTCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGATAATGCCTATTTACACAGAGCTACTGAGAAGGACATGGAGTCT  480

seq1  TGACTGCTGCTATCCGTTTTTATTTCTCCAATGTCCTCATGTTCATCATT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGCTGCTATCCGTTTTTATTTCTCCAATGTCCTCATGTTCATCATT  530

seq1  TATAAAAGAGCTCCCAAAATCCTCACCAGTTACATCCTCTGCCTTTGGGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAGAGCTCCCAAAATCCTCACCAGTTACATCCTCTGCCTTTGGGA  580

seq1  GGCAAGTTTGTAGCAAAGGATATTTCAAAAAACATTGTGGATTATTAAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGTTTGTAGCAAAGGATATTTCAAAAAACATTGTGGATTATTAAAA  630

seq1  TCCAGTTCCTAAATATTATTTTAACTATTAGTCTGCTGATTTAAAAAAAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTTCCTAAATATTATTTTAACTATTAGTCTGCTGATTTAAAAAAAT  680

seq1  ACACCATTGTAATTTTCCTTTTGCTGCCATTATAGGACGATGATCTTTCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCATTGTAATTTTCCTTTTGCTGCCATTATAGGACGATGATCTTTCA  730

seq1  ATCCAATCTCTGATAGAATTAATACACTGGCACCTAGAGACAATTAGGCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAATCTCTGATAGAATTAATACACTGGCACCTAGAGACAATTAGGCT  780

seq1  GAACTCAGAATTCTGAGCATCTGTGTCCATATGGATATCTTTCTCTGAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCAGAATTCTGAGCATCTGTGTCCATATGGATATCTTTCTCTGAAT  830

seq1  AAACTTATAGACAGACAACTTTATACACATGCAGAACTTCAGTAATGAAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTATAGACAGACAACTTTATACACATGCAGAACTTCAGTAATGAAC  880

seq1  CATGGTAGAAACAGAAATTATGGAACATGACAATTTACCCTTACCTCAGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTAGAAACAGAAATTATGGAACATGACAATTTACCCTTACCTCAGT  930

seq1  GTTGGCAGCAAAGCTGATTTATTTCTCATTCTTTCAAGAAAGAAACATTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCAGCAAAGCTGATTTATTTCTCATTCTTTCAAGAAAGAAACATTA  980

seq1  GTAATGTTTGTGAAAGCTAGGATGACAAAGCTTTACAACGTAAATGGAAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGTTTGTGAAAGCTAGGATGACAAAGCTTTACAACGTAAATGGAAC  1030

seq1  CTTTGGCTTTATCCAACTTTAGGTTTTCCATTGGCAAAGCCATTTTTTAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGCTTTATCCAACTTTAGGTTTTCCATTGGCAAAGCCATTTTTTAT  1080

seq1  CTTGGTTGTAAGGATCCTCTTCAACCAGGGGTGTTATCTTTTATTAACCC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTTGTAAGGATCCTCTTCAACCAGGGGTGTTATCTTTTATTAACCC  1130

seq1  AAAGCACTCTGGGAAAAGATTCAGTTCTACTCTTGTTCAATTATCACCTT  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCACTCTGGGAAAAGATTCAGTTCTACTCTTGTTCAATTATCACCTT  1180

seq1  GGCATCTATATAGTGGCTGAGCTTTTCAAATCAGAAGAATTC  1241
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCTATATAGTGGCTGAGCTTTTCAAATCAGAAGAATTC  1222

seq1: chr16_74162568_74163090
seq2: B6Ng01-134H21.g_67_589

seq1  GAATTCAGACATAGATGGCGTTTTTACTAAACATGAAAGTTTATATTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGACATAGATGGCGTTTTTACTAAACATGAAAGTTTATATTTTG  50

seq1  AGTCCTGTTTGTGTTATAATCAGTACAGGGGGCAGAACCAAAGAAACATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTGTTTGTGTTATAATCAGTACAGGGGGCAGAACCAAAGAAACATT  100

seq1  ATAGGCAATTTCCATATTAATGGATTTAATATTTTCCTGTCATTGCCTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCAATTTCCATATTAATGGATTTAATATTTTCCTGTCATTGCCTAC  150

seq1  AAGTCCAGTGAAAAATTCCAAATCTAGAGTAGAGAATGAGTATTTTGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCAGTGAAAAATTCCAAATCTAGAGTAGAGAATGAGTATTTTGGAT  200

seq1  GCCTTGAAGCTCTTTGTCAGATTCAACAGATGACTTAATTTTTGGAACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGAAGCTCTTTGTCAGATTCAACAGATGACTTAATTTTTGGAACAC  250

seq1  AAAGCAAAGTTCTTGACCCTGAGCATCACAATCAACCTCACACAAGTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAAGTTCTTGACCCTGAGCATCACAATCAACCTCACACAAGTTTC  300

seq1  TCCCAATTATCGCAACTCACCAAAATCATACACATAAACAACAATATGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATTATCGCAACTCACCAAAATCATACACATAAACAACAATATGAG  350

seq1  CTACCCAGTACCCCAGAGCTCCTGTCTCTAGCTGCATATGCAGCAGAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCAGTACCCCAGAGCTCCTGTCTCTAGCTGCATATGCAGCAGAAGA  400

seq1  TGACCTAGTAGACCATCACAGGGAAGGGAGGCCCCTTGGTATTGCAAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTAGTAGACCATCACAGGGAAGGGAGGCCCCTTGGTATTGCAAACT  450

seq1  TTATATGCCCCAGTACAGGGGAACACAAGGGCCAAGAAGTGGGAGTGGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATGCCCCAGTACAGGGGAACACAAGGGCCAAGAAGTGGGAGTGGGT  500

seq1  GGGAAGGGGAGCAGGGTGGGGGG  523
      |||||||||||||||||||||||
seq2  GGGAAGGGGAGCAGGGTGGGGGG  523